RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 CT47B1P0C2W7 299 aaPredicted RBP16.12■□□□□ 0.17
SEC23B-201ENST00000262544 ZNF428Q96B54 188 aa16.12■□□□□ 0.17
SEC23B-201ENST00000262544 NUDT16Q96DE0 195 aaKnown RBP16.12■□□□□ 0.17
SEC23B-201ENST00000262544 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
SEC23B-201ENST00000262544 F6X3S4 739 aa16.11■□□□□ 0.17
SEC23B-201ENST00000262544 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
SEC23B-201ENST00000262544 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
SEC23B-201ENST00000262544 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
SEC23B-201ENST00000262544 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
SEC23B-201ENST00000262544 FOXO3O43524 673 aa16.1■□□□□ 0.17
SEC23B-201ENST00000262544 NEO1Q92859 1461 aa16.09■□□□□ 0.17
SEC23B-201ENST00000262544 SSFA2P28290 1259 aa16.09■□□□□ 0.17
SEC23B-201ENST00000262544 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
SEC23B-201ENST00000262544 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
SEC23B-201ENST00000262544 PPLO60437 1756 aa16.08■□□□□ 0.17
SEC23B-201ENST00000262544 ALDH1L2Q3SY69 923 aa16.08■□□□□ 0.16
SEC23B-201ENST00000262544 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
SEC23B-201ENST00000262544 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
SEC23B-201ENST00000262544 IL13P35225 146 aa16.07■□□□□ 0.16
SEC23B-201ENST00000262544 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
SEC23B-201ENST00000262544 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
SEC23B-201ENST00000262544 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
SEC23B-201ENST00000262544 MEIS3Q99687 375 aa16.06■□□□□ 0.16
SEC23B-201ENST00000262544 MLH3Q9UHC1 1453 aa16.06■□□□□ 0.16
SEC23B-201ENST00000262544 SIGLEC1Q9BZZ2 1709 aa16.06■□□□□ 0.16
SEC23B-201ENST00000262544 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
SEC23B-201ENST00000262544 IL16Q14005 1332 aa16.06■□□□□ 0.16
SEC23B-201ENST00000262544 NEXMIFQ5QGS0 1516 aa16.06■□□□□ 0.16
SEC23B-201ENST00000262544 BMP2KLQ5H9B9 411 aa16.06■□□□□ 0.16
SEC23B-201ENST00000262544 HECW2Q9P2P5 1572 aa16.05■□□□□ 0.16
SEC23B-201ENST00000262544 GSPT1P15170 499 aaKnown RBP16.05■□□□□ 0.16
SEC23B-201ENST00000262544 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
SEC23B-201ENST00000262544 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
SEC23B-201ENST00000262544 TRIM44Q96DX7 344 aaPredicted RBP16.05■□□□□ 0.16
SEC23B-201ENST00000262544 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
SEC23B-201ENST00000262544 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
SEC23B-201ENST00000262544 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
SEC23B-201ENST00000262544 IFT57Q9NWB7 429 aa16.04■□□□□ 0.16
SEC23B-201ENST00000262544 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
SEC23B-201ENST00000262544 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
SEC23B-201ENST00000262544 DDX49Q9Y6V7 483 aaKnown RBP16.04■□□□□ 0.16
SEC23B-201ENST00000262544 DTNBO60941 627 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 PKP1Q13835 747 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 GRPEL1Q9HAV7 217 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 K7ELQ4 463 aaPredicted RBP16.03■□□□□ 0.16
SEC23B-201ENST00000262544 RBM33Q96EV2 1170 aaKnown RBP16.03■□□□□ 0.16
SEC23B-201ENST00000262544 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
SEC23B-201ENST00000262544 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
SEC23B-201ENST00000262544 CDC45O75419 566 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 GAS2L3Q86XJ1 694 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
SEC23B-201ENST00000262544 ZC3H13Q5T200 1668 aaKnown RBP16.03■□□□□ 0.16
SEC23B-201ENST00000262544 LMTK2Q8IWU2 1503 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
SEC23B-201ENST00000262544 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
SEC23B-201ENST00000262544 PTPRMP28827 1452 aa16.02■□□□□ 0.16
SEC23B-201ENST00000262544 EIF4A2Q14240 407 aaKnown RBP16.02■□□□□ 0.15
SEC23B-201ENST00000262544 KIF2CQ99661 725 aa16.02■□□□□ 0.15
SEC23B-201ENST00000262544 CEBPAP49715 358 aaPredicted RBP16.01■□□□□ 0.15
SEC23B-201ENST00000262544 G2E3Q7L622 706 aa16.01■□□□□ 0.15
SEC23B-201ENST00000262544 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
SEC23B-201ENST00000262544 METP08581 1390 aa16.01■□□□□ 0.15
SEC23B-201ENST00000262544 MYO5BQ9ULV0 1848 aa16.01■□□□□ 0.15
SEC23B-201ENST00000262544 PLEKHM2Q8IWE5 1019 aa16.01■□□□□ 0.15
SEC23B-201ENST00000262544 RBM25P49756 843 aaKnown RBP16.01■□□□□ 0.15
SEC23B-201ENST00000262544 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
SEC23B-201ENST00000262544 RILPL2Q969X0 211 aa16.01■□□□□ 0.15
SEC23B-201ENST00000262544 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
SEC23B-201ENST00000262544 TSPYL4Q9UJ04 414 aa16■□□□□ 0.15
SEC23B-201ENST00000262544 ABCF1Q8NE71 845 aaKnown RBP eCLIP16■□□□□ 0.15
SEC23B-201ENST00000262544 RICTORQ6R327 1708 aa16■□□□□ 0.15
SEC23B-201ENST00000262544 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
SEC23B-201ENST00000262544 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
SEC23B-201ENST00000262544 ZGPATQ8N5A5 531 aaKnown RBP15.99■□□□□ 0.15
SEC23B-201ENST00000262544 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
SEC23B-201ENST00000262544 PIK3C2BO00750 1634 aa15.99■□□□□ 0.15
SEC23B-201ENST00000262544 DIP2BQ9P265 1576 aa15.99■□□□□ 0.15
SEC23B-201ENST00000262544 MAP4K4O95819 1239 aaPredicted RBP15.99■□□□□ 0.15
SEC23B-201ENST00000262544 GOLGA6L22H0YM25 854 aa15.98■□□□□ 0.15
SEC23B-201ENST00000262544 SDSP20132 328 aa15.98■□□□□ 0.15
SEC23B-201ENST00000262544 AMPHP49418 695 aa15.98■□□□□ 0.15
SEC23B-201ENST00000262544 NGDNQ8NEJ9 315 aaKnown RBP15.98■□□□□ 0.15
SEC23B-201ENST00000262544 AK9Q5TCS8 1911 aa15.98■□□□□ 0.15
SEC23B-201ENST00000262544 CAVIN1Q6NZI2 390 aaKnown RBP15.98■□□□□ 0.15
SEC23B-201ENST00000262544 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
SEC23B-201ENST00000262544 FKBP5Q13451 457 aaPredicted RBP15.97■□□□□ 0.15
SEC23B-201ENST00000262544 FAM135BQ49AJ0 1406 aa15.97■□□□□ 0.15
SEC23B-201ENST00000262544 MRE11P49959 708 aa15.97■□□□□ 0.15
SEC23B-201ENST00000262544 ACEP12821 1306 aa15.97■□□□□ 0.15
SEC23B-201ENST00000262544 RIMS2Q9UQ26 1411 aa15.96■□□□□ 0.15
SEC23B-201ENST00000262544 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.15
SEC23B-201ENST00000262544 LARP6Q9BRS8 491 aaKnown RBP15.96■□□□□ 0.15
SEC23B-201ENST00000262544 PNPLA6Q8IY17 1366 aa15.96■□□□□ 0.15
SEC23B-201ENST00000262544 PRR36Q9H6K5 1346 aa15.96■□□□□ 0.15
SEC23B-201ENST00000262544 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
SEC23B-201ENST00000262544 MSH6P52701 1360 aa15.96■□□□□ 0.14
SEC23B-201ENST00000262544 MPNDQ8N594 471 aa15.95■□□□□ 0.14
SEC23B-201ENST00000262544 PKNOX2Q96KN3 472 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms