RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TXNDC2Q86VQ3 553 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 FAM184AQ8NB25 1140 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 SF3A1Q15459 793 aaKnown RBP20.61■□□□□ 0.89
SRF-201ENST00000265354 CHMP4AQ9BY43 222 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 UBTFL1P0CB47 393 aaPredicted RBP20.6■□□□□ 0.89
SRF-201ENST00000265354 TTC12Q9H892 705 aaPredicted RBP20.6■□□□□ 0.89
SRF-201ENST00000265354 FMNL2Q96PY5 1086 aa20.6■□□□□ 0.89
SRF-201ENST00000265354 SDSP20132 328 aa20.6■□□□□ 0.89
SRF-201ENST00000265354 CWC27Q6UX04 472 aaKnown RBP20.6■□□□□ 0.89
SRF-201ENST00000265354 SCAF11Q99590 1463 aaKnown RBP20.59■□□□□ 0.89
SRF-201ENST00000265354 RBSNQ9H1K0 784 aa20.59■□□□□ 0.89
SRF-201ENST00000265354 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
SRF-201ENST00000265354 GNL2Q13823 731 aaKnown RBP20.59■□□□□ 0.89
SRF-201ENST00000265354 TSC1Q92574 1164 aa20.59■□□□□ 0.89
SRF-201ENST00000265354 PKP1Q13835 747 aa20.59■□□□□ 0.89
SRF-201ENST00000265354 CD2BP2O95400 341 aaKnown RBP20.58■□□□□ 0.89
SRF-201ENST00000265354 IFIT2P09913 472 aaKnown RBP20.58■□□□□ 0.89
SRF-201ENST00000265354 RAPGEF3O95398 923 aa20.58■□□□□ 0.88
SRF-201ENST00000265354 HCLS1P14317 486 aaPredicted RBP20.58■□□□□ 0.88
SRF-201ENST00000265354 GNAI2P04899 355 aa20.58■□□□□ 0.88
SRF-201ENST00000265354 GPATCH3Q96I76 525 aa20.58■□□□□ 0.88
SRF-201ENST00000265354 MBIPQ9NS73 344 aa20.58■□□□□ 0.88
SRF-201ENST00000265354 CREBRFQ8IUR6 639 aa20.57■□□□□ 0.88
SRF-201ENST00000265354 LRRCC1Q9C099 1032 aa20.57■□□□□ 0.88
SRF-201ENST00000265354 NME9Q86XW9 330 aa20.57■□□□□ 0.88
SRF-201ENST00000265354 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
SRF-201ENST00000265354 BLMP54132 1417 aaPredicted RBP20.57■□□□□ 0.88
SRF-201ENST00000265354 KDM4AO75164 1064 aa20.57■□□□□ 0.88
SRF-201ENST00000265354 AIMP1Q12904 312 aaKnown RBP20.57■□□□□ 0.88
SRF-201ENST00000265354 ASXL1Q8IXJ9 1541 aa20.57■□□□□ 0.88
SRF-201ENST00000265354 SASS6Q6UVJ0 657 aa20.56■□□□□ 0.88
SRF-201ENST00000265354 ZMYM4Q5VZL5 1548 aa20.56■□□□□ 0.88
SRF-201ENST00000265354 TPD52L1Q16890 204 aaPredicted RBP20.56■□□□□ 0.88
SRF-201ENST00000265354 PHACTR3Q96KR7 559 aa20.56■□□□□ 0.88
SRF-201ENST00000265354 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
SRF-201ENST00000265354 MEIS3Q99687 375 aa20.56■□□□□ 0.88
SRF-201ENST00000265354 C17orf53Q8N3J3 647 aaPredicted RBP20.55■□□□□ 0.88
SRF-201ENST00000265354 SNX21Q969T3 373 aa20.55■□□□□ 0.88
SRF-201ENST00000265354 KIF3AQ9Y496 699 aa20.55■□□□□ 0.88
SRF-201ENST00000265354 COL17A1Q9UMD9 1497 aaPredicted RBP20.55■□□□□ 0.88
SRF-201ENST00000265354 ZNF521Q96K83 1311 aa20.54■□□□□ 0.88
SRF-201ENST00000265354 HMGN5P82970 282 aaKnown RBP20.54■□□□□ 0.88
SRF-201ENST00000265354 CGNQ9P2M7 1197 aaKnown RBP20.54■□□□□ 0.88
SRF-201ENST00000265354 MTERF4Q7Z6M4 381 aaKnown RBP20.54■□□□□ 0.88
SRF-201ENST00000265354 TMX3Q96JJ7 454 aa20.54■□□□□ 0.88
SRF-201ENST00000265354 WDR33Q9C0J8 1336 aaKnown RBP20.54■□□□□ 0.88
SRF-201ENST00000265354 FYB1O15117 783 aa20.54■□□□□ 0.88
SRF-201ENST00000265354 ALDH1L2Q3SY69 923 aa20.54■□□□□ 0.88
SRF-201ENST00000265354 KDM5BQ9UGL1 1544 aa20.54■□□□□ 0.88
SRF-201ENST00000265354 RPAP2Q8IXW5 612 aaPredicted RBP20.53■□□□□ 0.88
SRF-201ENST00000265354 HOMER1Q86YM7 354 aa20.53■□□□□ 0.88
SRF-201ENST00000265354 A2MP01023 1474 aa20.53■□□□□ 0.88
SRF-201ENST00000265354 HTATSF1O43719 755 aaKnown RBP20.53■□□□□ 0.88
SRF-201ENST00000265354 PPFIA3O75145 1194 aa20.53■□□□□ 0.88
SRF-201ENST00000265354 CCDC83Q8IWF9 413 aa20.53■□□□□ 0.88
SRF-201ENST00000265354 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.53■□□□□ 0.88
SRF-201ENST00000265354 GORABQ5T7V8 394 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 MCM2P49736 904 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 TTC22Q5TAA0 569 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 PAXIP1Q6ZW49 1069 aaPredicted RBP20.52■□□□□ 0.88
SRF-201ENST00000265354 CKAP2LQ8IYA6 745 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 OFD1O75665 1012 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 ADCY5O95622 1261 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 GIMAP6Q6P9H5 292 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 FILIP1Q7Z7B0 1213 aa20.52■□□□□ 0.88
SRF-201ENST00000265354 TEFQ10587 303 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 RUFY2Q8WXA3 655 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 MAGI2Q86UL8 1455 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 FAM135AQ9P2D6 1515 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 ZRANB1Q9UGI0 708 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 SPG7Q9UQ90 795 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 TRMT2AQ8IZ69 625 aaKnown RBP20.51■□□□□ 0.87
SRF-201ENST00000265354 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
SRF-201ENST00000265354 PDCL2Q8N4E4 241 aa20.5■□□□□ 0.87
SRF-201ENST00000265354 FSD2A1L4K1 749 aa20.5■□□□□ 0.87
SRF-201ENST00000265354 NOS1P29475 1434 aa20.5■□□□□ 0.87
SRF-201ENST00000265354 VGLL3A8MV65 326 aa20.5■□□□□ 0.87
SRF-201ENST00000265354 GNAI3P08754 354 aa20.5■□□□□ 0.87
SRF-201ENST00000265354 LARP1BQ659C4 914 aaKnown RBP20.5■□□□□ 0.87
SRF-201ENST00000265354 ZKSCAN5Q9Y2L8 839 aa20.5■□□□□ 0.87
SRF-201ENST00000265354 ATP10BO94823 1461 aa20.5■□□□□ 0.87
SRF-201ENST00000265354 SRGAP3O43295 1099 aa20.49■□□□□ 0.87
SRF-201ENST00000265354 JAKMIP1Q96N16 626 aaKnown RBP20.49■□□□□ 0.87
SRF-201ENST00000265354 SIL1Q9H173 461 aa20.49■□□□□ 0.87
SRF-201ENST00000265354 TFIP11Q9UBB9 837 aaKnown RBP20.49■□□□□ 0.87
SRF-201ENST00000265354 RBM25P49756 843 aaKnown RBP20.49■□□□□ 0.87
SRF-201ENST00000265354 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
SRF-201ENST00000265354 LRSAM1Q6UWE0 723 aa20.49■□□□□ 0.87
SRF-201ENST00000265354 C16orf45Q96MC5 204 aaPredicted RBP20.48■□□□□ 0.87
SRF-201ENST00000265354 VAMP4O75379 141 aa20.48■□□□□ 0.87
SRF-201ENST00000265354 MX1P20591 662 aa20.48■□□□□ 0.87
SRF-201ENST00000265354 CASTP20810 708 aaKnown RBP20.48■□□□□ 0.87
SRF-201ENST00000265354 PLEKHM2Q8IWE5 1019 aa20.48■□□□□ 0.87
SRF-201ENST00000265354 BCORL1Q5H9F3 1711 aa20.48■□□□□ 0.87
SRF-201ENST00000265354 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
SRF-201ENST00000265354 ZBTB7BO15156 539 aaPredicted RBP20.48■□□□□ 0.87
SRF-201ENST00000265354 CLASRPQ8N2M8 674 aaKnown RBP20.48■□□□□ 0.87
SRF-201ENST00000265354 TRIM35Q9UPQ4 493 aa20.47■□□□□ 0.87
SRF-201ENST00000265354 PIK3C2GO75747 1445 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms