RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 DIAPH3Q9NSV4 1193 aa21.31■■□□□ 1
NDFIP1-201ENST00000253814 TRIM35Q9UPQ4 493 aa21.31■■□□□ 1
NDFIP1-201ENST00000253814 SURF6O75683 361 aaKnown RBP21.3■■□□□ 1
NDFIP1-201ENST00000253814 C8orf58Q8NAV2 365 aa21.3■■□□□ 1
NDFIP1-201ENST00000253814 KRT24Q2M2I5 525 aa21.3■■□□□ 1
NDFIP1-201ENST00000253814 CWC22Q9HCG8 908 aaKnown RBP21.3■■□□□ 1
NDFIP1-201ENST00000253814 SMC3Q9UQE7 1217 aa21.3■■□□□ 1
NDFIP1-201ENST00000253814 FBXO31Q5XUX0 539 aaPredicted RBP21.29■■□□□ 1
NDFIP1-201ENST00000253814 LARP6Q9BRS8 491 aaKnown RBP21.29■■□□□ 1
NDFIP1-201ENST00000253814 MBD3O95983 291 aa21.29■■□□□ 1
NDFIP1-201ENST00000253814 FANCAO15360 1455 aa21.29■■□□□ 1
NDFIP1-201ENST00000253814 CCDC39Q9UFE4 941 aa21.29■■□□□ 1
NDFIP1-201ENST00000253814 RAB3GAP1Q15042 981 aa21.28■■□□□ 1
NDFIP1-201ENST00000253814 CSPP1Q1MSJ5 1256 aa21.28■■□□□ 1
NDFIP1-201ENST00000253814 ZRANB1Q9UGI0 708 aa21.28■■□□□ 1
NDFIP1-201ENST00000253814 UQCRHLA0A096LP55 91 aa21.28■■□□□ 1
NDFIP1-201ENST00000253814 UQCRHP07919 91 aa21.28■■□□□ 1
NDFIP1-201ENST00000253814 TSPY26PQ9H489 355 aa21.28■■□□□ 1
NDFIP1-201ENST00000253814 ANKRD36BQ8N2N9 1353 aa21.27■■□□□ 1
NDFIP1-201ENST00000253814 GNAI2P04899 355 aa21.27■■□□□ 1
NDFIP1-201ENST00000253814 SNX21Q969T3 373 aa21.27■■□□□ 1
NDFIP1-201ENST00000253814 IFT57Q9NWB7 429 aa21.27■■□□□ 1
NDFIP1-201ENST00000253814 SLC52A1Q9NWF4 448 aa21.27■■□□□ 1
NDFIP1-201ENST00000253814 UBTFL1P0CB47 393 aaPredicted RBP21.27■□□□□ 0.99
NDFIP1-201ENST00000253814 KLHL40Q2TBA0 621 aa21.27■□□□□ 0.99
NDFIP1-201ENST00000253814 RPAP2Q8IXW5 612 aaPredicted RBP21.27■□□□□ 0.99
NDFIP1-201ENST00000253814 ZGPATQ8N5A5 531 aaKnown RBP21.26■□□□□ 0.99
NDFIP1-201ENST00000253814 VAMP4O75379 141 aa21.26■□□□□ 0.99
NDFIP1-201ENST00000253814 HSP90B1P14625 803 aaKnown RBP21.26■□□□□ 0.99
NDFIP1-201ENST00000253814 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
NDFIP1-201ENST00000253814 SDSP20132 328 aa21.25■□□□□ 0.99
NDFIP1-201ENST00000253814 OTUD7AQ8TE49 926 aaPredicted RBP21.25■□□□□ 0.99
NDFIP1-201ENST00000253814 RTEL1-TNFRSF6BF6WH68 1400 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 GAS2L3Q86XJ1 694 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 MRPL50Q8N5N7 158 aaKnown RBP21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 MEIS3Q99687 375 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 LRRCC1Q9C099 1032 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 PTPRTO14522 1441 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 ZSCAN23Q3MJ62 389 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 ATP6V1DQ9Y5K8 247 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 TTC22Q5TAA0 569 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 SPC24Q8NBT2 197 aa21.24■□□□□ 0.99
NDFIP1-201ENST00000253814 IL16Q14005 1332 aa21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 ZBTB7BO15156 539 aaPredicted RBP21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 DDX54Q8TDD1 881 aaKnown RBP21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 SAMD9LQ8IVG5 1584 aa21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 MAST1Q9Y2H9 1570 aa21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 A0A1W2PP64 1363 aa21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 RBM25P49756 843 aaKnown RBP21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 C9orf78Q9NZ63 289 aaPredicted RBP21.23■□□□□ 0.99
NDFIP1-201ENST00000253814 PRDM15P57071 1507 aaPredicted RBP21.22■□□□□ 0.99
NDFIP1-201ENST00000253814 GPATCH3Q96I76 525 aa21.22■□□□□ 0.99
NDFIP1-201ENST00000253814 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
NDFIP1-201ENST00000253814 GOLGA6L6A8MZA4 724 aa21.22■□□□□ 0.99
NDFIP1-201ENST00000253814 NUTM1Q86Y26 1132 aa21.22■□□□□ 0.99
NDFIP1-201ENST00000253814 ZNF592Q92610 1267 aa21.22■□□□□ 0.99
NDFIP1-201ENST00000253814 GNAI3P08754 354 aa21.21■□□□□ 0.99
NDFIP1-201ENST00000253814 FOSBP53539 338 aa21.21■□□□□ 0.99
NDFIP1-201ENST00000253814 PRIM1P49642 420 aaKnown RBP21.21■□□□□ 0.99
NDFIP1-201ENST00000253814 CD2BP2O95400 341 aaKnown RBP21.21■□□□□ 0.99
NDFIP1-201ENST00000253814 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
NDFIP1-201ENST00000253814 ZMYND15Q9H091 742 aa21.2■□□□□ 0.98
NDFIP1-201ENST00000253814 NSD2O96028 1365 aa21.2■□□□□ 0.98
NDFIP1-201ENST00000253814 TRPM1Q7Z4N2 1603 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 A0A0G2JS52 829 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 TEFQ10587 303 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 AEBP1Q8IUX7 1158 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 FBXW7Q969H0 707 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 CHAMP1Q96JM3 812 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 IFIT2P09913 472 aaKnown RBP21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 ZKSCAN1P17029 563 aaPredicted RBP21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 MCM2P49736 904 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 PLEKHM2Q8IWE5 1019 aa21.19■□□□□ 0.98
NDFIP1-201ENST00000253814 ERVK-7P63135 1459 aa21.18■□□□□ 0.98
NDFIP1-201ENST00000253814 POLR1AO95602 1720 aaPredicted RBP21.18■□□□□ 0.98
NDFIP1-201ENST00000253814 NLRP6P59044 892 aa21.18■□□□□ 0.98
NDFIP1-201ENST00000253814 CDC42BPAQ5VT25 1732 aa21.17■□□□□ 0.98
NDFIP1-201ENST00000253814 ARHGEF5Q12774 1597 aa21.17■□□□□ 0.98
NDFIP1-201ENST00000253814 CCDC61Q9Y6R9 512 aa21.17■□□□□ 0.98
NDFIP1-201ENST00000253814 BICD2Q8TD16 824 aa21.17■□□□□ 0.98
NDFIP1-201ENST00000253814 CCT4P50991 539 aaKnown RBP21.16■□□□□ 0.98
NDFIP1-201ENST00000253814 CWC27Q6UX04 472 aaKnown RBP21.16■□□□□ 0.98
NDFIP1-201ENST00000253814 UGGT1Q9NYU2 1555 aa21.16■□□□□ 0.98
NDFIP1-201ENST00000253814 ATP10AO60312 1499 aa21.16■□□□□ 0.98
NDFIP1-201ENST00000253814 CCDC30Q5VVM6 783 aa21.16■□□□□ 0.98
NDFIP1-201ENST00000253814 NCKAP5LQ9HCH0 1330 aa21.16■□□□□ 0.98
NDFIP1-201ENST00000253814 MX1P20591 662 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 USP25Q9UHP3 1055 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 H3BQV1 296 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 IFFO2Q5TF58 517 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 RUFY2Q8WXA3 655 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 ABCC2Q92887 1545 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 HDGFL1Q5TGJ6 251 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 TMX3Q96JJ7 454 aa21.15■□□□□ 0.98
NDFIP1-201ENST00000253814 AIMP1Q12904 312 aaKnown RBP21.14■□□□□ 0.98
NDFIP1-201ENST00000253814 PKP1Q13835 747 aa21.14■□□□□ 0.98
NDFIP1-201ENST00000253814 ZNF830Q96NB3 372 aaPredicted RBP21.14■□□□□ 0.98
NDFIP1-201ENST00000253814 WDR33Q9C0J8 1336 aaKnown RBP21.14■□□□□ 0.97
NDFIP1-201ENST00000253814 FSD2A1L4K1 749 aa21.14■□□□□ 0.97
NDFIP1-201ENST00000253814 DTNBO60941 627 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms