RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 ZNF518AQ6AHZ1 1483 aa15.44■□□□□ 0.06
TMEM200A-201ENST00000296978 REC8O95072 547 aa15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 RTF1Q92541 710 aaKnown RBP15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 PLEKHF1Q96S99 279 aa15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 OTUD7AQ8TE49 926 aaPredicted RBP15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 PLXNC1O60486 1568 aa15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 TSHZ3Q63HK5 1081 aa15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 CFAP44Q96MT7 982 aa15.43■□□□□ 0.06
TMEM200A-201ENST00000296978 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 HMMRO75330 724 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 MCCP23508 829 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 MRPL50Q8N5N7 158 aaKnown RBP15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 CHAMP1Q96JM3 812 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 SULT6B1Q6IMI4 303 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 IL16Q14005 1332 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 MCM10Q7L590 875 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 ERBB4Q15303 1308 aa15.42■□□□□ 0.06
TMEM200A-201ENST00000296978 NSD2O96028 1365 aa15.41■□□□□ 0.06
TMEM200A-201ENST00000296978 FBXO31Q5XUX0 539 aaPredicted RBP15.41■□□□□ 0.06
TMEM200A-201ENST00000296978 ZSCAN30Q86W11 494 aa15.41■□□□□ 0.06
TMEM200A-201ENST00000296978 SYCE3A1L190 88 aa15.41■□□□□ 0.06
TMEM200A-201ENST00000296978 RRP9O43818 475 aaKnown RBP15.41■□□□□ 0.06
TMEM200A-201ENST00000296978 ZGPATQ8N5A5 531 aaKnown RBP15.41■□□□□ 0.06
TMEM200A-201ENST00000296978 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
TMEM200A-201ENST00000296978 XPCQ01831 940 aaPredicted RBP15.4■□□□□ 0.06
TMEM200A-201ENST00000296978 ATP7AQ04656 1500 aa15.4■□□□□ 0.06
TMEM200A-201ENST00000296978 NLRP1Q9C000 1473 aa15.4■□□□□ 0.06
TMEM200A-201ENST00000296978 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
TMEM200A-201ENST00000296978 PKP1Q13835 747 aa15.4■□□□□ 0.06
TMEM200A-201ENST00000296978 ABCC1P33527 1531 aa15.4■□□□□ 0.06
TMEM200A-201ENST00000296978 HAP1P54257 671 aaPredicted RBP15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 EXOC6BQ9Y2D4 811 aa15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 SBNO2Q9Y2G9 1366 aa15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 KLHL40Q2TBA0 621 aa15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 TXNDC2Q86VQ3 553 aa15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 CD109Q6YHK3 1445 aa15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 F6X3S4 739 aa15.39■□□□□ 0.05
TMEM200A-201ENST00000296978 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.38■□□□□ 0.05
TMEM200A-201ENST00000296978 ZNF428Q96B54 188 aa15.38■□□□□ 0.05
TMEM200A-201ENST00000296978 STK31Q9BXU1 1019 aa15.38■□□□□ 0.05
TMEM200A-201ENST00000296978 PLEKHM2Q8IWE5 1019 aa15.38■□□□□ 0.05
TMEM200A-201ENST00000296978 SDSP20132 328 aa15.38■□□□□ 0.05
TMEM200A-201ENST00000296978 IFT57Q9NWB7 429 aa15.38■□□□□ 0.05
TMEM200A-201ENST00000296978 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 ZSCAN23Q3MJ62 389 aa15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 TTC22Q5TAA0 569 aa15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 UPF3BQ9BZI7 483 aaKnown RBP15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 OS9Q13438 667 aaPredicted RBP15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 GDPD2Q9HCC8 539 aa15.37■□□□□ 0.05
TMEM200A-201ENST00000296978 GSPT1P15170 499 aaKnown RBP15.36■□□□□ 0.05
TMEM200A-201ENST00000296978 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
TMEM200A-201ENST00000296978 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
TMEM200A-201ENST00000296978 MEIS3Q99687 375 aa15.36■□□□□ 0.05
TMEM200A-201ENST00000296978 NCKAP5LQ9HCH0 1330 aa15.36■□□□□ 0.05
TMEM200A-201ENST00000296978 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
TMEM200A-201ENST00000296978 LTV1Q96GA3 475 aaPredicted RBP15.36■□□□□ 0.05
TMEM200A-201ENST00000296978 ERC2O15083 957 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 TPM2P07951 284 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 PPIP5K1Q6PFW1 1433 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 ABCA6Q8N139 1617 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 AEBP1Q8IUX7 1158 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 NPATQ14207 1427 aa15.35■□□□□ 0.05
TMEM200A-201ENST00000296978 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
TMEM200A-201ENST00000296978 ZFYVE16Q7Z3T8 1539 aa15.34■□□□□ 0.05
TMEM200A-201ENST00000296978 SYAP1Q96A49 352 aaPredicted RBP15.33■□□□□ 0.05
TMEM200A-201ENST00000296978 KIF2CQ99661 725 aa15.33■□□□□ 0.05
TMEM200A-201ENST00000296978 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.05
TMEM200A-201ENST00000296978 MYOM2P54296 1465 aa15.33■□□□□ 0.04
TMEM200A-201ENST00000296978 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
TMEM200A-201ENST00000296978 ARHGAP45Q92619 1136 aa15.33■□□□□ 0.04
TMEM200A-201ENST00000296978 LARP6Q9BRS8 491 aaKnown RBP15.33■□□□□ 0.04
TMEM200A-201ENST00000296978 USP26Q9BXU7 913 aa15.33■□□□□ 0.04
TMEM200A-201ENST00000296978 RBSNQ9H1K0 784 aa15.33■□□□□ 0.04
TMEM200A-201ENST00000296978 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.04
TMEM200A-201ENST00000296978 KCNJ4P48050 445 aa15.32■□□□□ 0.04
TMEM200A-201ENST00000296978 RPAP2Q8IXW5 612 aaPredicted RBP15.32■□□□□ 0.04
TMEM200A-201ENST00000296978 CEP152O94986 1710 aa15.32■□□□□ 0.04
TMEM200A-201ENST00000296978 DCTPP1Q9H773 170 aa15.31■□□□□ 0.04
TMEM200A-201ENST00000296978 IL1RAPL2Q9NP60 686 aa15.31■□□□□ 0.04
TMEM200A-201ENST00000296978 KIF1BO60333 1816 aa15.31■□□□□ 0.04
TMEM200A-201ENST00000296978 UQCRHLA0A096LP55 91 aa15.31■□□□□ 0.04
TMEM200A-201ENST00000296978 UQCRHP07919 91 aa15.31■□□□□ 0.04
TMEM200A-201ENST00000296978 MYOM1P52179 1685 aa15.31■□□□□ 0.04
TMEM200A-201ENST00000296978 AMPHP49418 695 aa15.3■□□□□ 0.04
TMEM200A-201ENST00000296978 TET3O43151 1660 aa15.3■□□□□ 0.04
TMEM200A-201ENST00000296978 DTNBO60941 627 aa15.3■□□□□ 0.04
TMEM200A-201ENST00000296978 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
TMEM200A-201ENST00000296978 A0A0U1RQG5 324 aaPredicted RBP15.29■□□□□ 0.04
TMEM200A-201ENST00000296978 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
TMEM200A-201ENST00000296978 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
TMEM200A-201ENST00000296978 EIF2S2P20042 333 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms