RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 SBNO1A3KN83 1393 aa18.21■□□□□ 0.51
ABCF3-201ENST00000292808 NLRP6P59044 892 aa18.21■□□□□ 0.51
ABCF3-201ENST00000292808 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.5
ABCF3-201ENST00000292808 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.5
ABCF3-201ENST00000292808 HSPA2P54652 639 aa18.2■□□□□ 0.5
ABCF3-201ENST00000292808 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
ABCF3-201ENST00000292808 PROSER2Q86WR7 435 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-201ENST00000292808 FLT4P35916 1363 aa18.2■□□□□ 0.5
ABCF3-201ENST00000292808 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
ABCF3-201ENST00000292808 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
ABCF3-201ENST00000292808 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
ABCF3-201ENST00000292808 ABTB2Q8N961 1025 aa18.18■□□□□ 0.5
ABCF3-201ENST00000292808 NFAT5O94916 1531 aa18.18■□□□□ 0.5
ABCF3-201ENST00000292808 LMTK3Q96Q04 1460 aa18.17■□□□□ 0.5
ABCF3-201ENST00000292808 TRPM3Q9HCF6 1732 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-201ENST00000292808 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
ABCF3-201ENST00000292808 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-201ENST00000292808 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
ABCF3-201ENST00000292808 LTN1O94822 1766 aa18.17■□□□□ 0.5
ABCF3-201ENST00000292808 EXOSC9Q06265 439 aaKnown RBP18.16■□□□□ 0.5
ABCF3-201ENST00000292808 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
ABCF3-201ENST00000292808 C1orf167Q5SNV9 1468 aa18.16■□□□□ 0.5
ABCF3-201ENST00000292808 STRCQ7RTU9 1775 aa18.16■□□□□ 0.5
ABCF3-201ENST00000292808 ARHGEF10O15013 1369 aa18.16■□□□□ 0.5
ABCF3-201ENST00000292808 NEFMP07197 916 aa18.15■□□□□ 0.5
ABCF3-201ENST00000292808 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
ABCF3-201ENST00000292808 TMEM94Q12767 1356 aa18.14■□□□□ 0.49
ABCF3-201ENST00000292808 BCL2L13Q9BXK5 485 aa18.14■□□□□ 0.49
ABCF3-201ENST00000292808 KIF24Q5T7B8 1368 aa18.14■□□□□ 0.49
ABCF3-201ENST00000292808 KDRP35968 1356 aa18.13■□□□□ 0.49
ABCF3-201ENST00000292808 HOXC9P31274 260 aa18.13■□□□□ 0.49
ABCF3-201ENST00000292808 AMPHP49418 695 aa18.13■□□□□ 0.49
ABCF3-201ENST00000292808 PSME1Q06323 249 aa18.13■□□□□ 0.49
ABCF3-201ENST00000292808 C19orf44Q9H6X5 657 aa18.13■□□□□ 0.49
ABCF3-201ENST00000292808 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
ABCF3-201ENST00000292808 MST1RQ04912 1400 aa18.12■□□□□ 0.49
ABCF3-201ENST00000292808 MS4A1P11836 297 aa18.12■□□□□ 0.49
ABCF3-201ENST00000292808 TNNQ9UQP3 1299 aa18.12■□□□□ 0.49
ABCF3-201ENST00000292808 IGSF1Q8N6C5 1336 aa18.12■□□□□ 0.49
ABCF3-201ENST00000292808 CT47B1P0C2W7 299 aaPredicted RBP18.12■□□□□ 0.49
ABCF3-201ENST00000292808 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
ABCF3-201ENST00000292808 FAM83GA6ND36 823 aa18.11■□□□□ 0.49
ABCF3-201ENST00000292808 FOXO3O43524 673 aa18.11■□□□□ 0.49
ABCF3-201ENST00000292808 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
ABCF3-201ENST00000292808 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
ABCF3-201ENST00000292808 PHRF1Q9P1Y6 1649 aaKnown RBP18.11■□□□□ 0.49
ABCF3-201ENST00000292808 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
ABCF3-201ENST00000292808 XPCQ01831 940 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-201ENST00000292808 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
ABCF3-201ENST00000292808 EYA1Q99502 592 aa18.11■□□□□ 0.49
ABCF3-201ENST00000292808 SLIT3O75094 1523 aa18.1■□□□□ 0.49
ABCF3-201ENST00000292808 DCCP43146 1447 aa18.1■□□□□ 0.49
ABCF3-201ENST00000292808 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
ABCF3-201ENST00000292808 ERICH6Q7L0X2 663 aa18.09■□□□□ 0.49
ABCF3-201ENST00000292808 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-201ENST00000292808 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
ABCF3-201ENST00000292808 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
ABCF3-201ENST00000292808 RLBP1P12271 317 aa18.09■□□□□ 0.49
ABCF3-201ENST00000292808 DCTN1Q14203 1278 aa18.09■□□□□ 0.49
ABCF3-201ENST00000292808 IFT57Q9NWB7 429 aa18.08■□□□□ 0.49
ABCF3-201ENST00000292808 ALS2Q96Q42 1657 aa18.08■□□□□ 0.49
ABCF3-201ENST00000292808 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
ABCF3-201ENST00000292808 SSH1Q8WYL5 1049 aa18.08■□□□□ 0.48
ABCF3-201ENST00000292808 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
ABCF3-201ENST00000292808 LAS1LQ9Y4W2 734 aaKnown RBP18.07■□□□□ 0.48
ABCF3-201ENST00000292808 CALD1Q05682 793 aaKnown RBP18.06■□□□□ 0.48
ABCF3-201ENST00000292808 COG6Q9Y2V7 657 aa18.06■□□□□ 0.48
ABCF3-201ENST00000292808 GNAI1P63096 354 aa18.06■□□□□ 0.48
ABCF3-201ENST00000292808 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
ABCF3-201ENST00000292808 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-201ENST00000292808 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
ABCF3-201ENST00000292808 USP19O94966 1318 aa18.04■□□□□ 0.48
ABCF3-201ENST00000292808 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
ABCF3-201ENST00000292808 KRT28Q7Z3Y7 464 aa18.04■□□□□ 0.48
ABCF3-201ENST00000292808 CFAP44Q96MT7 982 aa18.04■□□□□ 0.48
ABCF3-201ENST00000292808 RGPD2P0DJD1 1756 aa18.04■□□□□ 0.48
ABCF3-201ENST00000292808 IP6K1Q92551 441 aa18.04■□□□□ 0.48
ABCF3-201ENST00000292808 ATF3P18847 181 aa18.03■□□□□ 0.48
ABCF3-201ENST00000292808 PDE4AP27815 886 aa18.03■□□□□ 0.48
ABCF3-201ENST00000292808 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
ABCF3-201ENST00000292808 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
ABCF3-201ENST00000292808 CRB1P82279 1406 aa18.03■□□□□ 0.48
ABCF3-201ENST00000292808 MCM10Q7L590 875 aa18.03■□□□□ 0.48
ABCF3-201ENST00000292808 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
ABCF3-201ENST00000292808 IPO9Q96P70 1041 aaKnown RBP18.03■□□□□ 0.48
ABCF3-201ENST00000292808 MED1Q15648 1581 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-201ENST00000292808 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-201ENST00000292808 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
ABCF3-201ENST00000292808 LRRC37A3O60309 1634 aa18.02■□□□□ 0.47
ABCF3-201ENST00000292808 VAMP4O75379 141 aa18.01■□□□□ 0.47
ABCF3-201ENST00000292808 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
ABCF3-201ENST00000292808 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
ABCF3-201ENST00000292808 DDX17Q92841 729 aaKnown RBP18.01■□□□□ 0.47
ABCF3-201ENST00000292808 GCP02774 474 aa18■□□□□ 0.47
ABCF3-201ENST00000292808 TRIM27P14373 513 aa18■□□□□ 0.47
ABCF3-201ENST00000292808 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
ABCF3-201ENST00000292808 C8orf58Q8NAV2 365 aa18■□□□□ 0.47
ABCF3-201ENST00000292808 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
ABCF3-201ENST00000292808 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
ABCF3-201ENST00000292808 MSH6P52701 1360 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms