RNA–Protein interactions for RNA: ENST00000266943.10

SLC46A3-201, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC46A3, Length 3,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-201ENST00000266943 C19orf44Q9H6X5 657 aa18.6■□□□□ 0.57
SLC46A3-201ENST00000266943 SBNO1A3KN83 1393 aa18.6■□□□□ 0.57
SLC46A3-201ENST00000266943 EXOC6Q8TAG9 804 aa18.59■□□□□ 0.57
SLC46A3-201ENST00000266943 KIF1AQ12756 1690 aa18.59■□□□□ 0.57
SLC46A3-201ENST00000266943 FOXO3O43524 673 aa18.59■□□□□ 0.57
SLC46A3-201ENST00000266943 PSME1Q06323 249 aa18.59■□□□□ 0.57
SLC46A3-201ENST00000266943 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
SLC46A3-201ENST00000266943 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
SLC46A3-201ENST00000266943 FLT4P35916 1363 aa18.59■□□□□ 0.57
SLC46A3-201ENST00000266943 MST1RQ04912 1400 aa18.58■□□□□ 0.57
SLC46A3-201ENST00000266943 NFAT5O94916 1531 aa18.58■□□□□ 0.56
SLC46A3-201ENST00000266943 BCAR3O75815 825 aa18.57■□□□□ 0.56
SLC46A3-201ENST00000266943 TSR2Q969E8 191 aaKnown RBP18.56■□□□□ 0.56
SLC46A3-201ENST00000266943 SULT6B1Q6IMI4 303 aa18.56■□□□□ 0.56
SLC46A3-201ENST00000266943 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
SLC46A3-201ENST00000266943 FANCIQ9NVI1 1328 aa18.55■□□□□ 0.56
SLC46A3-201ENST00000266943 DCCP43146 1447 aa18.54■□□□□ 0.56
SLC46A3-201ENST00000266943 AMPHP49418 695 aa18.54■□□□□ 0.56
SLC46A3-201ENST00000266943 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
SLC46A3-201ENST00000266943 THUMPD2Q9BTF0 503 aaKnown RBP18.53■□□□□ 0.56
SLC46A3-201ENST00000266943 NCOA3Q9Y6Q9 1424 aa18.53■□□□□ 0.56
SLC46A3-201ENST00000266943 HOXC9P31274 260 aa18.53■□□□□ 0.56
SLC46A3-201ENST00000266943 MYH16Q9H6N6 1097 aa18.53■□□□□ 0.56
SLC46A3-201ENST00000266943 ALS2Q96Q42 1657 aa18.52■□□□□ 0.56
SLC46A3-201ENST00000266943 NEFMP07197 916 aa18.52■□□□□ 0.56
SLC46A3-201ENST00000266943 ATF3P18847 181 aa18.52■□□□□ 0.56
SLC46A3-201ENST00000266943 DDX17Q92841 729 aaKnown RBP18.52■□□□□ 0.56
SLC46A3-201ENST00000266943 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
SLC46A3-201ENST00000266943 ZNF335Q9H4Z2 1342 aaPredicted RBP18.51■□□□□ 0.55
SLC46A3-201ENST00000266943 SLIT3O75094 1523 aa18.51■□□□□ 0.55
SLC46A3-201ENST00000266943 IL16Q14005 1332 aa18.5■□□□□ 0.55
SLC46A3-201ENST00000266943 PLEKHG5O94827 1062 aa18.5■□□□□ 0.55
SLC46A3-201ENST00000266943 FAM83GA6ND36 823 aa18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 KRT28Q7Z3Y7 464 aa18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 EYA1Q99502 592 aa18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 PHRF1Q9P1Y6 1649 aaKnown RBP18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 KIF24Q5T7B8 1368 aa18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
SLC46A3-201ENST00000266943 KDRP35968 1356 aa18.48■□□□□ 0.55
SLC46A3-201ENST00000266943 EXOSC9Q06265 439 aaKnown RBP18.48■□□□□ 0.55
SLC46A3-201ENST00000266943 RGPD2P0DJD1 1756 aa18.48■□□□□ 0.55
SLC46A3-201ENST00000266943 MSH6P52701 1360 aa18.48■□□□□ 0.55
SLC46A3-201ENST00000266943 BCL2L13Q9BXK5 485 aa18.48■□□□□ 0.55
SLC46A3-201ENST00000266943 RTL1A6NKG5 1358 aa18.47■□□□□ 0.55
SLC46A3-201ENST00000266943 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
SLC46A3-201ENST00000266943 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
SLC46A3-201ENST00000266943 MED1Q15648 1581 aaPredicted RBP18.46■□□□□ 0.55
SLC46A3-201ENST00000266943 LTV1Q96GA3 475 aaPredicted RBP18.46■□□□□ 0.55
SLC46A3-201ENST00000266943 CADPS2Q86UW7 1296 aa18.46■□□□□ 0.55
SLC46A3-201ENST00000266943 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.45■□□□□ 0.54
SLC46A3-201ENST00000266943 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
SLC46A3-201ENST00000266943 USP19O94966 1318 aa18.45■□□□□ 0.54
SLC46A3-201ENST00000266943 ZBTB7CA1YPR0 619 aa18.44■□□□□ 0.54
SLC46A3-201ENST00000266943 GCP02774 474 aa18.44■□□□□ 0.54
SLC46A3-201ENST00000266943 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
SLC46A3-201ENST00000266943 IP6K1Q92551 441 aa18.43■□□□□ 0.54
SLC46A3-201ENST00000266943 RGPD5Q99666 1765 aa18.43■□□□□ 0.54
SLC46A3-201ENST00000266943 PXDNQ92626 1479 aa18.43■□□□□ 0.54
SLC46A3-201ENST00000266943 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
SLC46A3-201ENST00000266943 TSHZ2Q9NRE2 1034 aa18.42■□□□□ 0.54
SLC46A3-201ENST00000266943 USHBP1Q8N6Y0 703 aa18.42■□□□□ 0.54
SLC46A3-201ENST00000266943 FRAT1Q92837 279 aaPredicted RBP18.42■□□□□ 0.54
SLC46A3-201ENST00000266943 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
SLC46A3-201ENST00000266943 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
SLC46A3-201ENST00000266943 CRYBG1Q9Y4K1 1723 aa18.41■□□□□ 0.54
SLC46A3-201ENST00000266943 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
SLC46A3-201ENST00000266943 MCM10Q7L590 875 aa18.4■□□□□ 0.54
SLC46A3-201ENST00000266943 MBIPQ9NS73 344 aa18.4■□□□□ 0.54
SLC46A3-201ENST00000266943 ARHGEF25Q86VW2 580 aa18.4■□□□□ 0.54
SLC46A3-201ENST00000266943 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
SLC46A3-201ENST00000266943 PANK1Q8TE04 598 aa18.4■□□□□ 0.54
SLC46A3-201ENST00000266943 BRINP3Q76B58 766 aa18.39■□□□□ 0.53
SLC46A3-201ENST00000266943 CT47B1P0C2W7 299 aaPredicted RBP18.38■□□□□ 0.53
SLC46A3-201ENST00000266943 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
SLC46A3-201ENST00000266943 SSH1Q8WYL5 1049 aa18.38■□□□□ 0.53
SLC46A3-201ENST00000266943 NPHP3Q7Z494 1330 aa18.38■□□□□ 0.53
SLC46A3-201ENST00000266943 CALD1Q05682 793 aaKnown RBP18.38■□□□□ 0.53
SLC46A3-201ENST00000266943 NBPF6Q5VWK0 638 aa18.38■□□□□ 0.53
SLC46A3-201ENST00000266943 NBPF4Q96M43 638 aa18.38■□□□□ 0.53
SLC46A3-201ENST00000266943 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
SLC46A3-201ENST00000266943 RLBP1P12271 317 aa18.37■□□□□ 0.53
SLC46A3-201ENST00000266943 GNAI1P63096 354 aa18.37■□□□□ 0.53
SLC46A3-201ENST00000266943 TSPYL6Q8N831 410 aa18.37■□□□□ 0.53
SLC46A3-201ENST00000266943 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
SLC46A3-201ENST00000266943 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
SLC46A3-201ENST00000266943 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
SLC46A3-201ENST00000266943 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
SLC46A3-201ENST00000266943 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
SLC46A3-201ENST00000266943 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
SLC46A3-201ENST00000266943 CRB1P82279 1406 aa18.36■□□□□ 0.53
SLC46A3-201ENST00000266943 CAMTA1Q9Y6Y1 1673 aa18.35■□□□□ 0.53
SLC46A3-201ENST00000266943 CABLES1Q8TDN4 633 aa18.35■□□□□ 0.53
SLC46A3-201ENST00000266943 COG6Q9Y2V7 657 aa18.35■□□□□ 0.53
SLC46A3-201ENST00000266943 ZC3H6P61129 1189 aaKnown RBP18.34■□□□□ 0.53
SLC46A3-201ENST00000266943 COL18A1P39060 1754 aa18.34■□□□□ 0.53
SLC46A3-201ENST00000266943 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
SLC46A3-201ENST00000266943 SLAIN2Q9P270 581 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms