RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
TTC39A-202ENST00000262676 PTCD1O75127 700 aaKnown RBP15.29■□□□□ 0.04
TTC39A-202ENST00000262676 INCENPQ9NQS7 918 aa15.29■□□□□ 0.04
TTC39A-202ENST00000262676 SPG7Q9UQ90 795 aa15.29■□□□□ 0.04
TTC39A-202ENST00000262676 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-202ENST00000262676 DZIP1LQ8IYY4 767 aaKnown RBP15.29■□□□□ 0.04
TTC39A-202ENST00000262676 SLC52A1Q9NWF4 448 aa15.29■□□□□ 0.04
TTC39A-202ENST00000262676 CCDC85AQ96PX6 553 aaPredicted RBP15.28■□□□□ 0.04
TTC39A-202ENST00000262676 CDK5RAP3Q96JB5 506 aa15.28■□□□□ 0.04
TTC39A-202ENST00000262676 UQCRHLA0A096LP55 91 aa15.28■□□□□ 0.04
TTC39A-202ENST00000262676 UQCRHP07919 91 aa15.28■□□□□ 0.04
TTC39A-202ENST00000262676 SLC12A5Q9H2X9 1139 aa15.28■□□□□ 0.04
TTC39A-202ENST00000262676 XBP1P17861 261 aa15.28■□□□□ 0.04
TTC39A-202ENST00000262676 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
TTC39A-202ENST00000262676 KINO60870 393 aaKnown RBP15.27■□□□□ 0.04
TTC39A-202ENST00000262676 GIMAP7Q8NHV1 300 aa15.27■□□□□ 0.04
TTC39A-202ENST00000262676 CNNM1Q9NRU3 951 aa15.27■□□□□ 0.04
TTC39A-202ENST00000262676 MPRIPQ6WCQ1 1025 aa15.27■□□□□ 0.03
TTC39A-202ENST00000262676 RTEL1-TNFRSF6BF6WH68 1400 aa15.27■□□□□ 0.03
TTC39A-202ENST00000262676 SERPINC1P01008 464 aa15.27■□□□□ 0.03
TTC39A-202ENST00000262676 NCOA2Q15596 1464 aa15.26■□□□□ 0.03
TTC39A-202ENST00000262676 DEF6Q9H4E7 631 aa15.26■□□□□ 0.03
TTC39A-202ENST00000262676 ERC2O15083 957 aa15.26■□□□□ 0.03
TTC39A-202ENST00000262676 AMOTL2Q9Y2J4 779 aa15.26■□□□□ 0.03
TTC39A-202ENST00000262676 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.26■□□□□ 0.03
TTC39A-202ENST00000262676 FGD6Q6ZV73 1430 aa15.26■□□□□ 0.03
TTC39A-202ENST00000262676 KRT18P05783 430 aaKnown RBP15.26■□□□□ 0.03
TTC39A-202ENST00000262676 NBPF1Q3BBV0 1214 aa15.26■□□□□ 0.03
TTC39A-202ENST00000262676 USHBP1Q8N6Y0 703 aa15.26■□□□□ 0.03
TTC39A-202ENST00000262676 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
TTC39A-202ENST00000262676 TICAM2Q86XR7 235 aa15.25■□□□□ 0.03
TTC39A-202ENST00000262676 EZRP15311 586 aaKnown RBP15.25■□□□□ 0.03
TTC39A-202ENST00000262676 ZNHIT6Q9NWK9 470 aaKnown RBP15.25■□□□□ 0.03
TTC39A-202ENST00000262676 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
TTC39A-202ENST00000262676 CCDC112Q8NEF3 446 aa15.24■□□□□ 0.03
TTC39A-202ENST00000262676 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
TTC39A-202ENST00000262676 EIF3JO75822 258 aaKnown RBP15.24■□□□□ 0.03
TTC39A-202ENST00000262676 PRKAR2BP31323 418 aa15.24■□□□□ 0.03
TTC39A-202ENST00000262676 PDCL3Q9H2J4 239 aa15.24■□□□□ 0.03
TTC39A-202ENST00000262676 USP8P40818 1118 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 PPM1FP49593 454 aaPredicted RBP15.23■□□□□ 0.03
TTC39A-202ENST00000262676 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
TTC39A-202ENST00000262676 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 FIBPO43427 364 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 TTLL12Q14166 644 aaPredicted RBP15.23■□□□□ 0.03
TTC39A-202ENST00000262676 ROCK1Q13464 1354 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 TANGO6Q9C0B7 1094 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 CDC45O75419 566 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 PSMA5P28066 241 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 PPFIBP1Q86W92 1011 aa15.23■□□□□ 0.03
TTC39A-202ENST00000262676 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
TTC39A-202ENST00000262676 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
TTC39A-202ENST00000262676 ZPR1O75312 459 aa15.22■□□□□ 0.03
TTC39A-202ENST00000262676 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
TTC39A-202ENST00000262676 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
TTC39A-202ENST00000262676 GAS2L2Q8NHY3 880 aa15.22■□□□□ 0.03
TTC39A-202ENST00000262676 ERLIN1O75477 346 aa15.22■□□□□ 0.03
TTC39A-202ENST00000262676 GBP2P32456 591 aaPredicted RBP15.22■□□□□ 0.03
TTC39A-202ENST00000262676 LRRCC1Q9C099 1032 aa15.22■□□□□ 0.03
TTC39A-202ENST00000262676 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
TTC39A-202ENST00000262676 GOLGA6L10A0A0M3HER8 536 aa15.22■□□□□ 0.03
TTC39A-202ENST00000262676 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
TTC39A-202ENST00000262676 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
TTC39A-202ENST00000262676 NF2P35240 595 aa15.21■□□□□ 0.03
TTC39A-202ENST00000262676 CCDC97Q96F63 343 aaPredicted RBP15.21■□□□□ 0.03
TTC39A-202ENST00000262676 SEPT11Q9NVA2 429 aaKnown RBP15.21■□□□□ 0.03
TTC39A-202ENST00000262676 LRRFIP2Q9Y608 721 aaKnown RBP15.21■□□□□ 0.03
TTC39A-202ENST00000262676 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.03
TTC39A-202ENST00000262676 RBM25P49756 843 aaKnown RBP15.21■□□□□ 0.03
TTC39A-202ENST00000262676 FYCO1Q9BQS8 1478 aa15.21■□□□□ 0.03
TTC39A-202ENST00000262676 RABEP1Q15276 862 aa15.21■□□□□ 0.02
TTC39A-202ENST00000262676 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
TTC39A-202ENST00000262676 ZHX3Q9H4I2 956 aa15.2■□□□□ 0.02
TTC39A-202ENST00000262676 TXLNAP40222 546 aa15.2■□□□□ 0.02
TTC39A-202ENST00000262676 ZBED9Q6R2W3 1325 aa15.2■□□□□ 0.02
TTC39A-202ENST00000262676 GNAI1P63096 354 aa15.2■□□□□ 0.02
TTC39A-202ENST00000262676 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
TTC39A-202ENST00000262676 FSD1Q9BTV5 496 aa15.2■□□□□ 0.02
TTC39A-202ENST00000262676 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
TTC39A-202ENST00000262676 STK38Q15208 465 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 TMOD3Q9NYL9 352 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 CNTROBQ8N137 903 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 RUNDC1Q96C34 613 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 UBTFL1P0CB47 393 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-202ENST00000262676 MBD3O95983 291 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 SIL1Q9H173 461 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 CUX1P39880 1505 aa15.19■□□□□ 0.02
TTC39A-202ENST00000262676 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
TTC39A-202ENST00000262676 ZNF396Q96N95 335 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-202ENST00000262676 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-202ENST00000262676 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
TTC39A-202ENST00000262676 MPHOSPH8Q99549 860 aa15.18■□□□□ 0.02
TTC39A-202ENST00000262676 ADGRL1O94910 1474 aa15.18■□□□□ 0.02
TTC39A-202ENST00000262676 NCKAP5LQ9HCH0 1330 aa15.18■□□□□ 0.02
TTC39A-202ENST00000262676 STK3Q13188 491 aa15.18■□□□□ 0.02
TTC39A-202ENST00000262676 HSP90AB4PQ58FF6 505 aa15.18■□□□□ 0.02
TTC39A-202ENST00000262676 CHMP4BP1P59074 171 aa15.17■□□□□ 0.02
TTC39A-202ENST00000262676 EXOC5O00471 708 aa15.17■□□□□ 0.02
TTC39A-202ENST00000262676 GPATCH11Q8N954 259 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms