RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 SYAP1Q96A49 352 aaPredicted RBP16.68■□□□□ 0.26
NCLN-201ENST00000246117 NUP160Q12769 1436 aa16.68■□□□□ 0.26
NCLN-201ENST00000246117 WASLO00401 505 aaPredicted RBP16.68■□□□□ 0.26
NCLN-201ENST00000246117 CT47B1P0C2W7 299 aaPredicted RBP16.68■□□□□ 0.26
NCLN-201ENST00000246117 R3HCC1Q9Y3T6 440 aaKnown RBP16.68■□□□□ 0.26
NCLN-201ENST00000246117 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
NCLN-201ENST00000246117 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 A0A1W2PP64 1363 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 DUOX2Q9NRD8 1548 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 NINLQ9Y2I6 1382 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 GPATCH3Q96I76 525 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 RABEP1Q15276 862 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
NCLN-201ENST00000246117 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
NCLN-201ENST00000246117 PTMSP20962 102 aa16.66■□□□□ 0.26
NCLN-201ENST00000246117 CCDC30Q5VVM6 783 aa16.66■□□□□ 0.26
NCLN-201ENST00000246117 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
NCLN-201ENST00000246117 KDM5CP41229 1560 aa16.66■□□□□ 0.26
NCLN-201ENST00000246117 ERC2O15083 957 aa16.65■□□□□ 0.26
NCLN-201ENST00000246117 MYL6BP14649 208 aa16.65■□□□□ 0.26
NCLN-201ENST00000246117 POLR3AO14802 1390 aaPredicted RBP16.65■□□□□ 0.26
NCLN-201ENST00000246117 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
NCLN-201ENST00000246117 TULP1O00294 542 aaPredicted RBP16.65■□□□□ 0.26
NCLN-201ENST00000246117 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
NCLN-201ENST00000246117 ASXL2Q76L83 1435 aa16.65■□□□□ 0.26
NCLN-201ENST00000246117 XRCC6P12956 609 aaKnown RBP eCLIP16.65■□□□□ 0.26
NCLN-201ENST00000246117 STK3Q13188 491 aa16.65■□□□□ 0.26
NCLN-201ENST00000246117 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.25
NCLN-201ENST00000246117 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
NCLN-201ENST00000246117 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
NCLN-201ENST00000246117 VAMP4O75379 141 aa16.64■□□□□ 0.25
NCLN-201ENST00000246117 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
NCLN-201ENST00000246117 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
NCLN-201ENST00000246117 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
NCLN-201ENST00000246117 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
NCLN-201ENST00000246117 GNAI3P08754 354 aa16.63■□□□□ 0.25
NCLN-201ENST00000246117 JARID2Q92833 1246 aaPredicted RBP16.63■□□□□ 0.25
NCLN-201ENST00000246117 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
NCLN-201ENST00000246117 SYCE3A1L190 88 aa16.63■□□□□ 0.25
NCLN-201ENST00000246117 ZC3H6P61129 1189 aaKnown RBP16.63■□□□□ 0.25
NCLN-201ENST00000246117 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.25
NCLN-201ENST00000246117 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
NCLN-201ENST00000246117 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
NCLN-201ENST00000246117 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
NCLN-201ENST00000246117 NUCB1Q02818 461 aa16.63■□□□□ 0.25
NCLN-201ENST00000246117 FERMT3Q86UX7 667 aa16.62■□□□□ 0.25
NCLN-201ENST00000246117 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
NCLN-201ENST00000246117 ESPNB1AK53 854 aa16.62■□□□□ 0.25
NCLN-201ENST00000246117 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
NCLN-201ENST00000246117 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
NCLN-201ENST00000246117 TOMM22Q9NS69 142 aa16.62■□□□□ 0.25
NCLN-201ENST00000246117 ALDH1L2Q3SY69 923 aa16.62■□□□□ 0.25
NCLN-201ENST00000246117 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
NCLN-201ENST00000246117 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
NCLN-201ENST00000246117 GNL2Q13823 731 aaKnown RBP16.61■□□□□ 0.25
NCLN-201ENST00000246117 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
NCLN-201ENST00000246117 H3BQV1 296 aa16.61■□□□□ 0.25
NCLN-201ENST00000246117 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
NCLN-201ENST00000246117 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
NCLN-201ENST00000246117 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
NCLN-201ENST00000246117 ZMYM4Q5VZL5 1548 aa16.61■□□□□ 0.25
NCLN-201ENST00000246117 MPRIPQ6WCQ1 1025 aa16.61■□□□□ 0.25
NCLN-201ENST00000246117 CCDC85AQ96PX6 553 aaPredicted RBP16.61■□□□□ 0.25
NCLN-201ENST00000246117 SDSP20132 328 aa16.6■□□□□ 0.25
NCLN-201ENST00000246117 ACEP12821 1306 aa16.6■□□□□ 0.25
NCLN-201ENST00000246117 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
NCLN-201ENST00000246117 CHAF1AQ13111 956 aaPredicted RBP16.6■□□□□ 0.25
NCLN-201ENST00000246117 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
NCLN-201ENST00000246117 BMP2KLQ5H9B9 411 aa16.6■□□□□ 0.25
NCLN-201ENST00000246117 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
NCLN-201ENST00000246117 NPHP1O15259 732 aa16.59■□□□□ 0.25
NCLN-201ENST00000246117 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
NCLN-201ENST00000246117 FSD1Q9BTV5 496 aa16.59■□□□□ 0.25
NCLN-201ENST00000246117 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
NCLN-201ENST00000246117 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
NCLN-201ENST00000246117 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
NCLN-201ENST00000246117 ZNF521Q96K83 1311 aa16.59■□□□□ 0.25
NCLN-201ENST00000246117 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
NCLN-201ENST00000246117 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
NCLN-201ENST00000246117 BICD2Q8TD16 824 aa16.59■□□□□ 0.25
NCLN-201ENST00000246117 G2E3Q7L622 706 aa16.58■□□□□ 0.25
NCLN-201ENST00000246117 TTC5Q8N0Z6 440 aa16.58■□□□□ 0.25
NCLN-201ENST00000246117 ZGPATQ8N5A5 531 aaKnown RBP16.58■□□□□ 0.25
NCLN-201ENST00000246117 SPC24Q8NBT2 197 aa16.58■□□□□ 0.25
NCLN-201ENST00000246117 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
NCLN-201ENST00000246117 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.24
NCLN-201ENST00000246117 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
NCLN-201ENST00000246117 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
NCLN-201ENST00000246117 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
NCLN-201ENST00000246117 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
NCLN-201ENST00000246117 PTPRTO14522 1441 aa16.57■□□□□ 0.24
NCLN-201ENST00000246117 MX1P20591 662 aa16.56■□□□□ 0.24
NCLN-201ENST00000246117 PIP4K2AP48426 406 aaPredicted RBP16.56■□□□□ 0.24
NCLN-201ENST00000246117 FLIIQ13045 1269 aa16.56■□□□□ 0.24
NCLN-201ENST00000246117 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
NCLN-201ENST00000246117 RAPGEF4Q8WZA2 1011 aa16.56■□□□□ 0.24
NCLN-201ENST00000246117 TCEANC2Q96MN5 208 aa16.56■□□□□ 0.24
NCLN-201ENST00000246117 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
NCLN-201ENST00000246117 WDR7Q9Y4E6 1490 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms