RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZFP91Q96JP5 570 aaPredicted RBP10.82□□□□□ -0.68
VAPB-201ENST00000265619 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
VAPB-201ENST00000265619 RRP7AQ9Y3A4 280 aaKnown RBP10.82□□□□□ -0.68
VAPB-201ENST00000265619 MLH3Q9UHC1 1453 aa10.82□□□□□ -0.68
VAPB-201ENST00000265619 DIP2BQ9P265 1576 aa10.82□□□□□ -0.68
VAPB-201ENST00000265619 KCNJ4P48050 445 aa10.82□□□□□ -0.68
VAPB-201ENST00000265619 ZNF771Q7L3S4 317 aaPredicted RBP10.82□□□□□ -0.68
VAPB-201ENST00000265619 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
VAPB-201ENST00000265619 CFAP74Q9C0B2 1584 aa10.81□□□□□ -0.68
VAPB-201ENST00000265619 PRPF40AO75400 957 aaKnown RBP10.81□□□□□ -0.68
VAPB-201ENST00000265619 FTSJ3Q8IY81 847 aaKnown RBP10.81□□□□□ -0.68
VAPB-201ENST00000265619 SLC12A5Q9H2X9 1139 aa10.81□□□□□ -0.68
VAPB-201ENST00000265619 TTC12Q9H892 705 aaPredicted RBP10.81□□□□□ -0.68
VAPB-201ENST00000265619 FRMPD1Q5SYB0 1578 aa10.8□□□□□ -0.68
VAPB-201ENST00000265619 CCDC39Q9UFE4 941 aa10.8□□□□□ -0.68
VAPB-201ENST00000265619 SPHKAPQ2M3C7 1700 aa10.8□□□□□ -0.68
VAPB-201ENST00000265619 GTF2F1P35269 517 aaKnown RBP eCLIP10.8□□□□□ -0.68
VAPB-201ENST00000265619 KIAA2012Q0VF49 1180 aa10.8□□□□□ -0.68
VAPB-201ENST00000265619 PDCL2Q8N4E4 241 aa10.8□□□□□ -0.68
VAPB-201ENST00000265619 RWDD1Q9H446 243 aaPredicted RBP10.8□□□□□ -0.68
VAPB-201ENST00000265619 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
VAPB-201ENST00000265619 K7ELQ4 463 aaPredicted RBP10.8□□□□□ -0.68
VAPB-201ENST00000265619 CAPN2P17655 700 aa10.79□□□□□ -0.68
VAPB-201ENST00000265619 CHMP4CQ96CF2 233 aa10.79□□□□□ -0.68
VAPB-201ENST00000265619 TET3O43151 1660 aa10.79□□□□□ -0.68
VAPB-201ENST00000265619 ZMYM3Q14202 1370 aa10.79□□□□□ -0.68
VAPB-201ENST00000265619 TRPM1Q7Z4N2 1603 aa10.79□□□□□ -0.68
VAPB-201ENST00000265619 FOXD4L5Q5VV16 416 aaPredicted RBP10.79□□□□□ -0.68
VAPB-201ENST00000265619 WAPLQ7Z5K2 1190 aa10.79□□□□□ -0.68
VAPB-201ENST00000265619 WWC1Q8IX03 1113 aa10.79□□□□□ -0.68
VAPB-201ENST00000265619 FOXD4L4Q8WXT5 416 aaPredicted RBP10.79□□□□□ -0.68
VAPB-201ENST00000265619 CLEC17AQ6ZS10 378 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 SLC26A8Q96RN1 970 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 TRPM2O94759 1503 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
VAPB-201ENST00000265619 MCM5P33992 734 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.68
VAPB-201ENST00000265619 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 PRAM1Q96QH2 718 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 EFCAB6Q5THR3 1501 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 SOX12O15370 315 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 PTMAP06454 111 aaKnown RBP10.78□□□□□ -0.68
VAPB-201ENST00000265619 NAA30Q147X3 362 aaPredicted RBP10.78□□□□□ -0.68
VAPB-201ENST00000265619 AEBP1Q8IUX7 1158 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
VAPB-201ENST00000265619 KIF3AQ9Y496 699 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 ABCC3O15438 1527 aa10.78□□□□□ -0.68
VAPB-201ENST00000265619 PPP6R1Q9UPN7 881 aa10.77□□□□□ -0.68
VAPB-201ENST00000265619 MROH1Q8NDA8 1641 aa10.77□□□□□ -0.68
VAPB-201ENST00000265619 GOLGA6L22H0YM25 854 aa10.77□□□□□ -0.69
VAPB-201ENST00000265619 SLFN14P0C7P3 912 aa10.77□□□□□ -0.69
VAPB-201ENST00000265619 LRSAM1Q6UWE0 723 aa10.77□□□□□ -0.69
VAPB-201ENST00000265619 TXNDC2Q86VQ3 553 aa10.77□□□□□ -0.69
VAPB-201ENST00000265619 LNPKQ9C0E8 428 aa10.77□□□□□ -0.69
VAPB-201ENST00000265619 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.69
VAPB-201ENST00000265619 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
VAPB-201ENST00000265619 HMGN5P82970 282 aaKnown RBP10.76□□□□□ -0.69
VAPB-201ENST00000265619 ZGPATQ8N5A5 531 aaKnown RBP10.76□□□□□ -0.69
VAPB-201ENST00000265619 PTPRTO14522 1441 aa10.76□□□□□ -0.69
VAPB-201ENST00000265619 SECISBP2LQ93073 1101 aaKnown RBP10.76□□□□□ -0.69
VAPB-201ENST00000265619 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
VAPB-201ENST00000265619 CDCA8Q53HL2 280 aa10.76□□□□□ -0.69
VAPB-201ENST00000265619 ARHGAP31Q2M1Z3 1444 aa10.75□□□□□ -0.69
VAPB-201ENST00000265619 CYP2E1P05181 493 aaPredicted RBP10.75□□□□□ -0.69
VAPB-201ENST00000265619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.691e-7■■□□□ 14.1
VAPB-201ENST00000265619 PIBF1Q8WXW3 757 aa10.75□□□□□ -0.69
VAPB-201ENST00000265619 HSP90B1P14625 803 aaKnown RBP10.75□□□□□ -0.69
VAPB-201ENST00000265619 ANKRD7Q92527 254 aa10.75□□□□□ -0.69
VAPB-201ENST00000265619 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
VAPB-201ENST00000265619 RNF17Q9BXT8 1623 aaKnown RBP10.75□□□□□ -0.69
VAPB-201ENST00000265619 KIF1BO60333 1816 aa10.75□□□□□ -0.69
VAPB-201ENST00000265619 PTMSP20962 102 aa10.75□□□□□ -0.69
VAPB-201ENST00000265619 MVPQ14764 893 aaKnown RBP10.75□□□□□ -0.69
VAPB-201ENST00000265619 RICTORQ6R327 1708 aa10.74□□□□□ -0.69
VAPB-201ENST00000265619 SCAF11Q99590 1463 aaKnown RBP10.73□□□□□ -0.69
VAPB-201ENST00000265619 C14orf93Q9H972 538 aaKnown RBP10.73□□□□□ -0.69
VAPB-201ENST00000265619 NINLQ9Y2I6 1382 aa10.73□□□□□ -0.69
VAPB-201ENST00000265619 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
VAPB-201ENST00000265619 ERICH4A6NGS2 130 aa10.73□□□□□ -0.69
VAPB-201ENST00000265619 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
VAPB-201ENST00000265619 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
VAPB-201ENST00000265619 USP25Q9UHP3 1055 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 KIF16BQ96L93 1317 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 TBC1D9Q6ZT07 1266 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 MORC1Q86VD1 984 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 DEPDC5O75140 1603 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 TRIM34Q9BYJ4 488 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
VAPB-201ENST00000265619 NCKAP5LQ9HCH0 1330 aa10.71□□□□□ -0.69
VAPB-201ENST00000265619 FBLN1P23142 703 aa10.71□□□□□ -0.69
VAPB-201ENST00000265619 NCBP1Q09161 790 aaKnown RBP10.71□□□□□ -0.69
VAPB-201ENST00000265619 TAF3Q5VWG9 929 aa10.71□□□□□ -0.69
VAPB-201ENST00000265619 RGS22Q8NE09 1264 aa10.71□□□□□ -0.69
VAPB-201ENST00000265619 GGNBP2Q9H3C7 697 aa10.71□□□□□ -0.69
VAPB-201ENST00000265619 FOXD4L6Q3SYB3 417 aaPredicted RBP10.71□□□□□ -0.7
VAPB-201ENST00000265619 FOXD4L3Q6VB84 417 aaPredicted RBP10.71□□□□□ -0.7
VAPB-201ENST00000265619 EIF2AK4Q9P2K8 1649 aaKnown RBP10.71□□□□□ -0.7
VAPB-201ENST00000265619 CAMSAP1Q5T5Y3 1602 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms