RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.2
TCTN3-201ENST00000265993 REREQ9P2R6 1566 aa13.77□□□□□ -0.2
TCTN3-201ENST00000265993 CEBPAP49715 358 aaPredicted RBP13.77□□□□□ -0.21
TCTN3-201ENST00000265993 HDAC1Q13547 482 aaPredicted RBP13.77□□□□□ -0.21
TCTN3-201ENST00000265993 ROBO2Q9HCK4 1378 aa13.77□□□□□ -0.21
TCTN3-201ENST00000265993 UPF2Q9HAU5 1272 aaKnown RBP13.77□□□□□ -0.21
TCTN3-201ENST00000265993 IPO8O15397 1037 aaKnown RBP13.76□□□□□ -0.21
TCTN3-201ENST00000265993 KRT24Q2M2I5 525 aa13.76□□□□□ -0.21
TCTN3-201ENST00000265993 CDC42BPGQ6DT37 1551 aa13.76□□□□□ -0.21
TCTN3-201ENST00000265993 C8orf58Q8NAV2 365 aa13.76□□□□□ -0.21
TCTN3-201ENST00000265993 SLC26A8Q96RN1 970 aa13.76□□□□□ -0.21
TCTN3-201ENST00000265993 GSE1Q14687 1217 aa13.75□□□□□ -0.21
TCTN3-201ENST00000265993 SMC5Q8IY18 1101 aa13.75□□□□□ -0.21
TCTN3-201ENST00000265993 TBC1D2Q9BYX2 928 aa13.75□□□□□ -0.21
TCTN3-201ENST00000265993 LTKP29376 864 aa13.75□□□□□ -0.21
TCTN3-201ENST00000265993 ALDH1L2Q3SY69 923 aa13.75□□□□□ -0.21
TCTN3-201ENST00000265993 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
TCTN3-201ENST00000265993 TWISTNBQ3B726 338 aaPredicted RBP13.74□□□□□ -0.21
TCTN3-201ENST00000265993 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
TCTN3-201ENST00000265993 KIF13AQ9H1H9 1805 aa13.74□□□□□ -0.21
TCTN3-201ENST00000265993 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
TCTN3-201ENST00000265993 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
TCTN3-201ENST00000265993 BECN1Q14457 450 aa13.73□□□□□ -0.21
TCTN3-201ENST00000265993 TNRQ92752 1358 aa13.73□□□□□ -0.21
TCTN3-201ENST00000265993 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
TCTN3-201ENST00000265993 ZBTB7BO15156 539 aaPredicted RBP13.72□□□□□ -0.21
TCTN3-201ENST00000265993 GNAI1P63096 354 aa13.72□□□□□ -0.21
TCTN3-201ENST00000265993 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
TCTN3-201ENST00000265993 MON2Q7Z3U7 1717 aa13.72□□□□□ -0.21
TCTN3-201ENST00000265993 ACEP12821 1306 aa13.72□□□□□ -0.21
TCTN3-201ENST00000265993 MCM10Q7L590 875 aa13.72□□□□□ -0.21
TCTN3-201ENST00000265993 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
TCTN3-201ENST00000265993 TMEM2Q9UHN6 1383 aa13.71□□□□□ -0.21
TCTN3-201ENST00000265993 ZNF853P0CG23 659 aa13.71□□□□□ -0.21
TCTN3-201ENST00000265993 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.21
TCTN3-201ENST00000265993 C22orf23Q9BZE7 217 aa13.71□□□□□ -0.21
TCTN3-201ENST00000265993 ANKRD45Q5TZF3 282 aa13.71□□□□□ -0.21
TCTN3-201ENST00000265993 ITSN1Q15811 1721 aa13.71□□□□□ -0.22
TCTN3-201ENST00000265993 SIRT2Q8IXJ6 389 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 BRPF3Q9ULD4 1205 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 C3P01024 1663 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 NUCB1Q02818 461 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 CHD1LQ86WJ1 897 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 AKAP12Q02952 1782 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 ANTXR1Q9H6X2 564 aa13.7□□□□□ -0.22
TCTN3-201ENST00000265993 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
TCTN3-201ENST00000265993 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
TCTN3-201ENST00000265993 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
TCTN3-201ENST00000265993 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
TCTN3-201ENST00000265993 UBR1Q8IWV7 1749 aa13.69□□□□□ -0.22
TCTN3-201ENST00000265993 TECPR2O15040 1411 aa13.68□□□□□ -0.22
TCTN3-201ENST00000265993 FOXO3O43524 673 aa13.68□□□□□ -0.22
TCTN3-201ENST00000265993 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
TCTN3-201ENST00000265993 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
TCTN3-201ENST00000265993 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
TCTN3-201ENST00000265993 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
TCTN3-201ENST00000265993 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
TCTN3-201ENST00000265993 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
TCTN3-201ENST00000265993 ABCC4O15439 1325 aa13.66□□□□□ -0.22
TCTN3-201ENST00000265993 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
TCTN3-201ENST00000265993 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
TCTN3-201ENST00000265993 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.22
TCTN3-201ENST00000265993 RGPD8O14715 1765 aaPredicted RBP13.65□□□□□ -0.23
TCTN3-201ENST00000265993 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
TCTN3-201ENST00000265993 NUTM2GQ5VZR2 741 aa13.64□□□□□ -0.23
TCTN3-201ENST00000265993 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
TCTN3-201ENST00000265993 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
TCTN3-201ENST00000265993 APBB1O00213 710 aa13.64□□□□□ -0.23
TCTN3-201ENST00000265993 ARXQ96QS3 562 aa13.64□□□□□ -0.23
TCTN3-201ENST00000265993 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
TCTN3-201ENST00000265993 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
TCTN3-201ENST00000265993 USP6P35125 1406 aa13.63□□□□□ -0.23
TCTN3-201ENST00000265993 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
TCTN3-201ENST00000265993 OVOS2A0A0J9YW53 1432 aa13.63□□□□□ -0.23
TCTN3-201ENST00000265993 OVOS2Q6IE36 1432 aa13.63□□□□□ -0.23
TCTN3-201ENST00000265993 MAP3K19Q56UN5 1328 aa13.62□□□□□ -0.23
TCTN3-201ENST00000265993 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
TCTN3-201ENST00000265993 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
TCTN3-201ENST00000265993 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
TCTN3-201ENST00000265993 SETD1BQ9UPS6 1966 aaKnown RBP13.61□□□□□ -0.23
TCTN3-201ENST00000265993 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
TCTN3-201ENST00000265993 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
TCTN3-201ENST00000265993 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
TCTN3-201ENST00000265993 API5Q9BZZ5 524 aaKnown RBP13.61□□□□□ -0.23
TCTN3-201ENST00000265993 CHL1O00533 1208 aa13.6□□□□□ -0.23
TCTN3-201ENST00000265993 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
TCTN3-201ENST00000265993 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
TCTN3-201ENST00000265993 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
TCTN3-201ENST00000265993 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
TCTN3-201ENST00000265993 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
TCTN3-201ENST00000265993 PLEKHG1Q9ULL1 1385 aa13.6□□□□□ -0.23
TCTN3-201ENST00000265993 CD2BP2O95400 341 aaKnown RBP13.6□□□□□ -0.23
TCTN3-201ENST00000265993 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
TCTN3-201ENST00000265993 F6X3S4 739 aa13.59□□□□□ -0.23
TCTN3-201ENST00000265993 MSH6P52701 1360 aa13.59□□□□□ -0.23
TCTN3-201ENST00000265993 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
TCTN3-201ENST00000265993 G2E3Q7L622 706 aa13.59□□□□□ -0.23
TCTN3-201ENST00000265993 MEIS3Q99687 375 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms