RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
CHRNA1-201ENST00000261007 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
CHRNA1-201ENST00000261007 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
CHRNA1-201ENST00000261007 NRKQ7Z2Y5 1582 aa13.63□□□□□ -0.23
CHRNA1-201ENST00000261007 TBC1D2Q9BYX2 928 aa13.63□□□□□ -0.23
CHRNA1-201ENST00000261007 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
CHRNA1-201ENST00000261007 MCM4P33991 863 aa13.63□□□□□ -0.23
CHRNA1-201ENST00000261007 RRP9O43818 475 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-201ENST00000261007 RIPK4P57078 832 aa13.62□□□□□ -0.23
CHRNA1-201ENST00000261007 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
CHRNA1-201ENST00000261007 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
CHRNA1-201ENST00000261007 MRE11P49959 708 aa13.62□□□□□ -0.23
CHRNA1-201ENST00000261007 LMOD3Q0VAK6 560 aa13.62□□□□□ -0.23
CHRNA1-201ENST00000261007 NME9Q86XW9 330 aa13.62□□□□□ -0.23
CHRNA1-201ENST00000261007 RIMS1Q86UR5 1692 aaKnown RBP13.61□□□□□ -0.23
CHRNA1-201ENST00000261007 PRR36Q9H6K5 1346 aa13.61□□□□□ -0.23
CHRNA1-201ENST00000261007 PTPRUQ92729 1446 aa13.6□□□□□ -0.23
CHRNA1-201ENST00000261007 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
CHRNA1-201ENST00000261007 USP6P35125 1406 aa13.6□□□□□ -0.23
CHRNA1-201ENST00000261007 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
CHRNA1-201ENST00000261007 IL13P35225 146 aa13.6□□□□□ -0.23
CHRNA1-201ENST00000261007 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
CHRNA1-201ENST00000261007 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
CHRNA1-201ENST00000261007 TTC21AQ8NDW8 1320 aa13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 XRN1Q8IZH2 1706 aaKnown RBP13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 HSP90AA1P07900 732 aaKnown RBP13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 COG6Q9Y2V7 657 aa13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 OVOS2A0A0J9YW53 1432 aa13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 OVOS2Q6IE36 1432 aa13.59□□□□□ -0.23
CHRNA1-201ENST00000261007 NALCNQ8IZF0 1738 aa13.58□□□□□ -0.23
CHRNA1-201ENST00000261007 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
CHRNA1-201ENST00000261007 ANKARQ7Z5J8 1434 aa13.58□□□□□ -0.24
CHRNA1-201ENST00000261007 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-201ENST00000261007 ALDH1L2Q3SY69 923 aa13.58□□□□□ -0.24
CHRNA1-201ENST00000261007 RWDD1Q9H446 243 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-201ENST00000261007 ACEP12821 1306 aa13.57□□□□□ -0.24
CHRNA1-201ENST00000261007 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
CHRNA1-201ENST00000261007 PANK1Q8TE04 598 aa13.57□□□□□ -0.24
CHRNA1-201ENST00000261007 EMILIN1Q9Y6C2 1016 aa13.57□□□□□ -0.24
CHRNA1-201ENST00000261007 USP31Q70CQ4 1352 aa13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 DDX11L8A8MPP1 907 aa13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 TRAK2O60296 914 aa13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 HSP90AA2PQ14568 343 aaPredicted RBP13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 MVPQ14764 893 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
CHRNA1-201ENST00000261007 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
CHRNA1-201ENST00000261007 GNAI1P63096 354 aa13.55□□□□□ -0.24
CHRNA1-201ENST00000261007 FTSJ3Q8IY81 847 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-201ENST00000261007 DZIP1LQ8IYY4 767 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-201ENST00000261007 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-201ENST00000261007 TSR2Q969E8 191 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-201ENST00000261007 IFT57Q9NWB7 429 aa13.54□□□□□ -0.24
CHRNA1-201ENST00000261007 ZNF142P52746 1687 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-201ENST00000261007 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
CHRNA1-201ENST00000261007 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
CHRNA1-201ENST00000261007 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
CHRNA1-201ENST00000261007 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-201ENST00000261007 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
CHRNA1-201ENST00000261007 DDX19BQ9UMR2 479 aa13.53□□□□□ -0.24
CHRNA1-201ENST00000261007 PTMSP20962 102 aa13.52□□□□□ -0.24
CHRNA1-201ENST00000261007 KCNA4P22459 653 aa13.52□□□□□ -0.24
CHRNA1-201ENST00000261007 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.24
CHRNA1-201ENST00000261007 C22orf23Q9BZE7 217 aa13.52□□□□□ -0.24
CHRNA1-201ENST00000261007 ESPNB1AK53 854 aa13.52□□□□□ -0.25
CHRNA1-201ENST00000261007 HMOX1P09601 288 aa13.52□□□□□ -0.25
CHRNA1-201ENST00000261007 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-201ENST00000261007 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.25
CHRNA1-201ENST00000261007 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
CHRNA1-201ENST00000261007 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.25
CHRNA1-201ENST00000261007 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-201ENST00000261007 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
CHRNA1-201ENST00000261007 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
CHRNA1-201ENST00000261007 TPM2P07951 284 aa13.51□□□□□ -0.25
CHRNA1-201ENST00000261007 RLBP1P12271 317 aa13.51□□□□□ -0.25
CHRNA1-201ENST00000261007 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
CHRNA1-201ENST00000261007 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
CHRNA1-201ENST00000261007 FBLN1P23142 703 aa13.5□□□□□ -0.25
CHRNA1-201ENST00000261007 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
CHRNA1-201ENST00000261007 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
CHRNA1-201ENST00000261007 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
CHRNA1-201ENST00000261007 RGPD1P0DJD0 1748 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 ARHGEF10O15013 1369 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 DDIT3P35638 169 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 NGDNQ8NEJ9 315 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 DLG5Q8TDM6 1919 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 SBNO1A3KN83 1393 aa13.49□□□□□ -0.25
CHRNA1-201ENST00000261007 TRIM27P14373 513 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms