RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
ERCC3-201ENST00000285398 USP32Q8NFA0 1604 aa13.33□□□□□ -0.27
ERCC3-201ENST00000285398 TRMT2AQ8IZ69 625 aaKnown RBP13.33□□□□□ -0.27
ERCC3-201ENST00000285398 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
ERCC3-201ENST00000285398 C19orf44Q9H6X5 657 aa13.33□□□□□ -0.28
ERCC3-201ENST00000285398 UPF2Q9HAU5 1272 aaKnown RBP13.33□□□□□ -0.28
ERCC3-201ENST00000285398 PLEKHG3A1L390 1219 aa13.32□□□□□ -0.28
ERCC3-201ENST00000285398 MTHFSP49914 203 aa13.32□□□□□ -0.28
ERCC3-201ENST00000285398 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
ERCC3-201ENST00000285398 ATF3P18847 181 aa13.31□□□□□ -0.28
ERCC3-201ENST00000285398 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
ERCC3-201ENST00000285398 MRE11P49959 708 aa13.3□□□□□ -0.28
ERCC3-201ENST00000285398 RRS1Q15050 365 aaKnown RBP13.3□□□□□ -0.28
ERCC3-201ENST00000285398 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
ERCC3-201ENST00000285398 LMOD2Q6P5Q4 547 aa13.3□□□□□ -0.28
ERCC3-201ENST00000285398 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
ERCC3-201ENST00000285398 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
ERCC3-201ENST00000285398 SEC24BO95487 1268 aa13.28□□□□□ -0.28
ERCC3-201ENST00000285398 IGHDP01880 384 aa13.28□□□□□ -0.28
ERCC3-201ENST00000285398 USP6P35125 1406 aa13.28□□□□□ -0.28
ERCC3-201ENST00000285398 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
ERCC3-201ENST00000285398 MCM4P33991 863 aa13.28□□□□□ -0.28
ERCC3-201ENST00000285398 PSME1Q06323 249 aa13.28□□□□□ -0.28
ERCC3-201ENST00000285398 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
ERCC3-201ENST00000285398 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
ERCC3-201ENST00000285398 PDE4CQ08493 712 aa13.27□□□□□ -0.28
ERCC3-201ENST00000285398 PANK2Q9BZ23 570 aa13.27□□□□□ -0.28
ERCC3-201ENST00000285398 DMRT2Q9Y5R5 561 aa13.27□□□□□ -0.28
ERCC3-201ENST00000285398 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
ERCC3-201ENST00000285398 COG3Q96JB2 828 aa13.27□□□□□ -0.29
ERCC3-201ENST00000285398 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
ERCC3-201ENST00000285398 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 NLRP6P59044 892 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 ESPNB1AK53 854 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 BCAR3O75815 825 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 PDE3AQ14432 1141 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 TBC1D32Q96NH3 1257 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 TBC1D2Q9BYX2 928 aa13.26□□□□□ -0.29
ERCC3-201ENST00000285398 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
ERCC3-201ENST00000285398 POLR3AO14802 1390 aaPredicted RBP13.25□□□□□ -0.29
ERCC3-201ENST00000285398 MSH6P52701 1360 aa13.25□□□□□ -0.29
ERCC3-201ENST00000285398 GZF1Q9H116 711 aaPredicted RBP13.25□□□□□ -0.29
ERCC3-201ENST00000285398 ANKARQ7Z5J8 1434 aa13.25□□□□□ -0.29
ERCC3-201ENST00000285398 E9PSI1 815 aa13.25□□□□□ -0.29
ERCC3-201ENST00000285398 C1orf167Q5SNV9 1468 aa13.25□□□□□ -0.29
ERCC3-201ENST00000285398 TRAK2O60296 914 aa13.24□□□□□ -0.29
ERCC3-201ENST00000285398 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
ERCC3-201ENST00000285398 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
ERCC3-201ENST00000285398 POLKQ9UBT6 870 aa13.24□□□□□ -0.29
ERCC3-201ENST00000285398 TPM2P07951 284 aa13.24□□□□□ -0.29
ERCC3-201ENST00000285398 NSD2O96028 1365 aa13.23□□□□□ -0.29
ERCC3-201ENST00000285398 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
ERCC3-201ENST00000285398 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
ERCC3-201ENST00000285398 MST1RQ04912 1400 aa13.23□□□□□ -0.29
ERCC3-201ENST00000285398 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
ERCC3-201ENST00000285398 TRIM44Q96DX7 344 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-201ENST00000285398 GRPEL1Q9HAV7 217 aa13.23□□□□□ -0.29
ERCC3-201ENST00000285398 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
ERCC3-201ENST00000285398 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
ERCC3-201ENST00000285398 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
ERCC3-201ENST00000285398 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
ERCC3-201ENST00000285398 PDCL3Q9H2J4 239 aa13.22□□□□□ -0.29
ERCC3-201ENST00000285398 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
ERCC3-201ENST00000285398 APAF1O14727 1248 aa13.21□□□□□ -0.29
ERCC3-201ENST00000285398 AAMPQ13685 434 aa13.21□□□□□ -0.29
ERCC3-201ENST00000285398 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
ERCC3-201ENST00000285398 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.29
ERCC3-201ENST00000285398 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
ERCC3-201ENST00000285398 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
ERCC3-201ENST00000285398 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
ERCC3-201ENST00000285398 NCOA3Q9Y6Q9 1424 aa13.2□□□□□ -0.3
ERCC3-201ENST00000285398 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-201ENST00000285398 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.3
ERCC3-201ENST00000285398 CABLES1Q8TDN4 633 aa13.19□□□□□ -0.3
ERCC3-201ENST00000285398 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
ERCC3-201ENST00000285398 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
ERCC3-201ENST00000285398 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
ERCC3-201ENST00000285398 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 NRKQ7Z2Y5 1582 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
ERCC3-201ENST00000285398 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
ERCC3-201ENST00000285398 DCCP43146 1447 aa13.17□□□□□ -0.3
ERCC3-201ENST00000285398 HMOX1P09601 288 aa13.17□□□□□ -0.3
ERCC3-201ENST00000285398 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
ERCC3-201ENST00000285398 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
ERCC3-201ENST00000285398 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-201ENST00000285398 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
ERCC3-201ENST00000285398 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
ERCC3-201ENST00000285398 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.3
ERCC3-201ENST00000285398 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
ERCC3-201ENST00000285398 PIP4K2BP78356 416 aa13.15□□□□□ -0.31
ERCC3-201ENST00000285398 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms