RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 PIP4K2AP48426 406 aaPredicted RBP4.83□□□□□ -1.64
RNF38-201ENST00000259605 ZC3H6P61129 1189 aaKnown RBP4.83□□□□□ -1.64
RNF38-201ENST00000259605 CCDC174Q6PII3 467 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 AMOTQ4VCS5 1084 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 DZIP1Q86YF9 867 aaKnown RBP4.83□□□□□ -1.64
RNF38-201ENST00000259605 NYXQ9GZU5 481 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 PHF8Q9UPP1 1060 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 MTMR7Q9Y216 660 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 LRRFIP2Q9Y608 721 aaKnown RBP4.83□□□□□ -1.64
RNF38-201ENST00000259605 FYCO1Q9BQS8 1478 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 CD109Q6YHK3 1445 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 PRC1O43663 620 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 POLR3DP05423 398 aaPredicted RBP4.83□□□□□ -1.64
RNF38-201ENST00000259605 RGS3P49796 1198 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 HSP90AB2PQ58FF8 381 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 EP400NLQ6ZTU2 488 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 FAM200AQ8TCP9 573 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 RRBP1Q9P2E9 1410 aaKnown RBP4.82□□□□□ -1.64
RNF38-201ENST00000259605 GNAI3P08754 354 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 CDK19Q9BWU1 502 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 NBPF3Q9H094 633 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 ZNF408Q9H9D4 720 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNF38-201ENST00000259605 CEP126Q9P2H0 1117 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 SSX2IPQ9Y2D8 614 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 RTCBQ9Y3I0 505 aaKnown RBP4.82□□□□□ -1.64
RNF38-201ENST00000259605 BAG3O95817 575 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 USP5P45974 858 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 GSTO1P78417 241 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 PABPC4Q13310 644 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNF38-201ENST00000259605 MTIF3Q9H2K0 278 aaKnown RBP4.82□□□□□ -1.64
RNF38-201ENST00000259605 MYO15BQ96JP2 1530 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 FAM135AQ9P2D6 1515 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 PHF14O94880 888 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 UBTFL1P0CB47 393 aaPredicted RBP4.82□□□□□ -1.64
RNF38-201ENST00000259605 NBPF6Q5VWK0 638 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 NBPF5PQ86XG9 351 aaPredicted RBP4.82□□□□□ -1.64
RNF38-201ENST00000259605 NBPF4Q96M43 638 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 GBP4Q96PP9 640 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 ZNHIT6Q9NWK9 470 aaKnown RBP4.82□□□□□ -1.64
RNF38-201ENST00000259605 ARHGAP5Q13017 1502 aa4.82□□□□□ -1.64
RNF38-201ENST00000259605 CCDC7Q96M83 1385 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 H7C1D1 291 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 CETN2P41208 172 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 KRT28Q7Z3Y7 464 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 CLASRPQ8N2M8 674 aaKnown RBP4.81□□□□□ -1.64
RNF38-201ENST00000259605 ZGPATQ8N5A5 531 aaKnown RBP4.81□□□□□ -1.64
RNF38-201ENST00000259605 LRP2BPQ9P2M1 347 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 TRPC5Q9UL62 973 aaPredicted RBP4.81□□□□□ -1.64
RNF38-201ENST00000259605 PPP1R12BO60237 982 aaPredicted RBP4.81□□□□□ -1.64
RNF38-201ENST00000259605 MIER1Q8N108 512 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 RILPL2Q969X0 211 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 SETDB2Q96T68 719 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 TMEM106CQ9BVX2 250 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 SH2D4AQ9H788 454 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 RAPGEF3O95398 923 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 MCTP1Q6DN14 999 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 AKAP2Q9Y2D5 859 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 RTEL1-TNFRSF6BF6WH68 1400 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 TXLNBQ8N3L3 684 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 SPATA32Q96LK8 384 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 FERMT1Q9BQL6 677 aa4.81□□□□□ -1.64
RNF38-201ENST00000259605 TSPYL2Q9H2G4 693 aaPredicted RBP4.81□□□□□ -1.64
RNF38-201ENST00000259605 LUC7LQ9NQ29 371 aaKnown RBP4.81□□□□□ -1.64
RNF38-201ENST00000259605 SEC63Q9UGP8 760 aaKnown RBP4.81□□□□□ -1.64
RNF38-201ENST00000259605 ANKRD30BQ9BXX2 1392 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 APBA3O96018 575 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 PDE3AQ14432 1141 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 EAPPQ56P03 285 aaPredicted RBP4.8□□□□□ -1.64
RNF38-201ENST00000259605 ZBTB33Q86T24 672 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 ZC3H12CQ9C0D7 883 aaKnown RBP4.8□□□□□ -1.64
RNF38-201ENST00000259605 NINLQ9Y2I6 1382 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 UHRF1BP1Q6BDS2 1440 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 GJA3Q9Y6H8 435 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 TTC21AQ8NDW8 1320 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 MYOM3Q5VTT5 1437 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 PLB1Q6P1J6 1458 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 REC8O95072 547 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 NFE2L2Q16236 605 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 PIBF1Q8WXW3 757 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 LRRCC1Q9C099 1032 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 TMOD4Q9NZQ9 345 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 NOL7Q9UMY1 257 aaKnown RBP4.8□□□□□ -1.64
RNF38-201ENST00000259605 EPB41L2O43491 1005 aaKnown RBP4.8□□□□□ -1.64
RNF38-201ENST00000259605 MPRIPQ6WCQ1 1025 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 RGS22Q8NE09 1264 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 MKNK2Q9HBH9 465 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 PICK1Q9NRD5 415 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 USP21Q9UK80 565 aa4.8□□□□□ -1.64
RNF38-201ENST00000259605 H0YIN7 160 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 GRIN3BO60391 1043 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 PSMA5P28066 241 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 TPTE2Q6XPS3 522 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 NLRP3Q96P20 1036 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 CABP1Q9NZU7 370 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 ATAD2BQ9ULI0 1458 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 PALM3A6NDB9 673 aaPredicted RBP4.79□□□□□ -1.64
RNF38-201ENST00000259605 ARHGAP27Q6ZUM4 889 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms