RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 LMTK3Q96Q04 1460 aa9.47□□□□□ -0.89
USPL1-201ENST00000255304 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
USPL1-201ENST00000255304 PSME1Q06323 249 aa9.47□□□□□ -0.89
USPL1-201ENST00000255304 AIMP1Q12904 312 aaKnown RBP9.47□□□□□ -0.89
USPL1-201ENST00000255304 TULP4Q9NRJ4 1543 aa9.47□□□□□ -0.89
USPL1-201ENST00000255304 ZNF142P52746 1687 aaPredicted RBP9.47□□□□□ -0.89
USPL1-201ENST00000255304 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.89
USPL1-201ENST00000255304 TNRQ92752 1358 aa9.46□□□□□ -0.89
USPL1-201ENST00000255304 SEC24BO95487 1268 aa9.46□□□□□ -0.9
USPL1-201ENST00000255304 EMILIN1Q9Y6C2 1016 aa9.46□□□□□ -0.9
USPL1-201ENST00000255304 GOLGA6L22H0YM25 854 aa9.46□□□□□ -0.9
USPL1-201ENST00000255304 NME9Q86XW9 330 aa9.46□□□□□ -0.9
USPL1-201ENST00000255304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.45□□□□□ -0.9
USPL1-201ENST00000255304 TNNQ9UQP3 1299 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 ABTB2Q8N961 1025 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 GPRASP1Q5JY77 1395 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 MYOM2P54296 1465 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 USP32Q8NFA0 1604 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 AEBP2Q6ZN18 517 aaPredicted RBP9.45□□□□□ -0.9
USPL1-201ENST00000255304 SYTL4Q96C24 671 aaPredicted RBP9.45□□□□□ -0.9
USPL1-201ENST00000255304 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 RIMS2Q9UQ26 1411 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 MED14O60244 1454 aa9.45□□□□□ -0.9
USPL1-201ENST00000255304 TEFQ10587 303 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 KIAA1211Q6ZU35 1233 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 MPNDQ8N594 471 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 TSPYL4Q9UJ04 414 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 NSD3Q9BZ95 1437 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 USHBP1Q8N6Y0 703 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 NOB1Q9ULX3 412 aaKnown RBP9.44□□□□□ -0.9
USPL1-201ENST00000255304 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
USPL1-201ENST00000255304 ROBO2Q9HCK4 1378 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 WWC1Q8IX03 1113 aa9.44□□□□□ -0.9
USPL1-201ENST00000255304 SETD1BQ9UPS6 1966 aaKnown RBP9.43□□□□□ -0.9
USPL1-201ENST00000255304 ARHGAP23Q9P227 1491 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 PTMAP06454 111 aaKnown RBP9.43□□□□□ -0.9
USPL1-201ENST00000255304 KIAA1210Q9ULL0 1709 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 ESPNB1AK53 854 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 MCM10Q7L590 875 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 KAT6BQ8WYB5 2073 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 TMEM2Q9UHN6 1383 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 FAM83GA6ND36 823 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 NALCNQ8IZF0 1738 aa9.43□□□□□ -0.9
USPL1-201ENST00000255304 NLRP2Q9NX02 1062 aa9.42□□□□□ -0.9
USPL1-201ENST00000255304 CALD1Q05682 793 aaKnown RBP9.42□□□□□ -0.9
USPL1-201ENST00000255304 C8orf34Q49A92 452 aa9.42□□□□□ -0.9
USPL1-201ENST00000255304 C14orf93Q9H972 538 aaKnown RBP9.42□□□□□ -0.9
USPL1-201ENST00000255304 CHD2O14647 1828 aaKnown RBP9.42□□□□□ -0.9
USPL1-201ENST00000255304 SLIT1O75093 1534 aa9.41□□□□□ -0.9
USPL1-201ENST00000255304 BCL11BQ9C0K0 894 aaPredicted RBP9.41□□□□□ -0.9
USPL1-201ENST00000255304 CD163L1Q9NR16 1453 aa9.41□□□□□ -0.9
USPL1-201ENST00000255304 TRAK2O60296 914 aa9.41□□□□□ -0.9
USPL1-201ENST00000255304 ZC3H6P61129 1189 aaKnown RBP9.41□□□□□ -0.9
USPL1-201ENST00000255304 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
USPL1-201ENST00000255304 SPINK5Q9NQ38 1064 aaPredicted RBP9.41□□□□□ -0.9
USPL1-201ENST00000255304 LAMC1P11047 1609 aa9.4□□□□□ -0.9
USPL1-201ENST00000255304 SETBP1Q9Y6X0 1596 aa9.4□□□□□ -0.9
USPL1-201ENST00000255304 PCNTO95613 3336 aa9.4□□□□□ -0.9
USPL1-201ENST00000255304 PDE4CQ08493 712 aa9.4□□□□□ -0.91
USPL1-201ENST00000255304 TWISTNBQ3B726 338 aaPredicted RBP9.4□□□□□ -0.91
USPL1-201ENST00000255304 MSNP26038 577 aaKnown RBP9.39□□□□□ -0.91
USPL1-201ENST00000255304 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
USPL1-201ENST00000255304 KDM5AP29375 1690 aaKnown RBP9.39□□□□□ -0.91
USPL1-201ENST00000255304 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
USPL1-201ENST00000255304 CLCN1P35523 988 aa9.39□□□□□ -0.91
USPL1-201ENST00000255304 DNTTIP2Q5QJE6 756 aaKnown RBP9.39□□□□□ -0.91
USPL1-201ENST00000255304 XRN1Q8IZH2 1706 aaKnown RBP9.39□□□□□ -0.91
USPL1-201ENST00000255304 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
USPL1-201ENST00000255304 IGSF3O75054 1194 aa9.39□□□□□ -0.91
USPL1-201ENST00000255304 NUDT16Q96DE0 195 aaKnown RBP9.39□□□□□ -0.91
USPL1-201ENST00000255304 DMRT2Q9Y5R5 561 aa9.39□□□□□ -0.91
USPL1-201ENST00000255304 PRR36Q9H6K5 1346 aa9.39□□□□□ -0.91
USPL1-201ENST00000255304 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 SLFN5Q08AF3 891 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 LMOD3Q0VAK6 560 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 CHMP4BQ9H444 224 aaKnown RBP9.38□□□□□ -0.91
USPL1-201ENST00000255304 ERBB4Q15303 1308 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 MAP4K4O95819 1239 aaPredicted RBP9.38□□□□□ -0.91
USPL1-201ENST00000255304 TMPOP42166 694 aaKnown RBP9.38□□□□□ -0.91
USPL1-201ENST00000255304 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
USPL1-201ENST00000255304 SSH1Q8WYL5 1049 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 FOXO3O43524 673 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 C1orf141Q5JVX7 400 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 DUSP27Q5VZP5 1158 aa9.38□□□□□ -0.91
USPL1-201ENST00000255304 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
USPL1-201ENST00000255304 C9orf78Q9NZ63 289 aaPredicted RBP9.38□□□□□ -0.91
USPL1-201ENST00000255304 NKTRP30414 1462 aaKnown RBP9.38□□□□□ -0.91
USPL1-201ENST00000255304 F6X3S4 739 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
USPL1-201ENST00000255304 TMEM57Q8N5G2 664 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 ANO2Q9NQ90 1003 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
USPL1-201ENST00000255304 KCNA6P17658 529 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 GRPEL1Q9HAV7 217 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 SLC52A1Q9NWF4 448 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 FOSBP53539 338 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
USPL1-201ENST00000255304 ANXA1P04083 346 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms