RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 MEIS3Q99687 375 aa17.83■□□□□ 0.45
CNOT9-201ENST00000273064 ANO8Q9HCE9 1232 aaPredicted RBP17.83■□□□□ 0.45
CNOT9-201ENST00000273064 SRGAP3O43295 1099 aa17.83■□□□□ 0.44
CNOT9-201ENST00000273064 NEUROD6Q96NK8 337 aa17.83■□□□□ 0.44
CNOT9-201ENST00000273064 ABCC2Q92887 1545 aa17.83■□□□□ 0.44
CNOT9-201ENST00000273064 ANKRD36BQ8N2N9 1353 aa17.83■□□□□ 0.44
CNOT9-201ENST00000273064 NEXNQ0ZGT2 675 aa17.83■□□□□ 0.44
CNOT9-201ENST00000273064 MCM4P33991 863 aa17.82■□□□□ 0.44
CNOT9-201ENST00000273064 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
CNOT9-201ENST00000273064 KDM4AO75164 1064 aa17.82■□□□□ 0.44
CNOT9-201ENST00000273064 G3BP1Q13283 466 aaKnown RBP eCLIP17.81■□□□□ 0.44
CNOT9-201ENST00000273064 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
CNOT9-201ENST00000273064 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
CNOT9-201ENST00000273064 EVA1CP58658 441 aa17.81■□□□□ 0.44
CNOT9-201ENST00000273064 GNAI3P08754 354 aa17.8■□□□□ 0.44
CNOT9-201ENST00000273064 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
CNOT9-201ENST00000273064 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
CNOT9-201ENST00000273064 DTNBO60941 627 aa17.8■□□□□ 0.44
CNOT9-201ENST00000273064 BCL11BQ9C0K0 894 aaPredicted RBP17.8■□□□□ 0.44
CNOT9-201ENST00000273064 POLR3AO14802 1390 aaPredicted RBP17.8■□□□□ 0.44
CNOT9-201ENST00000273064 TULP1O00294 542 aaPredicted RBP17.8■□□□□ 0.44
CNOT9-201ENST00000273064 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
CNOT9-201ENST00000273064 TOMM22Q9NS69 142 aa17.79■□□□□ 0.44
CNOT9-201ENST00000273064 TBC1D9Q6ZT07 1266 aa17.79■□□□□ 0.44
CNOT9-201ENST00000273064 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
CNOT9-201ENST00000273064 EIF4A2Q14240 407 aaKnown RBP17.78■□□□□ 0.44
CNOT9-201ENST00000273064 SAMD9LQ8IVG5 1584 aa17.78■□□□□ 0.44
CNOT9-201ENST00000273064 VAMP4O75379 141 aa17.78■□□□□ 0.44
CNOT9-201ENST00000273064 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
CNOT9-201ENST00000273064 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
CNOT9-201ENST00000273064 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
CNOT9-201ENST00000273064 ATF3P18847 181 aa17.77■□□□□ 0.44
CNOT9-201ENST00000273064 CLASRPQ8N2M8 674 aaKnown RBP17.77■□□□□ 0.44
CNOT9-201ENST00000273064 KAT6BQ8WYB5 2073 aa17.77■□□□□ 0.44
CNOT9-201ENST00000273064 ZNF518AQ6AHZ1 1483 aa17.77■□□□□ 0.44
CNOT9-201ENST00000273064 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
CNOT9-201ENST00000273064 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
CNOT9-201ENST00000273064 CWC27Q6UX04 472 aaKnown RBP17.77■□□□□ 0.44
CNOT9-201ENST00000273064 LRRFIP2Q9Y608 721 aaKnown RBP17.77■□□□□ 0.44
CNOT9-201ENST00000273064 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.43
CNOT9-201ENST00000273064 K7ELQ4 463 aaPredicted RBP17.76■□□□□ 0.43
CNOT9-201ENST00000273064 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
CNOT9-201ENST00000273064 PIP4K2AP48426 406 aaPredicted RBP17.76■□□□□ 0.43
CNOT9-201ENST00000273064 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
CNOT9-201ENST00000273064 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
CNOT9-201ENST00000273064 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
CNOT9-201ENST00000273064 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
CNOT9-201ENST00000273064 KDM5CP41229 1560 aa17.75■□□□□ 0.43
CNOT9-201ENST00000273064 BTBD11A6QL63 1104 aa17.75■□□□□ 0.43
CNOT9-201ENST00000273064 TTC37Q6PGP7 1564 aa17.75■□□□□ 0.43
CNOT9-201ENST00000273064 SSFA2P28290 1259 aa17.75■□□□□ 0.43
CNOT9-201ENST00000273064 DNAJC2Q99543 621 aaKnown RBP17.75■□□□□ 0.43
CNOT9-201ENST00000273064 ABCA8O94911 1581 aa17.75■□□□□ 0.43
CNOT9-201ENST00000273064 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
CNOT9-201ENST00000273064 PTPRTO14522 1441 aa17.74■□□□□ 0.43
CNOT9-201ENST00000273064 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
CNOT9-201ENST00000273064 LRRIQ1Q96JM4 1722 aa17.74■□□□□ 0.43
CNOT9-201ENST00000273064 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
CNOT9-201ENST00000273064 ZKSCAN1P17029 563 aaPredicted RBP17.73■□□□□ 0.43
CNOT9-201ENST00000273064 ATP10AO60312 1499 aa17.73■□□□□ 0.43
CNOT9-201ENST00000273064 NPATQ14207 1427 aa17.73■□□□□ 0.43
CNOT9-201ENST00000273064 ERC2O15083 957 aa17.73■□□□□ 0.43
CNOT9-201ENST00000273064 PTCD1O75127 700 aaKnown RBP17.73■□□□□ 0.43
CNOT9-201ENST00000273064 CCT4P50991 539 aaKnown RBP17.73■□□□□ 0.43
CNOT9-201ENST00000273064 DDX58O95786 925 aaKnown RBP17.73■□□□□ 0.43
CNOT9-201ENST00000273064 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
CNOT9-201ENST00000273064 FLIIQ13045 1269 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 STK3Q13188 491 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 G2E3Q7L622 706 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 FSD1Q9BTV5 496 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 FIBPO43427 364 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 RPAP2Q8IXW5 612 aaPredicted RBP17.72■□□□□ 0.43
CNOT9-201ENST00000273064 CHMP4AQ9BY43 222 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 SMC3Q9UQE7 1217 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
CNOT9-201ENST00000273064 ANKLE2Q86XL3 938 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
CNOT9-201ENST00000273064 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
CNOT9-201ENST00000273064 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
CNOT9-201ENST00000273064 NUCB2P80303 420 aa17.71■□□□□ 0.43
CNOT9-201ENST00000273064 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.43
CNOT9-201ENST00000273064 GDPD2Q9HCC8 539 aa17.71■□□□□ 0.43
CNOT9-201ENST00000273064 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
CNOT9-201ENST00000273064 RABEP1Q15276 862 aa17.71■□□□□ 0.43
CNOT9-201ENST00000273064 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
CNOT9-201ENST00000273064 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.43
CNOT9-201ENST00000273064 ABCC11Q96J66 1382 aa17.7■□□□□ 0.42
CNOT9-201ENST00000273064 SYAP1Q96A49 352 aaPredicted RBP17.7■□□□□ 0.42
CNOT9-201ENST00000273064 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
CNOT9-201ENST00000273064 H3BQV1 296 aa17.7■□□□□ 0.42
CNOT9-201ENST00000273064 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
CNOT9-201ENST00000273064 IFFO2Q5TF58 517 aa17.7■□□□□ 0.42
CNOT9-201ENST00000273064 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
CNOT9-201ENST00000273064 NUCB1Q02818 461 aa17.69■□□□□ 0.42
CNOT9-201ENST00000273064 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
CNOT9-201ENST00000273064 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
CNOT9-201ENST00000273064 APPP05067 770 aa17.69■□□□□ 0.42
CNOT9-201ENST00000273064 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms