RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 LRRCC1Q9C099 1032 aa15.92■□□□□ 0.14
SMG9-201ENST00000270066 PEG3Q9GZU2 1588 aa15.91■□□□□ 0.14
SMG9-201ENST00000270066 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
SMG9-201ENST00000270066 C1orf115Q9H7X2 142 aa15.91■□□□□ 0.14
SMG9-201ENST00000270066 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
SMG9-201ENST00000270066 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
SMG9-201ENST00000270066 ATF7IPQ6VMQ6 1270 aa15.91■□□□□ 0.14
SMG9-201ENST00000270066 MYL6BP14649 208 aa15.91■□□□□ 0.14
SMG9-201ENST00000270066 CCDC57Q2TAC2 916 aa15.91■□□□□ 0.14
SMG9-201ENST00000270066 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
SMG9-201ENST00000270066 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
SMG9-201ENST00000270066 MPHOSPH8Q99549 860 aa15.9■□□□□ 0.14
SMG9-201ENST00000270066 FANCAO15360 1455 aa15.9■□□□□ 0.14
SMG9-201ENST00000270066 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.89■□□□□ 0.13
SMG9-201ENST00000270066 NACAP1Q9BZK3 213 aa15.89■□□□□ 0.13
SMG9-201ENST00000270066 PDCP20941 246 aa15.89■□□□□ 0.13
SMG9-201ENST00000270066 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
SMG9-201ENST00000270066 RABEP1Q15276 862 aa15.89■□□□□ 0.13
SMG9-201ENST00000270066 BCAR3O75815 825 aa15.88■□□□□ 0.13
SMG9-201ENST00000270066 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
SMG9-201ENST00000270066 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
SMG9-201ENST00000270066 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
SMG9-201ENST00000270066 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
SMG9-201ENST00000270066 ZNF592Q92610 1267 aa15.87■□□□□ 0.13
SMG9-201ENST00000270066 STARD3NLO95772 234 aa15.87■□□□□ 0.13
SMG9-201ENST00000270066 OLFM4Q6UX06 510 aa15.87■□□□□ 0.13
SMG9-201ENST00000270066 NAT10Q9H0A0 1025 aaKnown RBP15.87■□□□□ 0.13
SMG9-201ENST00000270066 WDR97A6NE52 1622 aa15.87■□□□□ 0.13
SMG9-201ENST00000270066 MTMR7Q9Y216 660 aa15.87■□□□□ 0.13
SMG9-201ENST00000270066 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
SMG9-201ENST00000270066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.86■□□□□ 0.13
SMG9-201ENST00000270066 TMPOP42166 694 aaKnown RBP15.86■□□□□ 0.13
SMG9-201ENST00000270066 CCAR2Q8N163 923 aaKnown RBP15.86■□□□□ 0.13
SMG9-201ENST00000270066 SIL1Q9H173 461 aa15.86■□□□□ 0.13
SMG9-201ENST00000270066 AMOTQ4VCS5 1084 aa15.86■□□□□ 0.13
SMG9-201ENST00000270066 RRP12Q5JTH9 1297 aaKnown RBP15.85■□□□□ 0.13
SMG9-201ENST00000270066 PHF8Q9UPP1 1060 aa15.85■□□□□ 0.13
SMG9-201ENST00000270066 LRPPRCP42704 1394 aaKnown RBP15.85■□□□□ 0.13
SMG9-201ENST00000270066 NEK4P51957 841 aa15.85■□□□□ 0.13
SMG9-201ENST00000270066 ANKRD1Q15327 319 aa15.85■□□□□ 0.13
SMG9-201ENST00000270066 NCOA1Q15788 1441 aa15.85■□□□□ 0.13
SMG9-201ENST00000270066 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
SMG9-201ENST00000270066 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
SMG9-201ENST00000270066 WASLO00401 505 aaPredicted RBP15.84■□□□□ 0.13
SMG9-201ENST00000270066 ZNF396Q96N95 335 aaPredicted RBP15.84■□□□□ 0.13
SMG9-201ENST00000270066 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
SMG9-201ENST00000270066 CEP126Q9P2H0 1117 aa15.84■□□□□ 0.13
SMG9-201ENST00000270066 CYP46A1Q9Y6A2 500 aa15.83■□□□□ 0.13
SMG9-201ENST00000270066 SRGAP3O43295 1099 aa15.83■□□□□ 0.12
SMG9-201ENST00000270066 LETM1O95202 739 aaPredicted RBP15.83■□□□□ 0.12
SMG9-201ENST00000270066 RPAP2Q8IXW5 612 aaPredicted RBP15.83■□□□□ 0.12
SMG9-201ENST00000270066 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
SMG9-201ENST00000270066 MRE11P49959 708 aa15.83■□□□□ 0.12
SMG9-201ENST00000270066 GPS2Q13227 327 aa15.83■□□□□ 0.12
SMG9-201ENST00000270066 AACSQ86V21 672 aa15.83■□□□□ 0.12
SMG9-201ENST00000270066 SDF4Q9BRK5 362 aa15.83■□□□□ 0.12
SMG9-201ENST00000270066 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
SMG9-201ENST00000270066 TXLNAP40222 546 aa15.82■□□□□ 0.12
SMG9-201ENST00000270066 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
SMG9-201ENST00000270066 ZNF652Q9Y2D9 606 aa15.82■□□□□ 0.12
SMG9-201ENST00000270066 IGHMBP2P38935 993 aaKnown RBP15.82■□□□□ 0.12
SMG9-201ENST00000270066 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
SMG9-201ENST00000270066 IDI1Q13907 227 aa15.81■□□□□ 0.12
SMG9-201ENST00000270066 EPS15P42566 896 aa15.81■□□□□ 0.12
SMG9-201ENST00000270066 RBM10P98175 930 aaKnown RBP15.81■□□□□ 0.12
SMG9-201ENST00000270066 FBXO31Q5XUX0 539 aaPredicted RBP15.81■□□□□ 0.12
SMG9-201ENST00000270066 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
SMG9-201ENST00000270066 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
SMG9-201ENST00000270066 CDK5RAP3Q96JB5 506 aa15.81■□□□□ 0.12
SMG9-201ENST00000270066 SCAF11Q99590 1463 aaKnown RBP15.81■□□□□ 0.12
SMG9-201ENST00000270066 BCL11BQ9C0K0 894 aaPredicted RBP15.81■□□□□ 0.12
SMG9-201ENST00000270066 CHD1LQ86WJ1 897 aa15.81■□□□□ 0.12
SMG9-201ENST00000270066 NSD2O96028 1365 aa15.81■□□□□ 0.12
SMG9-201ENST00000270066 TRIM22Q8IYM9 498 aa15.8■□□□□ 0.12
SMG9-201ENST00000270066 ADGRF5Q8IZF2 1346 aa15.8■□□□□ 0.12
SMG9-201ENST00000270066 MBD3O95983 291 aa15.8■□□□□ 0.12
SMG9-201ENST00000270066 SLFN5Q08AF3 891 aa15.8■□□□□ 0.12
SMG9-201ENST00000270066 CCAR1Q8IX12 1150 aaKnown RBP15.8■□□□□ 0.12
SMG9-201ENST00000270066 NOS1P29475 1434 aa15.8■□□□□ 0.12
SMG9-201ENST00000270066 AEBP1Q8IUX7 1158 aa15.8■□□□□ 0.12
SMG9-201ENST00000270066 CTNNA3Q9UI47 895 aa15.8■□□□□ 0.12
SMG9-201ENST00000270066 TEX14Q8IWB6 1497 aa15.79■□□□□ 0.12
SMG9-201ENST00000270066 CCDC69A6NI79 296 aa15.79■□□□□ 0.12
SMG9-201ENST00000270066 DUSP27Q5VZP5 1158 aa15.79■□□□□ 0.12
SMG9-201ENST00000270066 TAF7Q15545 349 aaPredicted RBP15.79■□□□□ 0.12
SMG9-201ENST00000270066 NME9Q86XW9 330 aa15.79■□□□□ 0.12
SMG9-201ENST00000270066 KINO60870 393 aaKnown RBP15.79■□□□□ 0.12
SMG9-201ENST00000270066 NASPP49321 788 aaPredicted RBP15.79■□□□□ 0.12
SMG9-201ENST00000270066 TRAK2O60296 914 aa15.78■□□□□ 0.12
SMG9-201ENST00000270066 LARP1Q6PKG0 1096 aaKnown RBP15.78■□□□□ 0.12
SMG9-201ENST00000270066 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
SMG9-201ENST00000270066 THOC2Q8NI27 1593 aaKnown RBP15.78■□□□□ 0.12
SMG9-201ENST00000270066 KDM4AO75164 1064 aa15.78■□□□□ 0.12
SMG9-201ENST00000270066 FKBP4Q02790 459 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMG9-201ENST00000270066 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
SMG9-201ENST00000270066 RAPGEF6Q8TEU7 1601 aa15.78■□□□□ 0.12
SMG9-201ENST00000270066 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
SMG9-201ENST00000270066 ATP2B2Q01814 1243 aa15.77■□□□□ 0.12
SMG9-201ENST00000270066 STK38Q15208 465 aa15.77■□□□□ 0.12
SMG9-201ENST00000270066 TTC21BQ7Z4L5 1316 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms