RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 CEP126Q9P2H0 1117 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 IGHMBP2P38935 993 aaKnown RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 SULT6B1Q6IMI4 303 aa8.72□□□□□ -1.01
SSR1-201ENST00000244763 FAM177BA6PVY3 158 aa8.72□□□□□ -1.01
SSR1-201ENST00000244763 ANKRD18AQ8IVF6 992 aa8.72□□□□□ -1.01
SSR1-201ENST00000244763 LRPPRCP42704 1394 aaKnown RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 TROQ12816 1431 aaPredicted RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 NUTM2BA6NNL0 878 aaPredicted RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 NUTM2EB1AL46 878 aaPredicted RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 RABEP1Q15276 862 aa8.72□□□□□ -1.01
SSR1-201ENST00000244763 ZNF530Q6P9A1 599 aaPredicted RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 NUTM2AQ8IVF1 878 aaPredicted RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 CCDC61Q9Y6R9 512 aa8.72□□□□□ -1.01
SSR1-201ENST00000244763 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
SSR1-201ENST00000244763 EPRSP07814 1512 aaKnown RBP8.72□□□□□ -1.01
SSR1-201ENST00000244763 AKAP2Q9Y2D5 859 aa8.72□□□□□ -1.01
SSR1-201ENST00000244763 WASF1Q92558 559 aa8.71□□□□□ -1.01
SSR1-201ENST00000244763 MPHOSPH10O00566 681 aaKnown RBP8.71□□□□□ -1.01
SSR1-201ENST00000244763 RBM5P52756 815 aaKnown RBP eCLIP8.71□□□□□ -1.01
SSR1-201ENST00000244763 ATP2B2Q01814 1243 aa8.71□□□□□ -1.01
SSR1-201ENST00000244763 ZSCAN29Q8IWY8 852 aaPredicted RBP8.71□□□□□ -1.01
SSR1-201ENST00000244763 BTBD11A6QL63 1104 aa8.71□□□□□ -1.01
SSR1-201ENST00000244763 SMC2O95347 1197 aa8.71□□□□□ -1.01
SSR1-201ENST00000244763 SLC4A2P04920 1241 aa8.71□□□□□ -1.01
SSR1-201ENST00000244763 CYP46A1Q9Y6A2 500 aa8.71□□□□□ -1.01
SSR1-201ENST00000244763 HSP90AB3PQ58FF7 597 aa8.71□□□□□ -1.02
SSR1-201ENST00000244763 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
SSR1-201ENST00000244763 FAM13BQ9NYF5 915 aa8.71□□□□□ -1.02
SSR1-201ENST00000244763 PPP6R1Q9UPN7 881 aa8.71□□□□□ -1.02
SSR1-201ENST00000244763 CFTRP13569 1480 aa8.71□□□□□ -1.02
SSR1-201ENST00000244763 PDCL3Q9H2J4 239 aa8.71□□□□□ -1.02
SSR1-201ENST00000244763 AMOTQ4VCS5 1084 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 PPP2R1AP30153 589 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 MTMR7Q9Y216 660 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 TNIP1Q15025 636 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 SLF2Q8IX21 1173 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 CAGE1Q8TC20 777 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 FCHSD2O94868 740 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
SSR1-201ENST00000244763 IFT57Q9NWB7 429 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 CFAP45Q9UL16 551 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
SSR1-201ENST00000244763 HSP90AA2PQ14568 343 aaPredicted RBP8.69□□□□□ -1.02
SSR1-201ENST00000244763 GNAT3A8MTJ3 354 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 ZPR1O75312 459 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 STK38Q15208 465 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 PDILTQ8N807 584 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 CEP131Q9UPN4 1083 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 CAVIN4Q5BKX8 364 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 MTERF4Q7Z6M4 381 aaKnown RBP8.69□□□□□ -1.02
SSR1-201ENST00000244763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.69□□□□□ -1.02
SSR1-201ENST00000244763 CCDC39Q9UFE4 941 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 UBAC1Q9BSL1 405 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
SSR1-201ENST00000244763 NEK4P51957 841 aa8.68□□□□□ -1.02
SSR1-201ENST00000244763 ERBINQ96RT1 1412 aa8.68□□□□□ -1.02
SSR1-201ENST00000244763 EXOSC9Q06265 439 aaKnown RBP8.68□□□□□ -1.02
SSR1-201ENST00000244763 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
SSR1-201ENST00000244763 MYL6BP14649 208 aa8.68□□□□□ -1.02
SSR1-201ENST00000244763 TDO2P48775 406 aa8.68□□□□□ -1.02
SSR1-201ENST00000244763 RPAP2Q8IXW5 612 aaPredicted RBP8.68□□□□□ -1.02
SSR1-201ENST00000244763 RAB11FIP3O75154 756 aa8.68□□□□□ -1.02
SSR1-201ENST00000244763 FANCIQ9NVI1 1328 aa8.68□□□□□ -1.02
SSR1-201ENST00000244763 WDR33Q9C0J8 1336 aaKnown RBP8.67□□□□□ -1.02
SSR1-201ENST00000244763 CCDC141Q6ZP82 1450 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 CC2D2AQ9P2K1 1620 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
SSR1-201ENST00000244763 TEX13AQ9BXU3 409 aaPredicted RBP8.67□□□□□ -1.02
SSR1-201ENST00000244763 HMGXB3Q12766 1538 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
SSR1-201ENST00000244763 BLOC1S2Q6QNY1 142 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 ATF7IPQ6VMQ6 1270 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 PANK1Q8TE04 598 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 CCDC196A0A1B0GTZ2 297 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 POTEJP0CG39 1038 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 ZNF76P36508 570 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 FOSBP53539 338 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 PIP4K2BP78356 416 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 ARID3AQ99856 593 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 SLC12A5Q9H2X9 1139 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 KRT85P78386 507 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 CBFA2T2O43439 604 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 MRE11P49959 708 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 TMOD3Q9NYL9 352 aa8.67□□□□□ -1.02
SSR1-201ENST00000244763 IFIT1P09914 478 aaKnown RBP8.67□□□□□ -1.02
SSR1-201ENST00000244763 FKBP4Q02790 459 aaKnown RBP eCLIP8.67□□□□□ -1.02
SSR1-201ENST00000244763 NOB1Q9ULX3 412 aaKnown RBP8.67□□□□□ -1.02
SSR1-201ENST00000244763 DNMBPQ6XZF7 1577 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
SSR1-201ENST00000244763 SEPT7Q16181 437 aaKnown RBP8.66□□□□□ -1.02
SSR1-201ENST00000244763 SLC26A8Q96RN1 970 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 TRIM5Q9C035 493 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 SNAPC4Q5SXM2 1469 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 PPFIBP1Q86W92 1011 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 CCDC191Q8NCU4 936 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 DEF6Q9H4E7 631 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 LAMC3Q9Y6N6 1575 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 ZNF771Q7L3S4 317 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms