RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SOX12O15370 315 aa23.84■■□□□ 1.41
HOXC11-201ENST00000243082 TNNQ9UQP3 1299 aa23.84■■□□□ 1.41
HOXC11-201ENST00000243082 AEBP1Q8IUX7 1158 aa23.83■■□□□ 1.41
HOXC11-201ENST00000243082 RLBP1P12271 317 aa23.83■■□□□ 1.4
HOXC11-201ENST00000243082 ADGRL3Q9HAR2 1447 aa23.82■■□□□ 1.4
HOXC11-201ENST00000243082 SULT6B1Q6IMI4 303 aa23.82■■□□□ 1.4
HOXC11-201ENST00000243082 THUMPD2Q9BTF0 503 aaKnown RBP23.82■■□□□ 1.4
HOXC11-201ENST00000243082 SBNO1A3KN83 1393 aa23.81■■□□□ 1.4
HOXC11-201ENST00000243082 RGPD1P0DJD0 1748 aa23.81■■□□□ 1.4
HOXC11-201ENST00000243082 NLRP6P59044 892 aa23.81■■□□□ 1.4
HOXC11-201ENST00000243082 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
HOXC11-201ENST00000243082 PHF8Q9UPP1 1060 aa23.81■■□□□ 1.4
HOXC11-201ENST00000243082 SSH1Q8WYL5 1049 aa23.8■■□□□ 1.4
HOXC11-201ENST00000243082 DLG5Q8TDM6 1919 aa23.8■■□□□ 1.4
HOXC11-201ENST00000243082 FLT4P35916 1363 aa23.79■■□□□ 1.4
HOXC11-201ENST00000243082 ZNF853P0CG23 659 aa23.79■■□□□ 1.4
HOXC11-201ENST00000243082 LMOD3Q0VAK6 560 aa23.79■■□□□ 1.4
HOXC11-201ENST00000243082 SKAP1Q86WV1 359 aa23.79■■□□□ 1.4
HOXC11-201ENST00000243082 CLUAP1Q96AJ1 413 aa23.79■■□□□ 1.4
HOXC11-201ENST00000243082 SMC4Q9NTJ3 1288 aa23.79■■□□□ 1.4
HOXC11-201ENST00000243082 MS4A1P11836 297 aa23.78■■□□□ 1.4
HOXC11-201ENST00000243082 ZKSCAN2Q63HK3 967 aa23.78■■□□□ 1.4
HOXC11-201ENST00000243082 IFT57Q9NWB7 429 aa23.78■■□□□ 1.4
HOXC11-201ENST00000243082 MARF1Q9Y4F3 1742 aaKnown RBP23.78■■□□□ 1.4
HOXC11-201ENST00000243082 USP54Q70EL1 1684 aa23.78■■□□□ 1.4
HOXC11-201ENST00000243082 LAS1LQ9Y4W2 734 aaKnown RBP23.77■■□□□ 1.4
HOXC11-201ENST00000243082 GNAI1P63096 354 aa23.76■■□□□ 1.39
HOXC11-201ENST00000243082 AAMPQ13685 434 aa23.76■■□□□ 1.39
HOXC11-201ENST00000243082 NUTM2GQ5VZR2 741 aa23.76■■□□□ 1.39
HOXC11-201ENST00000243082 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
HOXC11-201ENST00000243082 ARHGEF10O15013 1369 aa23.75■■□□□ 1.39
HOXC11-201ENST00000243082 FAM83GA6ND36 823 aa23.75■■□□□ 1.39
HOXC11-201ENST00000243082 NWD1Q149M9 1564 aa23.75■■□□□ 1.39
HOXC11-201ENST00000243082 PAK3O75914 559 aaPredicted RBP23.74■■□□□ 1.39
HOXC11-201ENST00000243082 AMPHP49418 695 aa23.74■■□□□ 1.39
HOXC11-201ENST00000243082 IGHDP01880 384 aa23.74■■□□□ 1.39
HOXC11-201ENST00000243082 ALDH1L2Q3SY69 923 aa23.73■■□□□ 1.39
HOXC11-201ENST00000243082 DZIP1LQ8IYY4 767 aaKnown RBP23.73■■□□□ 1.39
HOXC11-201ENST00000243082 CFAP44Q96MT7 982 aa23.73■■□□□ 1.39
HOXC11-201ENST00000243082 MBIPQ9NS73 344 aa23.73■■□□□ 1.39
HOXC11-201ENST00000243082 ESCO1Q5FWF5 840 aa23.72■■□□□ 1.39
HOXC11-201ENST00000243082 TRIM27P14373 513 aa23.72■■□□□ 1.39
HOXC11-201ENST00000243082 DCTN1Q14203 1278 aa23.72■■□□□ 1.39
HOXC11-201ENST00000243082 MVPQ14764 893 aaKnown RBP23.72■■□□□ 1.39
HOXC11-201ENST00000243082 ZNF428Q96B54 188 aa23.72■■□□□ 1.39
HOXC11-201ENST00000243082 KIF24Q5T7B8 1368 aa23.72■■□□□ 1.39
HOXC11-201ENST00000243082 NOB1Q9ULX3 412 aaKnown RBP23.71■■□□□ 1.39
HOXC11-201ENST00000243082 VAMP4O75379 141 aa23.71■■□□□ 1.39
HOXC11-201ENST00000243082 ATF7IPQ6VMQ6 1270 aa23.7■■□□□ 1.38
HOXC11-201ENST00000243082 C14orf37Q86TY3 774 aa23.7■■□□□ 1.38
HOXC11-201ENST00000243082 EYA1Q99502 592 aa23.7■■□□□ 1.38
HOXC11-201ENST00000243082 KDRP35968 1356 aa23.7■■□□□ 1.38
HOXC11-201ENST00000243082 IGSF1Q8N6C5 1336 aa23.7■■□□□ 1.38
HOXC11-201ENST00000243082 PDE4AP27815 886 aa23.69■■□□□ 1.38
HOXC11-201ENST00000243082 HOXC9P31274 260 aa23.69■■□□□ 1.38
HOXC11-201ENST00000243082 FTSJ3Q8IY81 847 aaKnown RBP23.69■■□□□ 1.38
HOXC11-201ENST00000243082 BRPF1P55201 1214 aaPredicted RBP23.69■■□□□ 1.38
HOXC11-201ENST00000243082 TSPYL6Q8N831 410 aa23.69■■□□□ 1.38
HOXC11-201ENST00000243082 PCDHB15Q9Y5E8 787 aa23.68■■□□□ 1.38
HOXC11-201ENST00000243082 KIF16BQ96L93 1317 aa23.68■■□□□ 1.38
HOXC11-201ENST00000243082 PSME1Q06323 249 aa23.67■■□□□ 1.38
HOXC11-201ENST00000243082 BACH2Q9BYV9 841 aa23.67■■□□□ 1.38
HOXC11-201ENST00000243082 MSH5O43196 834 aa23.66■■□□□ 1.38
HOXC11-201ENST00000243082 PROSER2Q86WR7 435 aaPredicted RBP23.66■■□□□ 1.38
HOXC11-201ENST00000243082 ORAI2Q96SN7 254 aa23.66■■□□□ 1.38
HOXC11-201ENST00000243082 IPO8O15397 1037 aaKnown RBP23.65■■□□□ 1.38
HOXC11-201ENST00000243082 MCM10Q7L590 875 aa23.64■■□□□ 1.37
HOXC11-201ENST00000243082 C8orf58Q8NAV2 365 aa23.64■■□□□ 1.37
HOXC11-201ENST00000243082 MTHFSDQ2M296 383 aaKnown RBP23.63■■□□□ 1.37
HOXC11-201ENST00000243082 MRPL50Q8N5N7 158 aaKnown RBP23.63■■□□□ 1.37
HOXC11-201ENST00000243082 ELL2O00472 640 aaPredicted RBP23.62■■□□□ 1.37
HOXC11-201ENST00000243082 TWISTNBQ3B726 338 aaPredicted RBP23.62■■□□□ 1.37
HOXC11-201ENST00000243082 CHL1O00533 1208 aa23.62■■□□□ 1.37
HOXC11-201ENST00000243082 RTL1A6NKG5 1358 aa23.62■■□□□ 1.37
HOXC11-201ENST00000243082 NFAT5O94916 1531 aa23.61■■□□□ 1.37
HOXC11-201ENST00000243082 DDX19BQ9UMR2 479 aa23.61■■□□□ 1.37
HOXC11-201ENST00000243082 FOXO3O43524 673 aa23.6■■□□□ 1.37
HOXC11-201ENST00000243082 TMEM57Q8N5G2 664 aa23.6■■□□□ 1.37
HOXC11-201ENST00000243082 CRB1P82279 1406 aa23.6■■□□□ 1.37
HOXC11-201ENST00000243082 ITPRIPQ8IWB1 547 aa23.6■■□□□ 1.37
HOXC11-201ENST00000243082 C19orf44Q9H6X5 657 aa23.6■■□□□ 1.37
HOXC11-201ENST00000243082 RGS3P49796 1198 aa23.58■■□□□ 1.37
HOXC11-201ENST00000243082 IP6K1Q92551 441 aa23.58■■□□□ 1.37
HOXC11-201ENST00000243082 ARHGAP45Q92619 1136 aa23.58■■□□□ 1.37
HOXC11-201ENST00000243082 LTN1O94822 1766 aa23.58■■□□□ 1.36
HOXC11-201ENST00000243082 C1orf167Q5SNV9 1468 aa23.57■■□□□ 1.36
HOXC11-201ENST00000243082 KCNH5Q8NCM2 988 aa23.57■■□□□ 1.36
HOXC11-201ENST00000243082 GAS2L2Q8NHY3 880 aa23.57■■□□□ 1.36
HOXC11-201ENST00000243082 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
HOXC11-201ENST00000243082 RWDD1Q9H446 243 aaPredicted RBP23.57■■□□□ 1.36
HOXC11-201ENST00000243082 XPCQ01831 940 aaPredicted RBP23.56■■□□□ 1.36
HOXC11-201ENST00000243082 ZBTB40Q9NUA8 1239 aa23.54■■□□□ 1.36
HOXC11-201ENST00000243082 RTF1Q92541 710 aaKnown RBP23.54■■□□□ 1.36
HOXC11-201ENST00000243082 KIAA0232Q92628 1395 aa23.53■■□□□ 1.36
HOXC11-201ENST00000243082 KRT24Q2M2I5 525 aa23.53■■□□□ 1.36
HOXC11-201ENST00000243082 STRCP1A6NGW2 1772 aa23.53■■□□□ 1.36
HOXC11-201ENST00000243082 TMEM94Q12767 1356 aa23.52■■□□□ 1.36
HOXC11-201ENST00000243082 HTATSF1O43719 755 aaKnown RBP23.52■■□□□ 1.36
HOXC11-201ENST00000243082 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
HOXC11-201ENST00000243082 KRT28Q7Z3Y7 464 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms