RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZBTB40Q9NUA8 1239 aa18.23■□□□□ 0.51
HIF3A-202ENST00000244303 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
HIF3A-202ENST00000244303 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
HIF3A-202ENST00000244303 SMC5Q8IY18 1101 aa18.21■□□□□ 0.51
HIF3A-202ENST00000244303 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
HIF3A-202ENST00000244303 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
HIF3A-202ENST00000244303 MON2Q7Z3U7 1717 aa18.21■□□□□ 0.51
HIF3A-202ENST00000244303 SLKQ9H2G2 1235 aaPredicted RBP18.2■□□□□ 0.5
HIF3A-202ENST00000244303 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
HIF3A-202ENST00000244303 CDK12Q9NYV4 1490 aaPredicted RBP18.19■□□□□ 0.5
HIF3A-202ENST00000244303 IL13P35225 146 aa18.19■□□□□ 0.5
HIF3A-202ENST00000244303 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
HIF3A-202ENST00000244303 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
HIF3A-202ENST00000244303 AKAP12Q02952 1782 aa18.18■□□□□ 0.5
HIF3A-202ENST00000244303 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
HIF3A-202ENST00000244303 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
HIF3A-202ENST00000244303 ZNF692Q9BU19 519 aaPredicted RBP18.18■□□□□ 0.5
HIF3A-202ENST00000244303 TBC1D2Q9BYX2 928 aa18.18■□□□□ 0.5
HIF3A-202ENST00000244303 C3P01024 1663 aa18.17■□□□□ 0.5
HIF3A-202ENST00000244303 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
HIF3A-202ENST00000244303 BRPF1P55201 1214 aaPredicted RBP18.16■□□□□ 0.5
HIF3A-202ENST00000244303 COG3Q96JB2 828 aa18.16■□□□□ 0.5
HIF3A-202ENST00000244303 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.16■□□□□ 0.5
HIF3A-202ENST00000244303 VAMP4O75379 141 aa18.16■□□□□ 0.5
HIF3A-202ENST00000244303 ANTXR1Q9H6X2 564 aa18.16■□□□□ 0.5
HIF3A-202ENST00000244303 AATKQ6ZMQ8 1374 aa18.16■□□□□ 0.5
HIF3A-202ENST00000244303 MFAP1P55081 439 aaKnown RBP18.15■□□□□ 0.5
HIF3A-202ENST00000244303 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
HIF3A-202ENST00000244303 CALD1Q05682 793 aaKnown RBP18.15■□□□□ 0.5
HIF3A-202ENST00000244303 TSPYL6Q8N831 410 aa18.15■□□□□ 0.5
HIF3A-202ENST00000244303 C22orf23Q9BZE7 217 aa18.15■□□□□ 0.5
HIF3A-202ENST00000244303 GNAI1P63096 354 aa18.14■□□□□ 0.49
HIF3A-202ENST00000244303 MRPL50Q8N5N7 158 aaKnown RBP18.14■□□□□ 0.49
HIF3A-202ENST00000244303 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
HIF3A-202ENST00000244303 SLIT1O75093 1534 aa18.14■□□□□ 0.49
HIF3A-202ENST00000244303 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
HIF3A-202ENST00000244303 NUCB1Q02818 461 aa18.14■□□□□ 0.49
HIF3A-202ENST00000244303 RRS1Q15050 365 aaKnown RBP18.14■□□□□ 0.49
HIF3A-202ENST00000244303 PTCH1Q13635 1447 aa18.13■□□□□ 0.49
HIF3A-202ENST00000244303 MBIPQ9NS73 344 aa18.13■□□□□ 0.49
HIF3A-202ENST00000244303 ZNF853P0CG23 659 aa18.12■□□□□ 0.49
HIF3A-202ENST00000244303 AMOTL2Q9Y2J4 779 aa18.12■□□□□ 0.49
HIF3A-202ENST00000244303 TBX22Q9Y458 520 aa18.12■□□□□ 0.49
HIF3A-202ENST00000244303 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
HIF3A-202ENST00000244303 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
HIF3A-202ENST00000244303 LNPKQ9C0E8 428 aa18.12■□□□□ 0.49
HIF3A-202ENST00000244303 BRPF3Q9ULD4 1205 aa18.12■□□□□ 0.49
HIF3A-202ENST00000244303 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
HIF3A-202ENST00000244303 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
HIF3A-202ENST00000244303 ZBTB7BO15156 539 aaPredicted RBP18.11■□□□□ 0.49
HIF3A-202ENST00000244303 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
HIF3A-202ENST00000244303 THEMISQ8N1K5 641 aaPredicted RBP18.11■□□□□ 0.49
HIF3A-202ENST00000244303 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
HIF3A-202ENST00000244303 ACEP12821 1306 aa18.11■□□□□ 0.49
HIF3A-202ENST00000244303 ARHGAP45Q92619 1136 aa18.11■□□□□ 0.49
HIF3A-202ENST00000244303 CHD1LQ86WJ1 897 aa18.1■□□□□ 0.49
HIF3A-202ENST00000244303 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
HIF3A-202ENST00000244303 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
HIF3A-202ENST00000244303 TWISTNBQ3B726 338 aaPredicted RBP18.09■□□□□ 0.49
HIF3A-202ENST00000244303 FAM83GA6ND36 823 aa18.09■□□□□ 0.49
HIF3A-202ENST00000244303 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
HIF3A-202ENST00000244303 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
HIF3A-202ENST00000244303 CFAP44Q96MT7 982 aa18.09■□□□□ 0.49
HIF3A-202ENST00000244303 NRKQ7Z2Y5 1582 aa18.08■□□□□ 0.49
HIF3A-202ENST00000244303 TOPAZ1Q8N9V7 1692 aa18.08■□□□□ 0.48
HIF3A-202ENST00000244303 C8orf58Q8NAV2 365 aa18.07■□□□□ 0.48
HIF3A-202ENST00000244303 ABCC4O15439 1325 aa18.07■□□□□ 0.48
HIF3A-202ENST00000244303 CHMP4BQ9H444 224 aaKnown RBP18.07■□□□□ 0.48
HIF3A-202ENST00000244303 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
HIF3A-202ENST00000244303 GCC1Q96CN9 775 aa18.06■□□□□ 0.48
HIF3A-202ENST00000244303 USP6P35125 1406 aa18.05■□□□□ 0.48
HIF3A-202ENST00000244303 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-202ENST00000244303 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
HIF3A-202ENST00000244303 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-202ENST00000244303 SIRT2Q8IXJ6 389 aa18.03■□□□□ 0.48
HIF3A-202ENST00000244303 BMP2KLQ5H9B9 411 aa18.03■□□□□ 0.48
HIF3A-202ENST00000244303 AEBP1Q8IUX7 1158 aa18.03■□□□□ 0.48
HIF3A-202ENST00000244303 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
HIF3A-202ENST00000244303 OVOS2Q6IE36 1432 aa18.03■□□□□ 0.48
HIF3A-202ENST00000244303 DIP2AQ14689 1571 aa18.02■□□□□ 0.48
HIF3A-202ENST00000244303 RBM25P49756 843 aaKnown RBP18.02■□□□□ 0.47
HIF3A-202ENST00000244303 EIF4A2Q14240 407 aaKnown RBP18.02■□□□□ 0.47
HIF3A-202ENST00000244303 API5Q9BZZ5 524 aaKnown RBP18.01■□□□□ 0.47
HIF3A-202ENST00000244303 SSH2Q76I76 1423 aa18.01■□□□□ 0.47
HIF3A-202ENST00000244303 NALCNQ8IZF0 1738 aa18.01■□□□□ 0.47
HIF3A-202ENST00000244303 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
HIF3A-202ENST00000244303 SULT6B1Q6IMI4 303 aa18.01■□□□□ 0.47
HIF3A-202ENST00000244303 HSCBQ8IWL3 235 aa18.01■□□□□ 0.47
HIF3A-202ENST00000244303 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
HIF3A-202ENST00000244303 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
HIF3A-202ENST00000244303 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
HIF3A-202ENST00000244303 TTC21AQ8NDW8 1320 aa17.98■□□□□ 0.47
HIF3A-202ENST00000244303 NGDNQ8NEJ9 315 aaKnown RBP17.98■□□□□ 0.47
HIF3A-202ENST00000244303 KCNA6P17658 529 aa17.97■□□□□ 0.47
HIF3A-202ENST00000244303 XRN1Q8IZH2 1706 aaKnown RBP17.97■□□□□ 0.47
HIF3A-202ENST00000244303 KRT24Q2M2I5 525 aa17.97■□□□□ 0.47
HIF3A-202ENST00000244303 KIF24Q5T7B8 1368 aa17.97■□□□□ 0.47
HIF3A-202ENST00000244303 MCM4P33991 863 aa17.96■□□□□ 0.47
HIF3A-202ENST00000244303 HSP90AB2PQ58FF8 381 aa17.96■□□□□ 0.47
HIF3A-202ENST00000244303 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms