RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 FOSBP53539 338 aa11.21□□□□□ -0.62
COL21A1-201ENST00000244728 FANCAO15360 1455 aa11.2□□□□□ -0.62
COL21A1-201ENST00000244728 FAM135AQ9P2D6 1515 aa11.2□□□□□ -0.62
COL21A1-201ENST00000244728 ANKLE2Q86XL3 938 aa11.2□□□□□ -0.62
COL21A1-201ENST00000244728 ATAD2Q6PL18 1390 aa11.2□□□□□ -0.62
COL21A1-201ENST00000244728 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
COL21A1-201ENST00000244728 ZKSCAN1P17029 563 aaPredicted RBP11.2□□□□□ -0.62
COL21A1-201ENST00000244728 MYL6BP14649 208 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 MTERF4Q7Z6M4 381 aaKnown RBP11.19□□□□□ -0.62
COL21A1-201ENST00000244728 SIL1Q9H173 461 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 CWC22Q9HCG8 908 aaKnown RBP11.19□□□□□ -0.62
COL21A1-201ENST00000244728 SYCE3A1L190 88 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
COL21A1-201ENST00000244728 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 TSPY26PQ9H489 355 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 IL1RAPL2Q9NP60 686 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 AMOTL2Q9Y2J4 779 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 PIK3C2GO75747 1445 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 VPS37CA5D8V6 355 aaPredicted RBP11.19□□□□□ -0.62
COL21A1-201ENST00000244728 NRDCO43847 1150 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
COL21A1-201ENST00000244728 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
COL21A1-201ENST00000244728 FAM184AQ8NB25 1140 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 C14orf93Q9H972 538 aaKnown RBP11.19□□□□□ -0.62
COL21A1-201ENST00000244728 ATP6V1DQ9Y5K8 247 aa11.19□□□□□ -0.62
COL21A1-201ENST00000244728 FAM83GA6ND36 823 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 H3BQV1 296 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 BAG4O95429 457 aaKnown RBP11.18□□□□□ -0.62
COL21A1-201ENST00000244728 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 TBC1D9Q6ZT07 1266 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 CREBRFQ8IUR6 639 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 PDCL3Q9H2J4 239 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 GNAI3P08754 354 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 HDAC1Q13547 482 aaPredicted RBP11.18□□□□□ -0.62
COL21A1-201ENST00000244728 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
COL21A1-201ENST00000244728 RUFY2Q8WXA3 655 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
COL21A1-201ENST00000244728 BMP2KLQ5H9B9 411 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 BCORL1Q5H9F3 1711 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 CARD14Q9BXL6 1004 aa11.18□□□□□ -0.62
COL21A1-201ENST00000244728 INSRP06213 1382 aa11.17□□□□□ -0.62
COL21A1-201ENST00000244728 F6X3S4 739 aa11.17□□□□□ -0.62
COL21A1-201ENST00000244728 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
COL21A1-201ENST00000244728 TRAPPC8Q9Y2L5 1435 aa11.17□□□□□ -0.62
COL21A1-201ENST00000244728 A2MP01023 1474 aa11.17□□□□□ -0.62
COL21A1-201ENST00000244728 NUP160Q12769 1436 aa11.17□□□□□ -0.62
COL21A1-201ENST00000244728 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
COL21A1-201ENST00000244728 GNAI2P04899 355 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 KDM4AO75164 1064 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 KLHL40Q2TBA0 621 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 ADGRL2O95490 1459 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 G3V3G9 751 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 ERC2O15083 957 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
COL21A1-201ENST00000244728 NUCB1Q02818 461 aa11.15□□□□□ -0.62
COL21A1-201ENST00000244728 CCDC85AQ96PX6 553 aaPredicted RBP11.15□□□□□ -0.62
COL21A1-201ENST00000244728 PRDM11Q9NQV5 511 aa11.15□□□□□ -0.62
COL21A1-201ENST00000244728 SMC3Q9UQE7 1217 aa11.15□□□□□ -0.62
COL21A1-201ENST00000244728 CCDC27Q2M243 656 aa11.15□□□□□ -0.62
COL21A1-201ENST00000244728 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
COL21A1-201ENST00000244728 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.63
COL21A1-201ENST00000244728 WASHC4Q2M389 1173 aa11.15□□□□□ -0.63
COL21A1-201ENST00000244728 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 SNX21Q969T3 373 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 POLR3AO14802 1390 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 FSD1Q9BTV5 496 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 KIAA0556O60303 1618 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 FYB1O15117 783 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 FIBPO43427 364 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 PTCD1O75127 700 aaKnown RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 MCM2P49736 904 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 HSP90AB4PQ58FF6 505 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 ZNF771Q7L3S4 317 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-201ENST00000244728 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
COL21A1-201ENST00000244728 NUTM2BA6NNL0 878 aaPredicted RBP11.13□□□□□ -0.63
COL21A1-201ENST00000244728 NUTM2EB1AL46 878 aaPredicted RBP11.13□□□□□ -0.63
COL21A1-201ENST00000244728 SRGAP3O43295 1099 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 NUTM2AQ8IVF1 878 aaPredicted RBP11.13□□□□□ -0.63
COL21A1-201ENST00000244728 SMC5Q8IY18 1101 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 RASSF8Q8NHQ8 419 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 HMGN5P82970 282 aaKnown RBP11.13□□□□□ -0.63
COL21A1-201ENST00000244728 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 KAT6BQ8WYB5 2073 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 ZNF521Q96K83 1311 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
COL21A1-201ENST00000244728 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 VPS37DQ86XT2 251 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 PRDM10Q9NQV6 1147 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 ABCA5Q8WWZ7 1642 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms