RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 KRT28Q7Z3Y7 464 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
TMC1-201ENST00000297784 IL13P35225 146 aa8.68□□□□□ -1.02
TMC1-201ENST00000297784 NUDCQ9Y266 331 aa8.68□□□□□ -1.02
TMC1-201ENST00000297784 MED1Q15648 1581 aaPredicted RBP8.68□□□□□ -1.02
TMC1-201ENST00000297784 MAP3K19Q56UN5 1328 aa8.68□□□□□ -1.02
TMC1-201ENST00000297784 SOX12O15370 315 aa8.67□□□□□ -1.02
TMC1-201ENST00000297784 HSP90AB2PQ58FF8 381 aa8.67□□□□□ -1.02
TMC1-201ENST00000297784 IQSEC2Q5JU85 1478 aa8.67□□□□□ -1.02
TMC1-201ENST00000297784 SLIT3O75094 1523 aa8.67□□□□□ -1.02
TMC1-201ENST00000297784 ZNF521Q96K83 1311 aa8.67□□□□□ -1.02
TMC1-201ENST00000297784 PHRF1Q9P1Y6 1649 aaKnown RBP8.67□□□□□ -1.02
TMC1-201ENST00000297784 NHSL1Q5SYE7 1610 aa8.67□□□□□ -1.02
TMC1-201ENST00000297784 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
TMC1-201ENST00000297784 CFAP53Q96M91 514 aa8.67□□□□□ -1.02
TMC1-201ENST00000297784 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
TMC1-201ENST00000297784 TCERG1O14776 1098 aaKnown RBP8.66□□□□□ -1.02
TMC1-201ENST00000297784 NEFMP07197 916 aa8.66□□□□□ -1.02
TMC1-201ENST00000297784 RGPD5Q99666 1765 aa8.66□□□□□ -1.02
TMC1-201ENST00000297784 APAF1O14727 1248 aa8.66□□□□□ -1.02
TMC1-201ENST00000297784 USP19O94966 1318 aa8.65□□□□□ -1.02
TMC1-201ENST00000297784 U2AF1L5P0DN76 240 aaPredicted RBP8.65□□□□□ -1.02
TMC1-201ENST00000297784 MS4A1P11836 297 aa8.65□□□□□ -1.02
TMC1-201ENST00000297784 U2AF1Q01081 240 aaKnown RBP eCLIP8.65□□□□□ -1.02
TMC1-201ENST00000297784 EIF4A2Q14240 407 aaKnown RBP8.65□□□□□ -1.02
TMC1-201ENST00000297784 CDCA7LQ96GN5 454 aa8.65□□□□□ -1.02
TMC1-201ENST00000297784 RGPD2P0DJD1 1756 aa8.65□□□□□ -1.02
TMC1-201ENST00000297784 SBNO1A3KN83 1393 aa8.65□□□□□ -1.03
TMC1-201ENST00000297784 ROBO1Q9Y6N7 1651 aa8.65□□□□□ -1.03
TMC1-201ENST00000297784 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
TMC1-201ENST00000297784 NPHP3Q7Z494 1330 aa8.64□□□□□ -1.03
TMC1-201ENST00000297784 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
TMC1-201ENST00000297784 U2SURPO15042 1029 aaKnown RBP8.64□□□□□ -1.03
TMC1-201ENST00000297784 GCP02774 474 aa8.64□□□□□ -1.03
TMC1-201ENST00000297784 RUNDC1Q96C34 613 aa8.64□□□□□ -1.03
TMC1-201ENST00000297784 DLG5Q8TDM6 1919 aa8.64□□□□□ -1.03
TMC1-201ENST00000297784 COL18A1P39060 1754 aa8.64□□□□□ -1.03
TMC1-201ENST00000297784 SPATA31A3Q5VYP0 1347 aa8.64□□□□□ -1.03
TMC1-201ENST00000297784 HOXC9P31274 260 aa8.63□□□□□ -1.03
TMC1-201ENST00000297784 TCP11L2Q8N4U5 519 aa8.63□□□□□ -1.03
TMC1-201ENST00000297784 SPINK5Q9NQ38 1064 aaPredicted RBP8.63□□□□□ -1.03
TMC1-201ENST00000297784 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
TMC1-201ENST00000297784 PHACTR3Q96KR7 559 aa8.63□□□□□ -1.03
TMC1-201ENST00000297784 FLT4P35916 1363 aa8.63□□□□□ -1.03
TMC1-201ENST00000297784 HMOX1P09601 288 aa8.63□□□□□ -1.03
TMC1-201ENST00000297784 ABCA3Q99758 1704 aa8.63□□□□□ -1.03
TMC1-201ENST00000297784 FCHSD2O94868 740 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 GSE1Q14687 1217 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 RRP7AQ9Y3A4 280 aaKnown RBP8.62□□□□□ -1.03
TMC1-201ENST00000297784 KIF24Q5T7B8 1368 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 BACH2Q9BYV9 841 aa8.62□□□□□ -1.03
TMC1-201ENST00000297784 LMOD2Q6P5Q4 547 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 WWC1Q8IX03 1113 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 TRMT2AQ8IZ69 625 aaKnown RBP8.61□□□□□ -1.03
TMC1-201ENST00000297784 KCNH5Q8NCM2 988 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 PDE4AP27815 886 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 IP6K1Q92551 441 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
TMC1-201ENST00000297784 PRKAR2BP31323 418 aa8.6□□□□□ -1.03
TMC1-201ENST00000297784 AMPHP49418 695 aa8.6□□□□□ -1.03
TMC1-201ENST00000297784 EYA1Q99502 592 aa8.6□□□□□ -1.03
TMC1-201ENST00000297784 KDRP35968 1356 aa8.6□□□□□ -1.03
TMC1-201ENST00000297784 NEUROD2Q15784 382 aa8.6□□□□□ -1.03
TMC1-201ENST00000297784 BRPF3Q9ULD4 1205 aa8.6□□□□□ -1.03
TMC1-201ENST00000297784 LAS1LQ9Y4W2 734 aaKnown RBP8.6□□□□□ -1.03
TMC1-201ENST00000297784 RTL1A6NKG5 1358 aa8.6□□□□□ -1.03
TMC1-201ENST00000297784 TMPOP42166 694 aaKnown RBP8.59□□□□□ -1.03
TMC1-201ENST00000297784 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.03
TMC1-201ENST00000297784 AHDC1Q5TGY3 1603 aaPredicted RBP8.59□□□□□ -1.03
TMC1-201ENST00000297784 CCDC27Q2M243 656 aa8.59□□□□□ -1.03
TMC1-201ENST00000297784 DUSP27Q5VZP5 1158 aa8.59□□□□□ -1.03
TMC1-201ENST00000297784 SULT6B1Q6IMI4 303 aa8.59□□□□□ -1.03
TMC1-201ENST00000297784 FAM43AQ8N2R8 423 aa8.59□□□□□ -1.03
TMC1-201ENST00000297784 PDE3BQ13370 1112 aa8.59□□□□□ -1.03
TMC1-201ENST00000297784 CAMTA1Q9Y6Y1 1673 aa8.59□□□□□ -1.04
TMC1-201ENST00000297784 ZC3H6P61129 1189 aaKnown RBP8.58□□□□□ -1.04
TMC1-201ENST00000297784 SLFN5Q08AF3 891 aa8.58□□□□□ -1.04
TMC1-201ENST00000297784 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
TMC1-201ENST00000297784 LMO7Q8WWI1 1683 aa8.58□□□□□ -1.04
TMC1-201ENST00000297784 ARHGEF10O15013 1369 aa8.58□□□□□ -1.04
TMC1-201ENST00000297784 NBPF6Q5VWK0 638 aa8.58□□□□□ -1.04
TMC1-201ENST00000297784 NBPF4Q96M43 638 aa8.58□□□□□ -1.04
TMC1-201ENST00000297784 COL16A1Q07092 1604 aaPredicted RBP8.57□□□□□ -1.04
TMC1-201ENST00000297784 GOLGA2Q08379 1002 aa8.57□□□□□ -1.04
TMC1-201ENST00000297784 COL22A1Q8NFW1 1626 aaPredicted RBP8.57□□□□□ -1.04
TMC1-201ENST00000297784 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
TMC1-201ENST00000297784 RIPK4P57078 832 aa8.57□□□□□ -1.04
TMC1-201ENST00000297784 NGEFQ8N5V2 710 aa8.57□□□□□ -1.04
TMC1-201ENST00000297784 LTV1Q96GA3 475 aaPredicted RBP8.57□□□□□ -1.04
TMC1-201ENST00000297784 PHLPP1O60346 1717 aa8.56□□□□□ -1.04
TMC1-201ENST00000297784 CPDO75976 1380 aa8.56□□□□□ -1.04
TMC1-201ENST00000297784 LRRC59Q96AG4 307 aaKnown RBP8.56□□□□□ -1.04
TMC1-201ENST00000297784 KIAA0232Q92628 1395 aa8.56□□□□□ -1.04
TMC1-201ENST00000297784 NFKBIBQ15653 356 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms