RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 ANXA1P04083 346 aa13.78□□□□□ -0.2
SFXN5-201ENST00000272433 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
SFXN5-201ENST00000272433 CABP4P57796 275 aa13.78□□□□□ -0.2
SFXN5-201ENST00000272433 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
SFXN5-201ENST00000272433 TRIM27P14373 513 aa13.78□□□□□ -0.2
SFXN5-201ENST00000272433 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
SFXN5-201ENST00000272433 C19orf44Q9H6X5 657 aa13.77□□□□□ -0.2
SFXN5-201ENST00000272433 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.2
SFXN5-201ENST00000272433 ABCC3O15438 1527 aa13.77□□□□□ -0.2
SFXN5-201ENST00000272433 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
SFXN5-201ENST00000272433 ANKRD24Q8TF21 1146 aa13.77□□□□□ -0.21
SFXN5-201ENST00000272433 PLXNC1O60486 1568 aa13.76□□□□□ -0.21
SFXN5-201ENST00000272433 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
SFXN5-201ENST00000272433 EYA1Q99502 592 aa13.76□□□□□ -0.21
SFXN5-201ENST00000272433 ABCC11Q96J66 1382 aa13.76□□□□□ -0.21
SFXN5-201ENST00000272433 KDM5CP41229 1560 aa13.76□□□□□ -0.21
SFXN5-201ENST00000272433 CFAP74Q9C0B2 1584 aa13.76□□□□□ -0.21
SFXN5-201ENST00000272433 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
SFXN5-201ENST00000272433 IFT57Q9NWB7 429 aa13.75□□□□□ -0.21
SFXN5-201ENST00000272433 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
SFXN5-201ENST00000272433 SPG7Q9UQ90 795 aa13.75□□□□□ -0.21
SFXN5-201ENST00000272433 ABCA9Q8IUA7 1624 aa13.75□□□□□ -0.21
SFXN5-201ENST00000272433 C8orf58Q8NAV2 365 aa13.75□□□□□ -0.21
SFXN5-201ENST00000272433 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
SFXN5-201ENST00000272433 GCP02774 474 aa13.75□□□□□ -0.21
SFXN5-201ENST00000272433 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
SFXN5-201ENST00000272433 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
SFXN5-201ENST00000272433 MCCP23508 829 aa13.74□□□□□ -0.21
SFXN5-201ENST00000272433 MTHFSDQ2M296 383 aaKnown RBP13.74□□□□□ -0.21
SFXN5-201ENST00000272433 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
SFXN5-201ENST00000272433 CT47B1P0C2W7 299 aaPredicted RBP13.73□□□□□ -0.21
SFXN5-201ENST00000272433 TTC21AQ8NDW8 1320 aa13.73□□□□□ -0.21
SFXN5-201ENST00000272433 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
SFXN5-201ENST00000272433 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
SFXN5-201ENST00000272433 ROBO2Q9HCK4 1378 aa13.73□□□□□ -0.21
SFXN5-201ENST00000272433 EFCAB6Q5THR3 1501 aa13.72□□□□□ -0.21
SFXN5-201ENST00000272433 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
SFXN5-201ENST00000272433 RLBP1P12271 317 aa13.72□□□□□ -0.21
SFXN5-201ENST00000272433 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 GOLGA6L22H0YM25 854 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 CROCC2H7BZ55 1655 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 MSH5O43196 834 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 GPATCH3Q96I76 525 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 IGHDP01880 384 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 GNAI3P08754 354 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.21
SFXN5-201ENST00000272433 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
SFXN5-201ENST00000272433 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
SFXN5-201ENST00000272433 SIL1Q9H173 461 aa13.71□□□□□ -0.21
SFXN5-201ENST00000272433 PRR36Q9H6K5 1346 aa13.71□□□□□ -0.22
SFXN5-201ENST00000272433 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.22
SFXN5-201ENST00000272433 IFIT2P09913 472 aaKnown RBP13.71□□□□□ -0.22
SFXN5-201ENST00000272433 SLC39A6Q13433 755 aa13.71□□□□□ -0.22
SFXN5-201ENST00000272433 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.22
SFXN5-201ENST00000272433 EXOC6BQ9Y2D4 811 aa13.71□□□□□ -0.22
SFXN5-201ENST00000272433 MSH6P52701 1360 aa13.7□□□□□ -0.22
SFXN5-201ENST00000272433 GNAI2P04899 355 aa13.7□□□□□ -0.22
SFXN5-201ENST00000272433 IL13P35225 146 aa13.7□□□□□ -0.22
SFXN5-201ENST00000272433 GZF1Q9H116 711 aaPredicted RBP13.7□□□□□ -0.22
SFXN5-201ENST00000272433 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
SFXN5-201ENST00000272433 IL1RAPL2Q9NP60 686 aa13.7□□□□□ -0.22
SFXN5-201ENST00000272433 TET3O43151 1660 aa13.7□□□□□ -0.22
SFXN5-201ENST00000272433 PIP4K2AP48426 406 aaPredicted RBP13.69□□□□□ -0.22
SFXN5-201ENST00000272433 ANP32BQ92688 251 aaKnown RBP13.69□□□□□ -0.22
SFXN5-201ENST00000272433 NEUROD6Q96NK8 337 aa13.69□□□□□ -0.22
SFXN5-201ENST00000272433 HOXC9P31274 260 aa13.69□□□□□ -0.22
SFXN5-201ENST00000272433 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 PCDHB15Q9Y5E8 787 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 SBNO2Q9Y2G9 1366 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 KIF1BO60333 1816 aa13.68□□□□□ -0.22
SFXN5-201ENST00000272433 SMARCA5O60264 1052 aaPredicted RBP13.67□□□□□ -0.22
SFXN5-201ENST00000272433 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
SFXN5-201ENST00000272433 UNC13BO14795 1591 aa13.67□□□□□ -0.22
SFXN5-201ENST00000272433 PLEKHG3A1L390 1219 aa13.67□□□□□ -0.22
SFXN5-201ENST00000272433 BACH2Q9BYV9 841 aa13.67□□□□□ -0.22
SFXN5-201ENST00000272433 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
SFXN5-201ENST00000272433 FOXD4L6Q3SYB3 417 aaPredicted RBP13.67□□□□□ -0.22
SFXN5-201ENST00000272433 FOXD4L3Q6VB84 417 aaPredicted RBP13.67□□□□□ -0.22
SFXN5-201ENST00000272433 FLT4P35916 1363 aa13.67□□□□□ -0.22
SFXN5-201ENST00000272433 CCT4P50991 539 aaKnown RBP13.66□□□□□ -0.22
SFXN5-201ENST00000272433 AMOTQ4VCS5 1084 aa13.66□□□□□ -0.22
SFXN5-201ENST00000272433 MYOM2P54296 1465 aa13.66□□□□□ -0.22
SFXN5-201ENST00000272433 MAP4K4O95819 1239 aaPredicted RBP13.66□□□□□ -0.22
SFXN5-201ENST00000272433 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
SFXN5-201ENST00000272433 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
SFXN5-201ENST00000272433 EDC4Q6P2E9 1401 aaKnown RBP13.66□□□□□ -0.22
SFXN5-201ENST00000272433 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
SFXN5-201ENST00000272433 E9PCH4 1651 aa13.66□□□□□ -0.22
SFXN5-201ENST00000272433 FLIIQ13045 1269 aa13.66□□□□□ -0.22
SFXN5-201ENST00000272433 AAMPQ13685 434 aa13.66□□□□□ -0.22
SFXN5-201ENST00000272433 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
SFXN5-201ENST00000272433 C22orf23Q9BZE7 217 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms