RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 CDK12Q9NYV4 1490 aaPredicted RBP13.59□□□□□ -0.23
GTF3C2-201ENST00000264720 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
GTF3C2-201ENST00000264720 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
GTF3C2-201ENST00000264720 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
GTF3C2-201ENST00000264720 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
GTF3C2-201ENST00000264720 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
GTF3C2-201ENST00000264720 BCL11BQ9C0K0 894 aaPredicted RBP13.58□□□□□ -0.24
GTF3C2-201ENST00000264720 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
GTF3C2-201ENST00000264720 OVOS2A0A0J9YW53 1432 aa13.58□□□□□ -0.24
GTF3C2-201ENST00000264720 OVOS2Q6IE36 1432 aa13.58□□□□□ -0.24
GTF3C2-201ENST00000264720 EMILIN1Q9Y6C2 1016 aa13.58□□□□□ -0.24
GTF3C2-201ENST00000264720 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
GTF3C2-201ENST00000264720 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
GTF3C2-201ENST00000264720 PLIN1O60240 522 aa13.57□□□□□ -0.24
GTF3C2-201ENST00000264720 AAMPQ13685 434 aa13.57□□□□□ -0.24
GTF3C2-201ENST00000264720 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
GTF3C2-201ENST00000264720 E9PSI1 815 aa13.57□□□□□ -0.24
GTF3C2-201ENST00000264720 FCHSD2O94868 740 aa13.57□□□□□ -0.24
GTF3C2-201ENST00000264720 PSME1Q06323 249 aa13.57□□□□□ -0.24
GTF3C2-201ENST00000264720 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
GTF3C2-201ENST00000264720 ATF3P18847 181 aa13.56□□□□□ -0.24
GTF3C2-201ENST00000264720 NLRP6P59044 892 aa13.56□□□□□ -0.24
GTF3C2-201ENST00000264720 RRS1Q15050 365 aaKnown RBP13.56□□□□□ -0.24
GTF3C2-201ENST00000264720 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
GTF3C2-201ENST00000264720 FBLN1P23142 703 aa13.56□□□□□ -0.24
GTF3C2-201ENST00000264720 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
GTF3C2-201ENST00000264720 ABTB2Q8N961 1025 aa13.55□□□□□ -0.24
GTF3C2-201ENST00000264720 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
GTF3C2-201ENST00000264720 SLFN5Q08AF3 891 aa13.55□□□□□ -0.24
GTF3C2-201ENST00000264720 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
GTF3C2-201ENST00000264720 FGD1P98174 961 aa13.54□□□□□ -0.24
GTF3C2-201ENST00000264720 WDR63Q8IWG1 891 aa13.54□□□□□ -0.24
GTF3C2-201ENST00000264720 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 IQSEC2Q5JU85 1478 aa13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 TMEM94Q12767 1356 aa13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 ZHX1Q9UKY1 873 aaPredicted RBP13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 SOX12O15370 315 aa13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 IL13P35225 146 aa13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 TRIM44Q96DX7 344 aaPredicted RBP13.53□□□□□ -0.24
GTF3C2-201ENST00000264720 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.24
GTF3C2-201ENST00000264720 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.24
GTF3C2-201ENST00000264720 DCCP43146 1447 aa13.52□□□□□ -0.24
GTF3C2-201ENST00000264720 AMPHP49418 695 aa13.52□□□□□ -0.25
GTF3C2-201ENST00000264720 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.25
GTF3C2-201ENST00000264720 PLEKHF1Q96S99 279 aa13.51□□□□□ -0.25
GTF3C2-201ENST00000264720 TMPOP42166 694 aaKnown RBP13.51□□□□□ -0.25
GTF3C2-201ENST00000264720 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
GTF3C2-201ENST00000264720 MSH6P52701 1360 aa13.51□□□□□ -0.25
GTF3C2-201ENST00000264720 PIK3C2AO00443 1686 aa13.51□□□□□ -0.25
GTF3C2-201ENST00000264720 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
GTF3C2-201ENST00000264720 KIF1AQ12756 1690 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 FLT4P35916 1363 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 GOLGA6L3A6NEY3 463 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 TRMT2AQ8IZ69 625 aaKnown RBP13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 ORAI2Q96SN7 254 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 C1orf167Q5SNV9 1468 aa13.5□□□□□ -0.25
GTF3C2-201ENST00000264720 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 HMOX1P09601 288 aa13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 NUTM2GQ5VZR2 741 aa13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 FOXO3O43524 673 aa13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 RIPK4P57078 832 aa13.49□□□□□ -0.25
GTF3C2-201ENST00000264720 KCNH5Q8NCM2 988 aa13.48□□□□□ -0.25
GTF3C2-201ENST00000264720 USP54Q70EL1 1684 aa13.48□□□□□ -0.25
GTF3C2-201ENST00000264720 EIF4A2Q14240 407 aaKnown RBP13.48□□□□□ -0.25
GTF3C2-201ENST00000264720 STRCQ7RTU9 1775 aa13.48□□□□□ -0.25
GTF3C2-201ENST00000264720 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
GTF3C2-201ENST00000264720 CALD1Q05682 793 aaKnown RBP13.47□□□□□ -0.25
GTF3C2-201ENST00000264720 LMOD3Q0VAK6 560 aa13.47□□□□□ -0.25
GTF3C2-201ENST00000264720 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
GTF3C2-201ENST00000264720 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
GTF3C2-201ENST00000264720 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
GTF3C2-201ENST00000264720 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
GTF3C2-201ENST00000264720 BBXQ8WY36 941 aaPredicted RBP13.46□□□□□ -0.26
GTF3C2-201ENST00000264720 IL16Q14005 1332 aa13.46□□□□□ -0.26
GTF3C2-201ENST00000264720 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
GTF3C2-201ENST00000264720 MST1RQ04912 1400 aa13.45□□□□□ -0.26
GTF3C2-201ENST00000264720 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
GTF3C2-201ENST00000264720 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
GTF3C2-201ENST00000264720 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
GTF3C2-201ENST00000264720 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
GTF3C2-201ENST00000264720 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
GTF3C2-201ENST00000264720 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
GTF3C2-201ENST00000264720 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
GTF3C2-201ENST00000264720 XPCQ01831 940 aaPredicted RBP13.43□□□□□ -0.26
GTF3C2-201ENST00000264720 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
GTF3C2-201ENST00000264720 HOXC9P31274 260 aa13.42□□□□□ -0.26
GTF3C2-201ENST00000264720 MS4A1P11836 297 aa13.42□□□□□ -0.26
GTF3C2-201ENST00000264720 XRCC6P12956 609 aaKnown RBP eCLIP13.42□□□□□ -0.265e-8■■■■□ 23.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms