RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SPATA31D1Q6ZQQ2 1576 aa18.35■□□□□ 0.53
SPIDR-201ENST00000297423 CBX1P83916 185 aa18.35■□□□□ 0.53
SPIDR-201ENST00000297423 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-201ENST00000297423 IGSF3O75054 1194 aa18.34■□□□□ 0.53
SPIDR-201ENST00000297423 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
SPIDR-201ENST00000297423 MTHFSP49914 203 aa18.34■□□□□ 0.53
SPIDR-201ENST00000297423 CHAMP1Q96JM3 812 aa18.34■□□□□ 0.53
SPIDR-201ENST00000297423 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-201ENST00000297423 NSD3Q9BZ95 1437 aa18.34■□□□□ 0.53
SPIDR-201ENST00000297423 RUNDC1Q96C34 613 aa18.33■□□□□ 0.53
SPIDR-201ENST00000297423 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.53
SPIDR-201ENST00000297423 CARD14Q9BXL6 1004 aa18.33■□□□□ 0.52
SPIDR-201ENST00000297423 NOB1Q9ULX3 412 aaKnown RBP18.33■□□□□ 0.52
SPIDR-201ENST00000297423 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
SPIDR-201ENST00000297423 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
SPIDR-201ENST00000297423 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
SPIDR-201ENST00000297423 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
SPIDR-201ENST00000297423 K7ELQ4 463 aaPredicted RBP18.32■□□□□ 0.52
SPIDR-201ENST00000297423 SYCE3A1L190 88 aa18.31■□□□□ 0.52
SPIDR-201ENST00000297423 OFD1O75665 1012 aa18.31■□□□□ 0.52
SPIDR-201ENST00000297423 GAS2L2Q8NHY3 880 aa18.31■□□□□ 0.52
SPIDR-201ENST00000297423 DDX19BQ9UMR2 479 aa18.31■□□□□ 0.52
SPIDR-201ENST00000297423 TMEM57Q8N5G2 664 aa18.3■□□□□ 0.52
SPIDR-201ENST00000297423 ZNF830Q96NB3 372 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-201ENST00000297423 BAG4O95429 457 aaKnown RBP18.29■□□□□ 0.52
SPIDR-201ENST00000297423 MYO5BQ9ULV0 1848 aa18.29■□□□□ 0.52
SPIDR-201ENST00000297423 CD2BP2O95400 341 aaKnown RBP18.29■□□□□ 0.52
SPIDR-201ENST00000297423 KIAA2012Q0VF49 1180 aa18.29■□□□□ 0.52
SPIDR-201ENST00000297423 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
SPIDR-201ENST00000297423 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
SPIDR-201ENST00000297423 PTMSP20962 102 aa18.28■□□□□ 0.52
SPIDR-201ENST00000297423 JARID2Q92833 1246 aaPredicted RBP18.28■□□□□ 0.52
SPIDR-201ENST00000297423 ALKQ9UM73 1620 aa18.28■□□□□ 0.52
SPIDR-201ENST00000297423 ZNF521Q96K83 1311 aa18.28■□□□□ 0.52
SPIDR-201ENST00000297423 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
SPIDR-201ENST00000297423 TRIM27P14373 513 aa18.27■□□□□ 0.51
SPIDR-201ENST00000297423 RIPK4P57078 832 aa18.27■□□□□ 0.51
SPIDR-201ENST00000297423 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.51
SPIDR-201ENST00000297423 NPC1L1Q9UHC9 1359 aa18.27■□□□□ 0.51
SPIDR-201ENST00000297423 SPDYE4A6NLX3 237 aa18.26■□□□□ 0.51
SPIDR-201ENST00000297423 LTKP29376 864 aa18.26■□□□□ 0.51
SPIDR-201ENST00000297423 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
SPIDR-201ENST00000297423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.513e-6■■■□□ 16.7
SPIDR-201ENST00000297423 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
SPIDR-201ENST00000297423 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
SPIDR-201ENST00000297423 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
SPIDR-201ENST00000297423 RBSNQ9H1K0 784 aa18.25■□□□□ 0.51
SPIDR-201ENST00000297423 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
SPIDR-201ENST00000297423 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
SPIDR-201ENST00000297423 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
SPIDR-201ENST00000297423 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
SPIDR-201ENST00000297423 RAB3GAP1Q15042 981 aa18.24■□□□□ 0.51
SPIDR-201ENST00000297423 NINLQ9Y2I6 1382 aa18.24■□□□□ 0.51
SPIDR-201ENST00000297423 ZSCAN23Q3MJ62 389 aa18.24■□□□□ 0.51
SPIDR-201ENST00000297423 CHD1LQ86WJ1 897 aa18.24■□□□□ 0.51
SPIDR-201ENST00000297423 METP08581 1390 aa18.24■□□□□ 0.51
SPIDR-201ENST00000297423 WASLO00401 505 aaPredicted RBP18.23■□□□□ 0.51
SPIDR-201ENST00000297423 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
SPIDR-201ENST00000297423 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
SPIDR-201ENST00000297423 PKP1Q13835 747 aa18.22■□□□□ 0.51
SPIDR-201ENST00000297423 CSPP1Q1MSJ5 1256 aa18.22■□□□□ 0.51
SPIDR-201ENST00000297423 C17orf53Q8N3J3 647 aaPredicted RBP18.21■□□□□ 0.51
SPIDR-201ENST00000297423 CDK11BP21127 795 aaKnown RBP18.21■□□□□ 0.51
SPIDR-201ENST00000297423 ANKLE2Q86XL3 938 aa18.21■□□□□ 0.51
SPIDR-201ENST00000297423 GDPD2Q9HCC8 539 aa18.21■□□□□ 0.51
SPIDR-201ENST00000297423 MYO3AQ8NEV4 1616 aa18.21■□□□□ 0.5
SPIDR-201ENST00000297423 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
SPIDR-201ENST00000297423 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
SPIDR-201ENST00000297423 AMOTL2Q9Y2J4 779 aa18.2■□□□□ 0.5
SPIDR-201ENST00000297423 KLHL40Q2TBA0 621 aa18.2■□□□□ 0.5
SPIDR-201ENST00000297423 NUDT16Q96DE0 195 aaKnown RBP18.2■□□□□ 0.5
SPIDR-201ENST00000297423 NUCB2P80303 420 aa18.19■□□□□ 0.5
SPIDR-201ENST00000297423 ZNF771Q7L3S4 317 aaPredicted RBP18.19■□□□□ 0.5
SPIDR-201ENST00000297423 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
SPIDR-201ENST00000297423 PTPRMP28827 1452 aa18.19■□□□□ 0.5
SPIDR-201ENST00000297423 CASC1Q6TDU7 716 aa18.18■□□□□ 0.5
SPIDR-201ENST00000297423 SMC5Q8IY18 1101 aa18.18■□□□□ 0.5
SPIDR-201ENST00000297423 CHMP3Q9Y3E7 222 aa18.18■□□□□ 0.5
SPIDR-201ENST00000297423 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
SPIDR-201ENST00000297423 A0A1W2PP64 1363 aa18.18■□□□□ 0.5
SPIDR-201ENST00000297423 PLEKHG1Q9ULL1 1385 aa18.18■□□□□ 0.5
SPIDR-201ENST00000297423 C14orf37Q86TY3 774 aa18.18■□□□□ 0.5
SPIDR-201ENST00000297423 ZGPATQ8N5A5 531 aaKnown RBP18.18■□□□□ 0.5
SPIDR-201ENST00000297423 ST18O60284 1047 aa18.17■□□□□ 0.5
SPIDR-201ENST00000297423 KIF16BQ96L93 1317 aa18.17■□□□□ 0.5
SPIDR-201ENST00000297423 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
SPIDR-201ENST00000297423 TBX22Q9Y458 520 aa18.17■□□□□ 0.5
SPIDR-201ENST00000297423 ARHGEF28Q8N1W1 1705 aaKnown RBP18.17■□□□□ 0.5
SPIDR-201ENST00000297423 CHAF1AQ13111 956 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-201ENST00000297423 NSD2O96028 1365 aa18.16■□□□□ 0.5
SPIDR-201ENST00000297423 SASS6Q6UVJ0 657 aa18.15■□□□□ 0.5
SPIDR-201ENST00000297423 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
SPIDR-201ENST00000297423 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
SPIDR-201ENST00000297423 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
SPIDR-201ENST00000297423 SPC24Q8NBT2 197 aa18.15■□□□□ 0.5
SPIDR-201ENST00000297423 ZKSCAN5Q9Y2L8 839 aa18.15■□□□□ 0.5
SPIDR-201ENST00000297423 CDC45O75419 566 aa18.14■□□□□ 0.49
SPIDR-201ENST00000297423 WDR63Q8IWG1 891 aa18.14■□□□□ 0.49
SPIDR-201ENST00000297423 DRC7Q8IY82 874 aa18.14■□□□□ 0.49
SPIDR-201ENST00000297423 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms