RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 CDC45O75419 566 aa17.78■□□□□ 0.44
KDM1B-201ENST00000297792 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
KDM1B-201ENST00000297792 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
KDM1B-201ENST00000297792 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
KDM1B-201ENST00000297792 GLIPR1L2Q4G1C9 344 aa17.77■□□□□ 0.44
KDM1B-201ENST00000297792 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
KDM1B-201ENST00000297792 RBM25P49756 843 aaKnown RBP17.77■□□□□ 0.44
KDM1B-201ENST00000297792 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.43
KDM1B-201ENST00000297792 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
KDM1B-201ENST00000297792 MSNP26038 577 aaKnown RBP17.76■□□□□ 0.43
KDM1B-201ENST00000297792 PPLO60437 1756 aa17.76■□□□□ 0.43
KDM1B-201ENST00000297792 VAMP4O75379 141 aa17.76■□□□□ 0.43
KDM1B-201ENST00000297792 GCC1Q96CN9 775 aa17.76■□□□□ 0.43
KDM1B-201ENST00000297792 RAB3GAP1Q15042 981 aa17.76■□□□□ 0.43
KDM1B-201ENST00000297792 PKP1Q13835 747 aa17.75■□□□□ 0.43
KDM1B-201ENST00000297792 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
KDM1B-201ENST00000297792 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
KDM1B-201ENST00000297792 FCHSD2O94868 740 aa17.75■□□□□ 0.43
KDM1B-201ENST00000297792 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
KDM1B-201ENST00000297792 POLKQ9UBT6 870 aa17.75■□□□□ 0.43
KDM1B-201ENST00000297792 TSHZ3Q63HK5 1081 aa17.75■□□□□ 0.43
KDM1B-201ENST00000297792 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 MPNDQ8N594 471 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 PRPF40AO75400 957 aaKnown RBP17.74■□□□□ 0.43
KDM1B-201ENST00000297792 GNAI1P63096 354 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 SIRT2Q8IXJ6 389 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 MRPL50Q8N5N7 158 aaKnown RBP17.74■□□□□ 0.43
KDM1B-201ENST00000297792 RNF214Q8ND24 703 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 LMTK2Q8IWU2 1503 aa17.74■□□□□ 0.43
KDM1B-201ENST00000297792 SKOR2Q2VWA4 1001 aaPredicted RBP17.73■□□□□ 0.43
KDM1B-201ENST00000297792 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
KDM1B-201ENST00000297792 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
KDM1B-201ENST00000297792 SNX21Q969T3 373 aa17.73■□□□□ 0.43
KDM1B-201ENST00000297792 CHMP4BQ9H444 224 aaKnown RBP17.73■□□□□ 0.43
KDM1B-201ENST00000297792 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
KDM1B-201ENST00000297792 BAG4O95429 457 aaKnown RBP17.72■□□□□ 0.43
KDM1B-201ENST00000297792 KIF2CQ99661 725 aa17.72■□□□□ 0.43
KDM1B-201ENST00000297792 NSD2O96028 1365 aa17.72■□□□□ 0.43
KDM1B-201ENST00000297792 SETBP1Q9Y6X0 1596 aa17.72■□□□□ 0.43
KDM1B-201ENST00000297792 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
KDM1B-201ENST00000297792 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
KDM1B-201ENST00000297792 GSPT1P15170 499 aaKnown RBP17.71■□□□□ 0.43
KDM1B-201ENST00000297792 RBM10P98175 930 aaKnown RBP17.71■□□□□ 0.43
KDM1B-201ENST00000297792 CASC1Q6TDU7 716 aa17.71■□□□□ 0.43
KDM1B-201ENST00000297792 ZGPATQ8N5A5 531 aaKnown RBP17.71■□□□□ 0.43
KDM1B-201ENST00000297792 MCM10Q7L590 875 aa17.71■□□□□ 0.43
KDM1B-201ENST00000297792 MYO3AQ8NEV4 1616 aa17.71■□□□□ 0.43
KDM1B-201ENST00000297792 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
KDM1B-201ENST00000297792 CIZ1Q9ULV3 898 aaPredicted RBP17.7■□□□□ 0.42
KDM1B-201ENST00000297792 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
KDM1B-201ENST00000297792 IL16Q14005 1332 aa17.7■□□□□ 0.42
KDM1B-201ENST00000297792 KIAA1211Q6ZU35 1233 aa17.69■□□□□ 0.42
KDM1B-201ENST00000297792 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
KDM1B-201ENST00000297792 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
KDM1B-201ENST00000297792 PLEKHM2Q8IWE5 1019 aa17.68■□□□□ 0.42
KDM1B-201ENST00000297792 MYO5BQ9ULV0 1848 aa17.68■□□□□ 0.42
KDM1B-201ENST00000297792 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
KDM1B-201ENST00000297792 SULT6B1Q6IMI4 303 aa17.67■□□□□ 0.42
KDM1B-201ENST00000297792 COG3Q96JB2 828 aa17.67■□□□□ 0.42
KDM1B-201ENST00000297792 TRIM6-TRIM34B2RNG4 842 aa17.67■□□□□ 0.42
KDM1B-201ENST00000297792 F6X3S4 739 aa17.67■□□□□ 0.42
KDM1B-201ENST00000297792 PTMAP06454 111 aaKnown RBP17.67■□□□□ 0.42
KDM1B-201ENST00000297792 RILPL2Q969X0 211 aa17.67■□□□□ 0.42
KDM1B-201ENST00000297792 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
KDM1B-201ENST00000297792 ST18O60284 1047 aa17.67■□□□□ 0.42
KDM1B-201ENST00000297792 INTS3Q68E01 1043 aaKnown RBP17.66■□□□□ 0.42
KDM1B-201ENST00000297792 R3HCC1Q9Y3T6 440 aaKnown RBP17.66■□□□□ 0.42
KDM1B-201ENST00000297792 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
KDM1B-201ENST00000297792 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
KDM1B-201ENST00000297792 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 RABEP1Q15276 862 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 MEIS3Q99687 375 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 PTPRMP28827 1452 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 SDSP20132 328 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 NEK4P51957 841 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 FAM13BQ9NYF5 915 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 EXOC6BQ9Y2D4 811 aa17.65■□□□□ 0.42
KDM1B-201ENST00000297792 NEURL4Q96JN8 1562 aa17.64■□□□□ 0.41
KDM1B-201ENST00000297792 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
KDM1B-201ENST00000297792 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.41
KDM1B-201ENST00000297792 SYCE3A1L190 88 aa17.64■□□□□ 0.41
KDM1B-201ENST00000297792 DTNBO60941 627 aa17.64■□□□□ 0.41
KDM1B-201ENST00000297792 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
KDM1B-201ENST00000297792 CCDC173Q0VFZ6 552 aa17.64■□□□□ 0.41
KDM1B-201ENST00000297792 TTC22Q5TAA0 569 aa17.64■□□□□ 0.41
KDM1B-201ENST00000297792 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.41
KDM1B-201ENST00000297792 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
KDM1B-201ENST00000297792 NUCB2P80303 420 aa17.62■□□□□ 0.41
KDM1B-201ENST00000297792 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
KDM1B-201ENST00000297792 PTMSP20962 102 aa17.62■□□□□ 0.41
KDM1B-201ENST00000297792 DDIT3P35638 169 aa17.62■□□□□ 0.41
KDM1B-201ENST00000297792 NUDT16Q96DE0 195 aaKnown RBP17.62■□□□□ 0.41
KDM1B-201ENST00000297792 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
KDM1B-201ENST00000297792 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
KDM1B-201ENST00000297792 ANO2Q9NQ90 1003 aa17.62■□□□□ 0.41
KDM1B-201ENST00000297792 PRIM1P49642 420 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms