RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
HIF3A-203ENST00000291300 ABTB2Q8N961 1025 aa21.74■■□□□ 1.07
HIF3A-203ENST00000291300 BCL2L13Q9BXK5 485 aa21.73■■□□□ 1.07
HIF3A-203ENST00000291300 MYH16Q9H6N6 1097 aa21.73■■□□□ 1.07
HIF3A-203ENST00000291300 DLG5Q8TDM6 1919 aa21.73■■□□□ 1.07
HIF3A-203ENST00000291300 RGPD1P0DJD0 1748 aa21.73■■□□□ 1.07
HIF3A-203ENST00000291300 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
HIF3A-203ENST00000291300 XPCQ01831 940 aaPredicted RBP21.71■■□□□ 1.07
HIF3A-203ENST00000291300 EXOSC9Q06265 439 aaKnown RBP21.71■■□□□ 1.07
HIF3A-203ENST00000291300 TNNQ9UQP3 1299 aa21.71■■□□□ 1.07
HIF3A-203ENST00000291300 USP54Q70EL1 1684 aa21.7■■□□□ 1.06
HIF3A-203ENST00000291300 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
HIF3A-203ENST00000291300 SBNO1A3KN83 1393 aa21.69■■□□□ 1.06
HIF3A-203ENST00000291300 FAM83GA6ND36 823 aa21.68■■□□□ 1.06
HIF3A-203ENST00000291300 IL16Q14005 1332 aa21.68■■□□□ 1.06
HIF3A-203ENST00000291300 FOXO3O43524 673 aa21.68■■□□□ 1.06
HIF3A-203ENST00000291300 NEFMP07197 916 aa21.68■■□□□ 1.06
HIF3A-203ENST00000291300 PSME1Q06323 249 aa21.68■■□□□ 1.06
HIF3A-203ENST00000291300 FLT4P35916 1363 aa21.68■■□□□ 1.06
HIF3A-203ENST00000291300 AMPHP49418 695 aa21.67■■□□□ 1.06
HIF3A-203ENST00000291300 FRAT1Q92837 279 aaPredicted RBP21.67■■□□□ 1.06
HIF3A-203ENST00000291300 DCTN1Q14203 1278 aa21.67■■□□□ 1.06
HIF3A-203ENST00000291300 PANK1Q8TE04 598 aa21.67■■□□□ 1.06
HIF3A-203ENST00000291300 LAS1LQ9Y4W2 734 aaKnown RBP21.66■■□□□ 1.06
HIF3A-203ENST00000291300 TMEM94Q12767 1356 aa21.65■■□□□ 1.06
HIF3A-203ENST00000291300 PLEKHG5O94827 1062 aa21.64■■□□□ 1.05
HIF3A-203ENST00000291300 HOXC9P31274 260 aa21.64■■□□□ 1.05
HIF3A-203ENST00000291300 EYA1Q99502 592 aa21.64■■□□□ 1.05
HIF3A-203ENST00000291300 RLBP1P12271 317 aa21.63■■□□□ 1.05
HIF3A-203ENST00000291300 SKAP1Q86WV1 359 aa21.63■■□□□ 1.05
HIF3A-203ENST00000291300 C19orf44Q9H6X5 657 aa21.63■■□□□ 1.05
HIF3A-203ENST00000291300 C1orf167Q5SNV9 1468 aa21.63■■□□□ 1.05
HIF3A-203ENST00000291300 LMTK3Q96Q04 1460 aa21.62■■□□□ 1.05
HIF3A-203ENST00000291300 LTN1O94822 1766 aa21.62■■□□□ 1.05
HIF3A-203ENST00000291300 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
HIF3A-203ENST00000291300 COG6Q9Y2V7 657 aa21.61■■□□□ 1.05
HIF3A-203ENST00000291300 NFAT5O94916 1531 aa21.61■■□□□ 1.05
HIF3A-203ENST00000291300 RBM19Q9Y4C8 960 aaKnown RBP21.61■■□□□ 1.05
HIF3A-203ENST00000291300 ARHGEF10O15013 1369 aa21.6■■□□□ 1.05
HIF3A-203ENST00000291300 STRCQ7RTU9 1775 aa21.6■■□□□ 1.05
HIF3A-203ENST00000291300 SSH1Q8WYL5 1049 aa21.6■■□□□ 1.05
HIF3A-203ENST00000291300 LTV1Q96GA3 475 aaPredicted RBP21.6■■□□□ 1.05
HIF3A-203ENST00000291300 PDE3AQ14432 1141 aa21.59■■□□□ 1.05
HIF3A-203ENST00000291300 DDX17Q92841 729 aaKnown RBP21.59■■□□□ 1.05
HIF3A-203ENST00000291300 ZNF853P0CG23 659 aa21.59■■□□□ 1.05
HIF3A-203ENST00000291300 TRPM3Q9HCF6 1732 aaPredicted RBP21.58■■□□□ 1.05
HIF3A-203ENST00000291300 CLUAP1Q96AJ1 413 aa21.58■■□□□ 1.05
HIF3A-203ENST00000291300 MBIPQ9NS73 344 aa21.58■■□□□ 1.05
HIF3A-203ENST00000291300 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.05
HIF3A-203ENST00000291300 TSPYL6Q8N831 410 aa21.58■■□□□ 1.04
HIF3A-203ENST00000291300 MST1RQ04912 1400 aa21.58■■□□□ 1.04
HIF3A-203ENST00000291300 KDRP35968 1356 aa21.57■■□□□ 1.04
HIF3A-203ENST00000291300 MCM10Q7L590 875 aa21.56■■□□□ 1.04
HIF3A-203ENST00000291300 SMC4Q9NTJ3 1288 aa21.56■■□□□ 1.04
HIF3A-203ENST00000291300 KDM2BQ8NHM5 1336 aa21.56■■□□□ 1.04
HIF3A-203ENST00000291300 ZBTB7CA1YPR0 619 aa21.56■■□□□ 1.04
HIF3A-203ENST00000291300 CT47B1P0C2W7 299 aaPredicted RBP21.56■■□□□ 1.04
HIF3A-203ENST00000291300 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
HIF3A-203ENST00000291300 LMOD2Q6P5Q4 547 aa21.56■■□□□ 1.04
HIF3A-203ENST00000291300 KRT28Q7Z3Y7 464 aa21.56■■□□□ 1.04
HIF3A-203ENST00000291300 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
HIF3A-203ENST00000291300 USHBP1Q8N6Y0 703 aa21.55■■□□□ 1.04
HIF3A-203ENST00000291300 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
HIF3A-203ENST00000291300 ELL2O00472 640 aaPredicted RBP21.53■■□□□ 1.04
HIF3A-203ENST00000291300 ATF3P18847 181 aa21.53■■□□□ 1.04
HIF3A-203ENST00000291300 GNAI1P63096 354 aa21.53■■□□□ 1.04
HIF3A-203ENST00000291300 LMOD3Q0VAK6 560 aa21.53■■□□□ 1.04
HIF3A-203ENST00000291300 KIF24Q5T7B8 1368 aa21.53■■□□□ 1.04
HIF3A-203ENST00000291300 CFAP44Q96MT7 982 aa21.53■■□□□ 1.04
HIF3A-203ENST00000291300 KIF1AQ12756 1690 aa21.53■■□□□ 1.04
HIF3A-203ENST00000291300 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
HIF3A-203ENST00000291300 VAMP4O75379 141 aa21.52■■□□□ 1.03
HIF3A-203ENST00000291300 IP6K1Q92551 441 aa21.52■■□□□ 1.03
HIF3A-203ENST00000291300 GCP02774 474 aa21.51■■□□□ 1.03
HIF3A-203ENST00000291300 CALD1Q05682 793 aaKnown RBP21.51■■□□□ 1.03
HIF3A-203ENST00000291300 NOB1Q9ULX3 412 aaKnown RBP21.51■■□□□ 1.03
HIF3A-203ENST00000291300 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
HIF3A-203ENST00000291300 TCERG1O14776 1098 aaKnown RBP21.5■■□□□ 1.03
HIF3A-203ENST00000291300 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
HIF3A-203ENST00000291300 SLIT3O75094 1523 aa21.5■■□□□ 1.03
HIF3A-203ENST00000291300 TRIM27P14373 513 aa21.5■■□□□ 1.03
HIF3A-203ENST00000291300 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
HIF3A-203ENST00000291300 KRT24Q2M2I5 525 aa21.49■■□□□ 1.03
HIF3A-203ENST00000291300 IGHDP01880 384 aa21.49■■□□□ 1.03
HIF3A-203ENST00000291300 ZNF335Q9H4Z2 1342 aaPredicted RBP21.48■■□□□ 1.03
HIF3A-203ENST00000291300 NBPF6Q5VWK0 638 aa21.48■■□□□ 1.03
HIF3A-203ENST00000291300 KCNH5Q8NCM2 988 aa21.48■■□□□ 1.03
HIF3A-203ENST00000291300 NBPF4Q96M43 638 aa21.48■■□□□ 1.03
HIF3A-203ENST00000291300 ALS2Q96Q42 1657 aa21.48■■□□□ 1.03
HIF3A-203ENST00000291300 CRB1P82279 1406 aa21.48■■□□□ 1.03
HIF3A-203ENST00000291300 LRRC59Q96AG4 307 aaKnown RBP21.47■■□□□ 1.03
HIF3A-203ENST00000291300 DCCP43146 1447 aa21.47■■□□□ 1.03
HIF3A-203ENST00000291300 USP19O94966 1318 aa21.47■■□□□ 1.03
HIF3A-203ENST00000291300 NCOA3Q9Y6Q9 1424 aa21.47■■□□□ 1.03
HIF3A-203ENST00000291300 ARHGEF25Q86VW2 580 aa21.47■■□□□ 1.03
HIF3A-203ENST00000291300 MIS18AQ9NYP9 233 aa21.47■■□□□ 1.03
HIF3A-203ENST00000291300 PHRF1Q9P1Y6 1649 aaKnown RBP21.46■■□□□ 1.03
HIF3A-203ENST00000291300 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
HIF3A-203ENST00000291300 MED1Q15648 1581 aaPredicted RBP21.46■■□□□ 1.03
HIF3A-203ENST00000291300 CHL1O00533 1208 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms