RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.32
LSG1-201ENST00000265245 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
LSG1-201ENST00000265245 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
LSG1-201ENST00000265245 IL13P35225 146 aa13.07□□□□□ -0.32
LSG1-201ENST00000265245 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
LSG1-201ENST00000265245 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
LSG1-201ENST00000265245 PHACTR3Q96KR7 559 aa13.07□□□□□ -0.32
LSG1-201ENST00000265245 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
LSG1-201ENST00000265245 USP19O94966 1318 aa13.07□□□□□ -0.32
LSG1-201ENST00000265245 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
LSG1-201ENST00000265245 GNAI1P63096 354 aa13.06□□□□□ -0.32
LSG1-201ENST00000265245 BECN1Q14457 450 aa13.06□□□□□ -0.32
LSG1-201ENST00000265245 SEC24BO95487 1268 aa13.06□□□□□ -0.32
LSG1-201ENST00000265245 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
LSG1-201ENST00000265245 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
LSG1-201ENST00000265245 NCKAP5LQ9HCH0 1330 aa13.05□□□□□ -0.32
LSG1-201ENST00000265245 RRS1Q15050 365 aaKnown RBP13.04□□□□□ -0.32
LSG1-201ENST00000265245 NFKBIBQ15653 356 aa13.04□□□□□ -0.32
LSG1-201ENST00000265245 ZBTB40Q9NUA8 1239 aa13.04□□□□□ -0.32
LSG1-201ENST00000265245 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
LSG1-201ENST00000265245 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
LSG1-201ENST00000265245 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
LSG1-201ENST00000265245 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
LSG1-201ENST00000265245 CPS1P31327 1500 aa13.03□□□□□ -0.32
LSG1-201ENST00000265245 SMC5Q8IY18 1101 aa13.02□□□□□ -0.32
LSG1-201ENST00000265245 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
LSG1-201ENST00000265245 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
LSG1-201ENST00000265245 SLIT1O75093 1534 aa13.02□□□□□ -0.33
LSG1-201ENST00000265245 SETD1BQ9UPS6 1966 aaKnown RBP13.02□□□□□ -0.33
LSG1-201ENST00000265245 VAMP4O75379 141 aa13.01□□□□□ -0.33
LSG1-201ENST00000265245 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
LSG1-201ENST00000265245 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
LSG1-201ENST00000265245 VIRMAQ69YN4 1812 aaKnown RBP13.01□□□□□ -0.33
LSG1-201ENST00000265245 KNDC1Q76NI1 1749 aa13.01□□□□□ -0.33
LSG1-201ENST00000265245 ARHGAP23Q9P227 1491 aa13.01□□□□□ -0.33
LSG1-201ENST00000265245 CEP170BQ9Y4F5 1589 aaPredicted RBP13.01□□□□□ -0.33
LSG1-201ENST00000265245 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
LSG1-201ENST00000265245 MBIPQ9NS73 344 aa13.01□□□□□ -0.33
LSG1-201ENST00000265245 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
LSG1-201ENST00000265245 ZNF853P0CG23 659 aa13□□□□□ -0.33
LSG1-201ENST00000265245 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
LSG1-201ENST00000265245 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
LSG1-201ENST00000265245 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
LSG1-201ENST00000265245 PLEKHG1Q9ULL1 1385 aa12.99□□□□□ -0.33
LSG1-201ENST00000265245 TTC21BQ7Z4L5 1316 aa12.99□□□□□ -0.33
LSG1-201ENST00000265245 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
LSG1-201ENST00000265245 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
LSG1-201ENST00000265245 TSPYL6Q8N831 410 aa12.99□□□□□ -0.33
LSG1-201ENST00000265245 ACEP12821 1306 aa12.99□□□□□ -0.33
LSG1-201ENST00000265245 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
LSG1-201ENST00000265245 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
LSG1-201ENST00000265245 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
LSG1-201ENST00000265245 LTKP29376 864 aa12.97□□□□□ -0.33
LSG1-201ENST00000265245 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
LSG1-201ENST00000265245 NUCB1Q02818 461 aa12.97□□□□□ -0.33
LSG1-201ENST00000265245 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
LSG1-201ENST00000265245 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
LSG1-201ENST00000265245 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
LSG1-201ENST00000265245 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
LSG1-201ENST00000265245 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
LSG1-201ENST00000265245 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
LSG1-201ENST00000265245 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
LSG1-201ENST00000265245 FAM83GA6ND36 823 aa12.96□□□□□ -0.33
LSG1-201ENST00000265245 ZBTB7BO15156 539 aaPredicted RBP12.96□□□□□ -0.33
LSG1-201ENST00000265245 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
LSG1-201ENST00000265245 CHD1LQ86WJ1 897 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 C8orf58Q8NAV2 365 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 GSE1Q14687 1217 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 USP6P35125 1406 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 ABCC4O15439 1325 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
LSG1-201ENST00000265245 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
LSG1-201ENST00000265245 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
LSG1-201ENST00000265245 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
LSG1-201ENST00000265245 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
LSG1-201ENST00000265245 CEBPAP49715 358 aaPredicted RBP12.94□□□□□ -0.34
LSG1-201ENST00000265245 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
LSG1-201ENST00000265245 TBC1D2Q9BYX2 928 aa12.93□□□□□ -0.34
LSG1-201ENST00000265245 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
LSG1-201ENST00000265245 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
LSG1-201ENST00000265245 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
LSG1-201ENST00000265245 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
LSG1-201ENST00000265245 SOX12O15370 315 aa12.92□□□□□ -0.34
LSG1-201ENST00000265245 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
LSG1-201ENST00000265245 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
LSG1-201ENST00000265245 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
LSG1-201ENST00000265245 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
LSG1-201ENST00000265245 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
LSG1-201ENST00000265245 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
LSG1-201ENST00000265245 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
LSG1-201ENST00000265245 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
LSG1-201ENST00000265245 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
LSG1-201ENST00000265245 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
LSG1-201ENST00000265245 KIF24Q5T7B8 1368 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms