RNA–Protein interactions for RNA: ENST00000264027.8

SC5D-201, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-201ENST00000264027 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
SC5D-201ENST00000264027 AAMPQ13685 434 aa18.78■□□□□ 0.6
SC5D-201ENST00000264027 PHRF1Q9P1Y6 1649 aaKnown RBP18.77■□□□□ 0.6
SC5D-201ENST00000264027 PHACTR3Q96KR7 559 aa18.77■□□□□ 0.6
SC5D-201ENST00000264027 NCOA3Q9Y6Q9 1424 aa18.77■□□□□ 0.6
SC5D-201ENST00000264027 RTL1A6NKG5 1358 aa18.77■□□□□ 0.6
SC5D-201ENST00000264027 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
SC5D-201ENST00000264027 LTN1O94822 1766 aa18.76■□□□□ 0.59
SC5D-201ENST00000264027 NLRP6P59044 892 aa18.75■□□□□ 0.59
SC5D-201ENST00000264027 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
SC5D-201ENST00000264027 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
SC5D-201ENST00000264027 MS4A1P11836 297 aa18.74■□□□□ 0.59
SC5D-201ENST00000264027 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
SC5D-201ENST00000264027 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
SC5D-201ENST00000264027 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
SC5D-201ENST00000264027 TRPM3Q9HCF6 1732 aaPredicted RBP18.73■□□□□ 0.59
SC5D-201ENST00000264027 DCCP43146 1447 aa18.73■□□□□ 0.59
SC5D-201ENST00000264027 NFAT5O94916 1531 aa18.73■□□□□ 0.59
SC5D-201ENST00000264027 GNAI1P63096 354 aa18.73■□□□□ 0.59
SC5D-201ENST00000264027 HSP90AB2PQ58FF8 381 aa18.73■□□□□ 0.59
SC5D-201ENST00000264027 CENPQQ7L2Z9 268 aaPredicted RBP18.73■□□□□ 0.59
SC5D-201ENST00000264027 KDRP35968 1356 aa18.73■□□□□ 0.59
SC5D-201ENST00000264027 KDM2BQ8NHM5 1336 aa18.73■□□□□ 0.59
SC5D-201ENST00000264027 SULT6B1Q6IMI4 303 aa18.72■□□□□ 0.59
SC5D-201ENST00000264027 ABTB2Q8N961 1025 aa18.72■□□□□ 0.59
SC5D-201ENST00000264027 STRCP1A6NGW2 1772 aa18.72■□□□□ 0.59
SC5D-201ENST00000264027 AMPHP49418 695 aa18.72■□□□□ 0.59
SC5D-201ENST00000264027 ZNF853P0CG23 659 aa18.71■□□□□ 0.59
SC5D-201ENST00000264027 ALDH1L2Q3SY69 923 aa18.71■□□□□ 0.59
SC5D-201ENST00000264027 C14orf37Q86TY3 774 aa18.71■□□□□ 0.59
SC5D-201ENST00000264027 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
SC5D-201ENST00000264027 TCERG1O14776 1098 aaKnown RBP18.71■□□□□ 0.58
SC5D-201ENST00000264027 PROSER2Q86WR7 435 aaPredicted RBP18.71■□□□□ 0.58
SC5D-201ENST00000264027 SLIT3O75094 1523 aa18.7■□□□□ 0.58
SC5D-201ENST00000264027 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
SC5D-201ENST00000264027 MST1RQ04912 1400 aa18.69■□□□□ 0.58
SC5D-201ENST00000264027 ZKSCAN2Q63HK3 967 aa18.69■□□□□ 0.58
SC5D-201ENST00000264027 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
SC5D-201ENST00000264027 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
SC5D-201ENST00000264027 BRPF1P55201 1214 aaPredicted RBP18.68■□□□□ 0.58
SC5D-201ENST00000264027 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
SC5D-201ENST00000264027 HOXC9P31274 260 aa18.68■□□□□ 0.58
SC5D-201ENST00000264027 PSME1Q06323 249 aa18.68■□□□□ 0.58
SC5D-201ENST00000264027 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
SC5D-201ENST00000264027 CFAP44Q96MT7 982 aa18.68■□□□□ 0.58
SC5D-201ENST00000264027 C19orf44Q9H6X5 657 aa18.68■□□□□ 0.58
SC5D-201ENST00000264027 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
SC5D-201ENST00000264027 KCNH5Q8NCM2 988 aa18.67■□□□□ 0.58
SC5D-201ENST00000264027 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
SC5D-201ENST00000264027 SOX12O15370 315 aa18.67■□□□□ 0.58
SC5D-201ENST00000264027 RBM33Q96EV2 1170 aaKnown RBP18.66■□□□□ 0.58
SC5D-201ENST00000264027 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
SC5D-201ENST00000264027 CLUAP1Q96AJ1 413 aa18.66■□□□□ 0.58
SC5D-201ENST00000264027 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
SC5D-201ENST00000264027 LRRC37A3O60309 1634 aa18.65■□□□□ 0.58
SC5D-201ENST00000264027 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
SC5D-201ENST00000264027 BCL2L13Q9BXK5 485 aa18.64■□□□□ 0.58
SC5D-201ENST00000264027 COG6Q9Y2V7 657 aa18.64■□□□□ 0.58
SC5D-201ENST00000264027 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.57
SC5D-201ENST00000264027 EYA1Q99502 592 aa18.64■□□□□ 0.57
SC5D-201ENST00000264027 DZIP1LQ8IYY4 767 aaKnown RBP18.63■□□□□ 0.57
SC5D-201ENST00000264027 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
SC5D-201ENST00000264027 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
SC5D-201ENST00000264027 MVPQ14764 893 aaKnown RBP18.62■□□□□ 0.57
SC5D-201ENST00000264027 LAS1LQ9Y4W2 734 aaKnown RBP18.62■□□□□ 0.57
SC5D-201ENST00000264027 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SC5D-201ENST00000264027 NUTM2GQ5VZR2 741 aa18.62■□□□□ 0.57
SC5D-201ENST00000264027 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
SC5D-201ENST00000264027 IP6K1Q92551 441 aa18.62■□□□□ 0.57
SC5D-201ENST00000264027 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
SC5D-201ENST00000264027 TMEM94Q12767 1356 aa18.62■□□□□ 0.57
SC5D-201ENST00000264027 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
SC5D-201ENST00000264027 HTATSF1O43719 755 aaKnown RBP18.61■□□□□ 0.57
SC5D-201ENST00000264027 FTSJ3Q8IY81 847 aaKnown RBP18.61■□□□□ 0.57
SC5D-201ENST00000264027 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
SC5D-201ENST00000264027 LMTK3Q96Q04 1460 aa18.61■□□□□ 0.57
SC5D-201ENST00000264027 USP19O94966 1318 aa18.61■□□□□ 0.57
SC5D-201ENST00000264027 RLBP1P12271 317 aa18.61■□□□□ 0.57
SC5D-201ENST00000264027 XIRP1Q702N8 1843 aaKnown RBP18.6■□□□□ 0.57
SC5D-201ENST00000264027 VAMP4O75379 141 aa18.6■□□□□ 0.57
SC5D-201ENST00000264027 CAMTA1Q9Y6Y1 1673 aa18.6■□□□□ 0.57
SC5D-201ENST00000264027 CRB1P82279 1406 aa18.6■□□□□ 0.57
SC5D-201ENST00000264027 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
SC5D-201ENST00000264027 ARHGAP45Q92619 1136 aa18.59■□□□□ 0.57
SC5D-201ENST00000264027 FAM83GA6ND36 823 aa18.59■□□□□ 0.57
SC5D-201ENST00000264027 ATF3P18847 181 aa18.59■□□□□ 0.57
SC5D-201ENST00000264027 TRIM27P14373 513 aa18.58■□□□□ 0.57
SC5D-201ENST00000264027 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.57
SC5D-201ENST00000264027 CHL1O00533 1208 aa18.58■□□□□ 0.56
SC5D-201ENST00000264027 DDX19BQ9UMR2 479 aa18.58■□□□□ 0.56
SC5D-201ENST00000264027 MTHFSDQ2M296 383 aaKnown RBP18.57■□□□□ 0.56
SC5D-201ENST00000264027 TWISTNBQ3B726 338 aaPredicted RBP18.57■□□□□ 0.56
SC5D-201ENST00000264027 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
SC5D-201ENST00000264027 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
SC5D-201ENST00000264027 FOXO3O43524 673 aa18.57■□□□□ 0.56
SC5D-201ENST00000264027 NCAPD2Q15021 1401 aa18.56■□□□□ 0.56
SC5D-201ENST00000264027 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
SC5D-201ENST00000264027 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
SC5D-201ENST00000264027 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
SC5D-201ENST00000264027 CADPS2Q86UW7 1296 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms