RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.261e-6■■■□□ 17.7
LAMA5-201ENST00000252999 GOPCQ9HD26 462 aa13.43□□□□□ -0.26
LAMA5-201ENST00000252999 MAP9Q49MG5 647 aa13.43□□□□□ -0.26
LAMA5-201ENST00000252999 BCCIPQ9P287 314 aaKnown RBP eCLIP13.43□□□□□ -0.26
LAMA5-201ENST00000252999 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
LAMA5-201ENST00000252999 IFFO1Q0D2I5 559 aa13.43□□□□□ -0.26
LAMA5-201ENST00000252999 SURF6O75683 361 aaKnown RBP13.43□□□□□ -0.26
LAMA5-201ENST00000252999 ANAPC15P60006 121 aa13.43□□□□□ -0.26
LAMA5-201ENST00000252999 GNAI1P63096 354 aa13.43□□□□□ -0.26
LAMA5-201ENST00000252999 CARMIL2Q6F5E8 1435 aa13.42□□□□□ -0.26
LAMA5-201ENST00000252999 HIP1O00291 1037 aa13.42□□□□□ -0.26
LAMA5-201ENST00000252999 STAMBPO95630 424 aa13.42□□□□□ -0.26
LAMA5-201ENST00000252999 SPATA24Q86W54 205 aa13.42□□□□□ -0.26
LAMA5-201ENST00000252999 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
LAMA5-201ENST00000252999 UPF3BQ9BZI7 483 aaKnown RBP13.42□□□□□ -0.26
LAMA5-201ENST00000252999 EFCAB2Q5VUJ9 269 aa13.42□□□□□ -0.26
LAMA5-201ENST00000252999 CYP46A1Q9Y6A2 500 aa13.42□□□□□ -0.26
LAMA5-201ENST00000252999 SPATA32Q96LK8 384 aa13.41□□□□□ -0.26
LAMA5-201ENST00000252999 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
LAMA5-201ENST00000252999 CALCOCO1Q9P1Z2 691 aa13.41□□□□□ -0.26
LAMA5-201ENST00000252999 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
LAMA5-201ENST00000252999 GSTTP1A0A1W2PQM5 241 aa13.41□□□□□ -0.26
LAMA5-201ENST00000252999 SYCE3A1L190 88 aa13.41□□□□□ -0.26
LAMA5-201ENST00000252999 LUZP1Q86V48 1076 aa13.41□□□□□ -0.26
LAMA5-201ENST00000252999 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
LAMA5-201ENST00000252999 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
LAMA5-201ENST00000252999 DESP17661 470 aa13.4□□□□□ -0.26
LAMA5-201ENST00000252999 PSME1Q06323 249 aa13.4□□□□□ -0.26
LAMA5-201ENST00000252999 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.26
LAMA5-201ENST00000252999 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
LAMA5-201ENST00000252999 AAMPQ13685 434 aa13.4□□□□□ -0.26
LAMA5-201ENST00000252999 DNA2P51530 1060 aa13.4□□□□□ -0.26
LAMA5-201ENST00000252999 MAP4K4O95819 1239 aaPredicted RBP13.4□□□□□ -0.27
LAMA5-201ENST00000252999 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.279e-7■■■■□ 23.7
LAMA5-201ENST00000252999 CASQ1P31415 396 aa13.39□□□□□ -0.27
LAMA5-201ENST00000252999 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
LAMA5-201ENST00000252999 SERPINA10Q9UK55 444 aa13.39□□□□□ -0.27
LAMA5-201ENST00000252999 K7ELQ4 463 aaPredicted RBP13.39□□□□□ -0.27
LAMA5-201ENST00000252999 SFPQP23246 707 aaKnown RBP eCLIP13.39□□□□□ -0.274e-8■■■■□ 22.5
LAMA5-201ENST00000252999 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
LAMA5-201ENST00000252999 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
LAMA5-201ENST00000252999 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
LAMA5-201ENST00000252999 CCDC175P0C221 793 aa13.39□□□□□ -0.27
LAMA5-201ENST00000252999 FAM177BA6PVY3 158 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 ANKRD1Q15327 319 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 CAMK4Q16566 473 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 FAM107BQ9H098 131 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 IMMTQ16891 758 aaKnown RBP13.38□□□□□ -0.27
LAMA5-201ENST00000252999 CCDC178Q5BJE1 867 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 KIF18AQ8NI77 898 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 PIBF1Q8WXW3 757 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 GBP3Q9H0R5 595 aa13.38□□□□□ -0.27
LAMA5-201ENST00000252999 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
LAMA5-201ENST00000252999 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
LAMA5-201ENST00000252999 ZNF397Q8NF99 534 aaPredicted RBP13.37□□□□□ -0.27
LAMA5-201ENST00000252999 ZNF526Q8TF50 670 aaPredicted RBP13.37□□□□□ -0.27
LAMA5-201ENST00000252999 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
LAMA5-201ENST00000252999 KIF2AO00139 706 aaPredicted RBP13.37□□□□□ -0.27
LAMA5-201ENST00000252999 SPA17Q15506 151 aa13.37□□□□□ -0.27
LAMA5-201ENST00000252999 MICALCLQ6ZW33 695 aa13.37□□□□□ -0.27
LAMA5-201ENST00000252999 KIF5CO60282 957 aa13.36□□□□□ -0.27
LAMA5-201ENST00000252999 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
LAMA5-201ENST00000252999 ERC1Q8IUD2 1116 aa13.36□□□□□ -0.27
LAMA5-201ENST00000252999 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
LAMA5-201ENST00000252999 HOOK3Q86VS8 718 aa13.36□□□□□ -0.27
LAMA5-201ENST00000252999 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.276e-11■■■■■ 38.6
LAMA5-201ENST00000252999 TMX1Q9H3N1 280 aa13.36□□□□□ -0.27
LAMA5-201ENST00000252999 NOL7Q9UMY1 257 aaKnown RBP13.36□□□□□ -0.27
LAMA5-201ENST00000252999 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
LAMA5-201ENST00000252999 PPM1EQ8WY54 764 aa13.35□□□□□ -0.27
LAMA5-201ENST00000252999 MNAT1P51948 309 aa13.35□□□□□ -0.27
LAMA5-201ENST00000252999 CTR9Q6PD62 1173 aa13.35□□□□□ -0.27
LAMA5-201ENST00000252999 PSMD1Q99460 953 aa13.35□□□□□ -0.27
LAMA5-201ENST00000252999 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
LAMA5-201ENST00000252999 SMTNL1A8MU46 457 aa13.35□□□□□ -0.27
LAMA5-201ENST00000252999 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
LAMA5-201ENST00000252999 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
LAMA5-201ENST00000252999 KLHL10Q6JEL2 608 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 SIL1Q9H173 461 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 GOLGA4Q13439 2230 aaKnown RBP13.34□□□□□ -0.27
LAMA5-201ENST00000252999 KIF6Q6ZMV9 814 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 CNTLNQ9NXG0 1405 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 GNAI3P08754 354 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 MCM3P25205 808 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 CDKL5O76039 1030 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 C16orf45Q96MC5 204 aaPredicted RBP13.34□□□□□ -0.27
LAMA5-201ENST00000252999 SOGA3Q5TF21 947 aa13.34□□□□□ -0.27
LAMA5-201ENST00000252999 PPM1FP49593 454 aaPredicted RBP13.33□□□□□ -0.27
LAMA5-201ENST00000252999 GNAI2P04899 355 aa13.33□□□□□ -0.27
LAMA5-201ENST00000252999 MCM4P33991 863 aa13.33□□□□□ -0.27
LAMA5-201ENST00000252999 CETN2P41208 172 aa13.33□□□□□ -0.28
LAMA5-201ENST00000252999 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.28
LAMA5-201ENST00000252999 CNNM1Q9NRU3 951 aa13.33□□□□□ -0.28
LAMA5-201ENST00000252999 AKNAQ7Z591 1439 aa13.33□□□□□ -0.28
LAMA5-201ENST00000252999 GCOM1H8Y6P7 765 aaPredicted RBP13.33□□□□□ -0.28
LAMA5-201ENST00000252999 MYZAPP0CAP1 466 aa13.33□□□□□ -0.28
LAMA5-201ENST00000252999 RAPGEF4Q8WZA2 1011 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms