RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 LMTK3Q96Q04 1460 aa11.47□□□□□ -0.57
CCDC144B-201ENST00000285176 MTHFSDQ2M296 383 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 NOB1Q9ULX3 412 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 SBNO2Q9Y2G9 1366 aa11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 TULP4Q9NRJ4 1543 aa11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 HOXC9P31274 260 aa11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 CALD1Q05682 793 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 TSPYL6Q8N831 410 aa11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 ZFYVE9O95405 1425 aa11.46□□□□□ -0.57
CCDC144B-201ENST00000285176 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.58
CCDC144B-201ENST00000285176 NPHP3Q7Z494 1330 aa11.46□□□□□ -0.58
CCDC144B-201ENST00000285176 FANCIQ9NVI1 1328 aa11.46□□□□□ -0.58
CCDC144B-201ENST00000285176 GNAI1P63096 354 aa11.46□□□□□ -0.58
CCDC144B-201ENST00000285176 SLC39A6Q13433 755 aa11.46□□□□□ -0.58
CCDC144B-201ENST00000285176 KCNH5Q8NCM2 988 aa11.46□□□□□ -0.58
CCDC144B-201ENST00000285176 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
CCDC144B-201ENST00000285176 ZKSCAN2Q63HK3 967 aa11.45□□□□□ -0.58
CCDC144B-201ENST00000285176 SSH1Q8WYL5 1049 aa11.45□□□□□ -0.58
CCDC144B-201ENST00000285176 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
CCDC144B-201ENST00000285176 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
CCDC144B-201ENST00000285176 FER1L4A9Z1Z3 1794 aa11.45□□□□□ -0.58
CCDC144B-201ENST00000285176 MYL6BP14649 208 aa11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 IL13P35225 146 aa11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 ADGRB1O14514 1584 aa11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 F6X3S4 739 aa11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 TTC5Q8N0Z6 440 aa11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
CCDC144B-201ENST00000285176 NINLQ9Y2I6 1382 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 EDC4Q6P2E9 1401 aaKnown RBP11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 IPO8O15397 1037 aaKnown RBP11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 GAS2L2Q8NHY3 880 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 CHMP3Q9Y3E7 222 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 PLEKHO1Q53GL0 409 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 SPATA31D1Q6ZQQ2 1576 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 NGLY1Q96IV0 654 aa11.43□□□□□ -0.58
CCDC144B-201ENST00000285176 POLR3AO14802 1390 aaPredicted RBP11.42□□□□□ -0.58
CCDC144B-201ENST00000285176 GNAT3A8MTJ3 354 aa11.42□□□□□ -0.58
CCDC144B-201ENST00000285176 TTC21AQ8NDW8 1320 aa11.42□□□□□ -0.58
CCDC144B-201ENST00000285176 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
CCDC144B-201ENST00000285176 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
CCDC144B-201ENST00000285176 NSD2O96028 1365 aa11.42□□□□□ -0.58
CCDC144B-201ENST00000285176 NPHP1O15259 732 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 BTG4Q9NY30 223 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 HDGFL1Q5TGJ6 251 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 SMG6Q86US8 1419 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 PPLO60437 1756 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 BTBD11A6QL63 1104 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
CCDC144B-201ENST00000285176 BRINP3Q76B58 766 aa11.4□□□□□ -0.58
CCDC144B-201ENST00000285176 USP6P35125 1406 aa11.4□□□□□ -0.58
CCDC144B-201ENST00000285176 FAM182BQ5T319 152 aa11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 FLT4P35916 1363 aa11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 CEP170BQ9Y4F5 1589 aaPredicted RBP11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 ZC3H13Q5T200 1668 aaKnown RBP11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 JARID2Q92833 1246 aaPredicted RBP11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 CABP4P57796 275 aa11.39□□□□□ -0.59
CCDC144B-201ENST00000285176 NRXN1Q9ULB1 1477 aa11.38□□□□□ -0.59
CCDC144B-201ENST00000285176 RLBP1P12271 317 aa11.38□□□□□ -0.59
CCDC144B-201ENST00000285176 TMEM57Q8N5G2 664 aa11.38□□□□□ -0.59
CCDC144B-201ENST00000285176 SIRT1Q96EB6 747 aa11.38□□□□□ -0.59
CCDC144B-201ENST00000285176 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 FAM135BQ49AJ0 1406 aa11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 TOM1O60784 492 aa11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 IP6K1Q92551 441 aa11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 RBM19Q9Y4C8 960 aaKnown RBP11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 LNPKQ9C0E8 428 aa11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 C3P01024 1663 aa11.37□□□□□ -0.59
CCDC144B-201ENST00000285176 KCNQ3O43525 872 aa11.36□□□□□ -0.59
CCDC144B-201ENST00000285176 CCDC85AQ96PX6 553 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-201ENST00000285176 ANKRD45Q5TZF3 282 aa11.36□□□□□ -0.59
CCDC144B-201ENST00000285176 KIAA0232Q92628 1395 aa11.36□□□□□ -0.59
CCDC144B-201ENST00000285176 CPS1P31327 1500 aa11.36□□□□□ -0.59
CCDC144B-201ENST00000285176 TRIM27P14373 513 aa11.36□□□□□ -0.59
CCDC144B-201ENST00000285176 IQGAP1P46940 1657 aa11.35□□□□□ -0.59
CCDC144B-201ENST00000285176 LARP1Q6PKG0 1096 aaKnown RBP11.35□□□□□ -0.59
CCDC144B-201ENST00000285176 ATF7IPQ6VMQ6 1270 aa11.35□□□□□ -0.59
CCDC144B-201ENST00000285176 NPC1L1Q9UHC9 1359 aa11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 ATP7BP35670 1465 aa11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 SPG7Q9UQ90 795 aa11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 TAF7Q15545 349 aaPredicted RBP11.34□□□□□ -0.59
CCDC144B-201ENST00000285176 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms