RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 PLIN1O60240 522 aa20.44■□□□□ 0.86
FOXRED1-201ENST00000263578 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
FOXRED1-201ENST00000263578 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
FOXRED1-201ENST00000263578 KIF24Q5T7B8 1368 aa20.44■□□□□ 0.86
FOXRED1-201ENST00000263578 NUTM2GQ5VZR2 741 aa20.43■□□□□ 0.86
FOXRED1-201ENST00000263578 ORAI2Q96SN7 254 aa20.43■□□□□ 0.86
FOXRED1-201ENST00000263578 IL16Q14005 1332 aa20.43■□□□□ 0.86
FOXRED1-201ENST00000263578 DLG5Q8TDM6 1919 aa20.43■□□□□ 0.86
FOXRED1-201ENST00000263578 TRPM3Q9HCF6 1732 aaPredicted RBP20.43■□□□□ 0.86
FOXRED1-201ENST00000263578 NFE2L2Q16236 605 aa20.43■□□□□ 0.86
FOXRED1-201ENST00000263578 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.43■□□□□ 0.86
FOXRED1-201ENST00000263578 LTN1O94822 1766 aa20.42■□□□□ 0.86
FOXRED1-201ENST00000263578 PHACTR3Q96KR7 559 aa20.42■□□□□ 0.86
FOXRED1-201ENST00000263578 AMPHP49418 695 aa20.41■□□□□ 0.86
FOXRED1-201ENST00000263578 MST1RQ04912 1400 aa20.41■□□□□ 0.86
FOXRED1-201ENST00000263578 ARHGEF10O15013 1369 aa20.41■□□□□ 0.86
FOXRED1-201ENST00000263578 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
FOXRED1-201ENST00000263578 NFAT5O94916 1531 aa20.4■□□□□ 0.86
FOXRED1-201ENST00000263578 XIRP1Q702N8 1843 aaKnown RBP20.39■□□□□ 0.86
FOXRED1-201ENST00000263578 ATF3P18847 181 aa20.39■□□□□ 0.86
FOXRED1-201ENST00000263578 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
FOXRED1-201ENST00000263578 RTL1A6NKG5 1358 aa20.38■□□□□ 0.85
FOXRED1-201ENST00000263578 FOXO3O43524 673 aa20.38■□□□□ 0.85
FOXRED1-201ENST00000263578 SULT6B1Q6IMI4 303 aa20.38■□□□□ 0.85
FOXRED1-201ENST00000263578 CCDC136Q96JN2 1154 aa20.38■□□□□ 0.85
FOXRED1-201ENST00000263578 AEBP1Q8IUX7 1158 aa20.37■□□□□ 0.85
FOXRED1-201ENST00000263578 PHRF1Q9P1Y6 1649 aaKnown RBP20.36■□□□□ 0.85
FOXRED1-201ENST00000263578 BCAR3O75815 825 aa20.36■□□□□ 0.85
FOXRED1-201ENST00000263578 HOXC9P31274 260 aa20.35■□□□□ 0.85
FOXRED1-201ENST00000263578 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
FOXRED1-201ENST00000263578 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
FOXRED1-201ENST00000263578 CRBNQ96SW2 442 aa20.35■□□□□ 0.85
FOXRED1-201ENST00000263578 SLIT3O75094 1523 aa20.35■□□□□ 0.85
FOXRED1-201ENST00000263578 MSH6P52701 1360 aa20.35■□□□□ 0.85
FOXRED1-201ENST00000263578 C20orf194Q5TEA3 1177 aa20.35■□□□□ 0.85
FOXRED1-201ENST00000263578 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 CALD1Q05682 793 aaKnown RBP20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 CADPS2Q86UW7 1296 aa20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 RARSP54136 660 aaKnown RBP20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 KCNH5Q8NCM2 988 aa20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 KDRP35968 1356 aa20.34■□□□□ 0.85
FOXRED1-201ENST00000263578 KRT28Q7Z3Y7 464 aa20.32■□□□□ 0.84
FOXRED1-201ENST00000263578 EYA1Q99502 592 aa20.3■□□□□ 0.84
FOXRED1-201ENST00000263578 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
FOXRED1-201ENST00000263578 USP19O94966 1318 aa20.29■□□□□ 0.84
FOXRED1-201ENST00000263578 CANXP27824 592 aaKnown RBP20.28■□□□□ 0.84
FOXRED1-201ENST00000263578 THUMPD2Q9BTF0 503 aaKnown RBP20.28■□□□□ 0.84
FOXRED1-201ENST00000263578 IFT57Q9NWB7 429 aa20.28■□□□□ 0.84
FOXRED1-201ENST00000263578 IP6K1Q92551 441 aa20.28■□□□□ 0.84
FOXRED1-201ENST00000263578 GNAI1P63096 354 aa20.27■□□□□ 0.84
FOXRED1-201ENST00000263578 LMOD2Q6P5Q4 547 aa20.27■□□□□ 0.84
FOXRED1-201ENST00000263578 ZNF335Q9H4Z2 1342 aaPredicted RBP20.27■□□□□ 0.84
FOXRED1-201ENST00000263578 PDE3AQ14432 1141 aa20.26■□□□□ 0.83
FOXRED1-201ENST00000263578 GCP02774 474 aa20.26■□□□□ 0.83
FOXRED1-201ENST00000263578 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
FOXRED1-201ENST00000263578 NPHP3Q7Z494 1330 aa20.26■□□□□ 0.83
FOXRED1-201ENST00000263578 ZNF853P0CG23 659 aa20.25■□□□□ 0.83
FOXRED1-201ENST00000263578 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
FOXRED1-201ENST00000263578 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
FOXRED1-201ENST00000263578 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
FOXRED1-201ENST00000263578 LTV1Q96GA3 475 aaPredicted RBP20.24■□□□□ 0.83
FOXRED1-201ENST00000263578 MED1Q15648 1581 aaPredicted RBP20.24■□□□□ 0.83
FOXRED1-201ENST00000263578 TSHZ2Q9NRE2 1034 aa20.23■□□□□ 0.83
FOXRED1-201ENST00000263578 PXDNQ92626 1479 aa20.23■□□□□ 0.83
FOXRED1-201ENST00000263578 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
FOXRED1-201ENST00000263578 CFAP44Q96MT7 982 aa20.23■□□□□ 0.83
FOXRED1-201ENST00000263578 TNS3Q68CZ2 1445 aa20.22■□□□□ 0.83
FOXRED1-201ENST00000263578 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
FOXRED1-201ENST00000263578 DCTN1Q14203 1278 aa20.22■□□□□ 0.83
FOXRED1-201ENST00000263578 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
FOXRED1-201ENST00000263578 GAS2L2Q8NHY3 880 aa20.21■□□□□ 0.83
FOXRED1-201ENST00000263578 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
FOXRED1-201ENST00000263578 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
FOXRED1-201ENST00000263578 MTHFSDQ2M296 383 aaKnown RBP20.21■□□□□ 0.83
FOXRED1-201ENST00000263578 DDX17Q92841 729 aaKnown RBP20.21■□□□□ 0.83
FOXRED1-201ENST00000263578 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
FOXRED1-201ENST00000263578 ZNF428Q96B54 188 aa20.19■□□□□ 0.82
FOXRED1-201ENST00000263578 LRRC37A3O60309 1634 aa20.19■□□□□ 0.82
FOXRED1-201ENST00000263578 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
FOXRED1-201ENST00000263578 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
FOXRED1-201ENST00000263578 CAMTA1Q9Y6Y1 1673 aa20.18■□□□□ 0.82
FOXRED1-201ENST00000263578 ALDH1L2Q3SY69 923 aa20.18■□□□□ 0.82
FOXRED1-201ENST00000263578 MCM10Q7L590 875 aa20.18■□□□□ 0.82
FOXRED1-201ENST00000263578 PANK1Q8TE04 598 aa20.18■□□□□ 0.82
FOXRED1-201ENST00000263578 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
FOXRED1-201ENST00000263578 ZKSCAN2Q63HK3 967 aa20.17■□□□□ 0.82
FOXRED1-201ENST00000263578 RGPD5Q99666 1765 aa20.17■□□□□ 0.82
FOXRED1-201ENST00000263578 CRB1P82279 1406 aa20.16■□□□□ 0.82
FOXRED1-201ENST00000263578 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
FOXRED1-201ENST00000263578 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
FOXRED1-201ENST00000263578 KIF16BQ96L93 1317 aa20.16■□□□□ 0.82
FOXRED1-201ENST00000263578 COG6Q9Y2V7 657 aa20.15■□□□□ 0.82
FOXRED1-201ENST00000263578 NCAPD2Q15021 1401 aa20.15■□□□□ 0.82
FOXRED1-201ENST00000263578 SPATA31A3Q5VYP0 1347 aa20.15■□□□□ 0.82
FOXRED1-201ENST00000263578 NBPF6Q5VWK0 638 aa20.15■□□□□ 0.82
FOXRED1-201ENST00000263578 NBPF4Q96M43 638 aa20.15■□□□□ 0.82
FOXRED1-201ENST00000263578 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms