RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 POGZQ7Z3K3 1410 aa21.14■□□□□ 0.97
LRRC56-201ENST00000270115 KIAA2012Q0VF49 1180 aa21.14■□□□□ 0.97
LRRC56-201ENST00000270115 STAC3Q96MF2 364 aa21.14■□□□□ 0.97
LRRC56-201ENST00000270115 ZNF830Q96NB3 372 aaPredicted RBP21.14■□□□□ 0.97
LRRC56-201ENST00000270115 ZDHHC9Q9Y397 364 aa21.14■□□□□ 0.97
LRRC56-201ENST00000270115 PTPRTO14522 1441 aa21.13■□□□□ 0.97
LRRC56-201ENST00000270115 CFAP74Q9C0B2 1584 aa21.13■□□□□ 0.97
LRRC56-201ENST00000270115 GCC1Q96CN9 775 aa21.13■□□□□ 0.97
LRRC56-201ENST00000270115 NOS1P29475 1434 aa21.12■□□□□ 0.97
LRRC56-201ENST00000270115 CHGAP10645 457 aaKnown RBP21.12■□□□□ 0.97
LRRC56-201ENST00000270115 GSPT1P15170 499 aaKnown RBP21.12■□□□□ 0.97
LRRC56-201ENST00000270115 MYRIPQ8NFW9 859 aa21.12■□□□□ 0.97
LRRC56-201ENST00000270115 ARHGAP31Q2M1Z3 1444 aa21.11■□□□□ 0.97
LRRC56-201ENST00000270115 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
LRRC56-201ENST00000270115 UGGT1Q9NYU2 1555 aa21.11■□□□□ 0.97
LRRC56-201ENST00000270115 UTP14CQ5TAP6 766 aaKnown RBP21.11■□□□□ 0.97
LRRC56-201ENST00000270115 ZNF710Q8N1W2 664 aa21.11■□□□□ 0.97
LRRC56-201ENST00000270115 ZBTB7BO15156 539 aaPredicted RBP21.1■□□□□ 0.97
LRRC56-201ENST00000270115 MROH1Q8NDA8 1641 aa21.1■□□□□ 0.97
LRRC56-201ENST00000270115 SIRT2Q8IXJ6 389 aa21.1■□□□□ 0.97
LRRC56-201ENST00000270115 C17orf53Q8N3J3 647 aaPredicted RBP21.09■□□□□ 0.97
LRRC56-201ENST00000270115 CLTCL1P53675 1640 aa21.09■□□□□ 0.97
LRRC56-201ENST00000270115 PLEKHF1Q96S99 279 aa21.08■□□□□ 0.97
LRRC56-201ENST00000270115 FGD1P98174 961 aa21.08■□□□□ 0.96
LRRC56-201ENST00000270115 PPP4R3BQ5MIZ7 849 aa21.08■□□□□ 0.96
LRRC56-201ENST00000270115 USP26Q9BXU7 913 aa21.08■□□□□ 0.96
LRRC56-201ENST00000270115 CWC22Q9HCG8 908 aaKnown RBP21.08■□□□□ 0.96
LRRC56-201ENST00000270115 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
LRRC56-201ENST00000270115 ABCC11Q96J66 1382 aa21.07■□□□□ 0.96
LRRC56-201ENST00000270115 ATP2B3Q16720 1220 aa21.07■□□□□ 0.96
LRRC56-201ENST00000270115 FOXD4L6Q3SYB3 417 aaPredicted RBP21.07■□□□□ 0.96
LRRC56-201ENST00000270115 FOXD4L3Q6VB84 417 aaPredicted RBP21.07■□□□□ 0.96
LRRC56-201ENST00000270115 TRPM2O94759 1503 aa21.07■□□□□ 0.96
LRRC56-201ENST00000270115 C16orf71Q8IYS4 520 aaPredicted RBP21.06■□□□□ 0.96
LRRC56-201ENST00000270115 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
LRRC56-201ENST00000270115 MLH3Q9UHC1 1453 aa21.05■□□□□ 0.96
LRRC56-201ENST00000270115 SPDYE4A6NLX3 237 aa21.05■□□□□ 0.96
LRRC56-201ENST00000270115 TSPY26PQ9H489 355 aa21.05■□□□□ 0.96
LRRC56-201ENST00000270115 TET3O43151 1660 aa21.05■□□□□ 0.96
LRRC56-201ENST00000270115 FRMPD1Q5SYB0 1578 aa21.04■□□□□ 0.96
LRRC56-201ENST00000270115 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
LRRC56-201ENST00000270115 ST18O60284 1047 aa21.04■□□□□ 0.96
LRRC56-201ENST00000270115 TPRNQ4KMQ1 711 aa21.04■□□□□ 0.96
LRRC56-201ENST00000270115 PLEKHM2Q8IWE5 1019 aa21.04■□□□□ 0.96
LRRC56-201ENST00000270115 NCBP3Q53F19 620 aaKnown RBP21.04■□□□□ 0.96
LRRC56-201ENST00000270115 TMEM132EQ6IEE7 984 aa21.03■□□□□ 0.96
LRRC56-201ENST00000270115 TTC12Q9H892 705 aaPredicted RBP21.03■□□□□ 0.96
LRRC56-201ENST00000270115 IGSF3O75054 1194 aa21.02■□□□□ 0.96
LRRC56-201ENST00000270115 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.96
LRRC56-201ENST00000270115 NEO1Q92859 1461 aa21.02■□□□□ 0.96
LRRC56-201ENST00000270115 APBB1O00213 710 aa21.02■□□□□ 0.95
LRRC56-201ENST00000270115 ALDH1L2Q3SY69 923 aa21.02■□□□□ 0.95
LRRC56-201ENST00000270115 ADGRB2O60241 1585 aa21.01■□□□□ 0.95
LRRC56-201ENST00000270115 NUTM2DQ5VT03 806 aaPredicted RBP21.01■□□□□ 0.95
LRRC56-201ENST00000270115 ABCA6Q8N139 1617 aa21.01■□□□□ 0.95
LRRC56-201ENST00000270115 HECW2Q9P2P5 1572 aa21.01■□□□□ 0.95
LRRC56-201ENST00000270115 OTUD7AQ8TE49 926 aaPredicted RBP21.01■□□□□ 0.95
LRRC56-201ENST00000270115 ATAD2Q6PL18 1390 aa21■□□□□ 0.95
LRRC56-201ENST00000270115 MBD3O95983 291 aa21■□□□□ 0.95
LRRC56-201ENST00000270115 PRIMPOLQ96LW4 560 aa21■□□□□ 0.95
LRRC56-201ENST00000270115 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
LRRC56-201ENST00000270115 CFAP65Q6ZU64 1925 aaKnown RBP21■□□□□ 0.95
LRRC56-201ENST00000270115 TTC22Q5TAA0 569 aa21■□□□□ 0.95
LRRC56-201ENST00000270115 GDPD2Q9HCC8 539 aa21■□□□□ 0.95
LRRC56-201ENST00000270115 GGNBP2Q9H3C7 697 aa20.99■□□□□ 0.95
LRRC56-201ENST00000270115 USP25Q9UHP3 1055 aa20.99■□□□□ 0.95
LRRC56-201ENST00000270115 KIF3AQ9Y496 699 aa20.99■□□□□ 0.95
LRRC56-201ENST00000270115 INTS3Q68E01 1043 aaKnown RBP20.99■□□□□ 0.95
LRRC56-201ENST00000270115 NOL8Q76FK4 1167 aaKnown RBP20.99■□□□□ 0.95
LRRC56-201ENST00000270115 PIBF1Q8WXW3 757 aa20.99■□□□□ 0.95
LRRC56-201ENST00000270115 IL16Q14005 1332 aa20.99■□□□□ 0.95
LRRC56-201ENST00000270115 HMGN5P82970 282 aaKnown RBP20.98■□□□□ 0.95
LRRC56-201ENST00000270115 GTPBP4Q9BZE4 634 aaKnown RBP20.98■□□□□ 0.95
LRRC56-201ENST00000270115 PPRC1Q5VV67 1664 aaKnown RBP20.98■□□□□ 0.95
LRRC56-201ENST00000270115 TSPOAP1O95153 1857 aa20.98■□□□□ 0.95
LRRC56-201ENST00000270115 KIAA1210Q9ULL0 1709 aa20.97■□□□□ 0.95
LRRC56-201ENST00000270115 TSPYL6Q8N831 410 aa20.97■□□□□ 0.95
LRRC56-201ENST00000270115 THUMPD2Q9BTF0 503 aaKnown RBP20.97■□□□□ 0.95
LRRC56-201ENST00000270115 BCL2L12Q9HB09 334 aa20.97■□□□□ 0.95
LRRC56-201ENST00000270115 MAP3K4Q9Y6R4 1608 aa20.97■□□□□ 0.95
LRRC56-201ENST00000270115 SBNO2Q9Y2G9 1366 aa20.96■□□□□ 0.95
LRRC56-201ENST00000270115 EFCAB6Q5THR3 1501 aa20.96■□□□□ 0.95
LRRC56-201ENST00000270115 SDSP20132 328 aa20.96■□□□□ 0.95
LRRC56-201ENST00000270115 MRPL50Q8N5N7 158 aaKnown RBP20.96■□□□□ 0.95
LRRC56-201ENST00000270115 BBXQ8WY36 941 aaPredicted RBP20.96■□□□□ 0.95
LRRC56-201ENST00000270115 GADD45BO75293 160 aaPredicted RBP20.95■□□□□ 0.94
LRRC56-201ENST00000270115 NPATQ14207 1427 aa20.95■□□□□ 0.94
LRRC56-201ENST00000270115 PLCB2Q00722 1185 aa20.95■□□□□ 0.94
LRRC56-201ENST00000270115 CHMP4BQ9H444 224 aaKnown RBP20.95■□□□□ 0.94
LRRC56-201ENST00000270115 CABP2Q9NPB3 220 aa20.95■□□□□ 0.94
LRRC56-201ENST00000270115 MED14O60244 1454 aa20.95■□□□□ 0.94
LRRC56-201ENST00000270115 SMARCA5O60264 1052 aaPredicted RBP20.94■□□□□ 0.94
LRRC56-201ENST00000270115 GTF2F1P35269 517 aaKnown RBP eCLIP20.94■□□□□ 0.942e-6■■■□□ 17.9
LRRC56-201ENST00000270115 NEK4P51957 841 aa20.94■□□□□ 0.94
LRRC56-201ENST00000270115 SAFB2Q14151 953 aaKnown RBP eCLIP20.94■□□□□ 0.94
LRRC56-201ENST00000270115 PDCL2Q8N4E4 241 aa20.94■□□□□ 0.94
LRRC56-201ENST00000270115 ADCY5O95622 1261 aa20.94■□□□□ 0.94
LRRC56-201ENST00000270115 KIF20AO95235 890 aa20.93■□□□□ 0.94
LRRC56-201ENST00000270115 TMX3Q96JJ7 454 aa20.93■□□□□ 0.94
LRRC56-201ENST00000270115 VAMP4O75379 141 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms