RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 NUTM2GQ5VZR2 741 aa26.53■■□□□ 1.84
SNX3-201ENST00000230085 C20orf194Q5TEA3 1177 aa26.52■■□□□ 1.84
SNX3-201ENST00000230085 ALS2Q96Q42 1657 aa26.51■■□□□ 1.83
SNX3-201ENST00000230085 PLEKHG5O94827 1062 aa26.51■■□□□ 1.83
SNX3-201ENST00000230085 KNSTRNQ9Y448 316 aa26.51■■□□□ 1.83
SNX3-201ENST00000230085 WDR43Q15061 677 aaKnown RBP eCLIP26.51■■□□□ 1.83
SNX3-201ENST00000230085 NSD3Q9BZ95 1437 aa26.5■■□□□ 1.83
SNX3-201ENST00000230085 PNPLA6Q8IY17 1366 aa26.5■■□□□ 1.83
SNX3-201ENST00000230085 TTC21AQ8NDW8 1320 aa26.5■■□□□ 1.83
SNX3-201ENST00000230085 NFKBIBQ15653 356 aa26.5■■□□□ 1.83
SNX3-201ENST00000230085 JCADQ9P266 1359 aa26.5■■□□□ 1.83
SNX3-201ENST00000230085 NME9Q86XW9 330 aa26.49■■□□□ 1.83
SNX3-201ENST00000230085 ARHGEF10O15013 1369 aa26.48■■□□□ 1.83
SNX3-201ENST00000230085 ZRANB1Q9UGI0 708 aa26.48■■□□□ 1.83
SNX3-201ENST00000230085 NLRP6P59044 892 aa26.47■■□□□ 1.83
SNX3-201ENST00000230085 PIK3C2AO00443 1686 aa26.46■■□□□ 1.83
SNX3-201ENST00000230085 CABLES1Q8TDN4 633 aa26.46■■□□□ 1.83
SNX3-201ENST00000230085 IL27Q8NEV9 243 aa26.46■■□□□ 1.83
SNX3-201ENST00000230085 FYB1O15117 783 aa26.45■■□□□ 1.82
SNX3-201ENST00000230085 SHPRHQ149N8 1683 aa26.44■■□□□ 1.82
SNX3-201ENST00000230085 AAMPQ13685 434 aa26.43■■□□□ 1.82
SNX3-201ENST00000230085 GGNBP2Q9H3C7 697 aa26.43■■□□□ 1.82
SNX3-201ENST00000230085 CGNL1Q0VF96 1302 aa26.42■■□□□ 1.82
SNX3-201ENST00000230085 COL22A1Q8NFW1 1626 aaPredicted RBP26.41■■□□□ 1.82
SNX3-201ENST00000230085 NUTM2BA6NNL0 878 aaPredicted RBP26.41■■□□□ 1.82
SNX3-201ENST00000230085 NUTM2EB1AL46 878 aaPredicted RBP26.41■■□□□ 1.82
SNX3-201ENST00000230085 NUTM2AQ8IVF1 878 aaPredicted RBP26.41■■□□□ 1.82
SNX3-201ENST00000230085 E9PSI1 815 aa26.4■■□□□ 1.82
SNX3-201ENST00000230085 PDE3AQ14432 1141 aa26.4■■□□□ 1.82
SNX3-201ENST00000230085 DAXXQ9UER7 740 aaPredicted RBP26.4■■□□□ 1.82
SNX3-201ENST00000230085 MED1Q15648 1581 aaPredicted RBP26.39■■□□□ 1.81
SNX3-201ENST00000230085 SPATA31A6Q5VVP1 1343 aa26.38■■□□□ 1.81
SNX3-201ENST00000230085 USP31Q70CQ4 1352 aa26.38■■□□□ 1.81
SNX3-201ENST00000230085 MARF1Q9Y4F3 1742 aaKnown RBP26.37■■□□□ 1.81
SNX3-201ENST00000230085 KIF20BQ96Q89 1820 aa26.37■■□□□ 1.81
SNX3-201ENST00000230085 USP19O94966 1318 aa26.36■■□□□ 1.81
SNX3-201ENST00000230085 HAP1P54257 671 aaPredicted RBP26.36■■□□□ 1.81
SNX3-201ENST00000230085 COG3Q96JB2 828 aa26.36■■□□□ 1.81
SNX3-201ENST00000230085 MAPK8IP3Q9UPT6 1336 aa26.36■■□□□ 1.81
SNX3-201ENST00000230085 SOX12O15370 315 aa26.35■■□□□ 1.81
SNX3-201ENST00000230085 OVOS2A0A0J9YW53 1432 aa26.35■■□□□ 1.81
SNX3-201ENST00000230085 OVOS2Q6IE36 1432 aa26.35■■□□□ 1.81
SNX3-201ENST00000230085 CRYBG1Q9Y4K1 1723 aa26.35■■□□□ 1.81
SNX3-201ENST00000230085 GCP02774 474 aa26.35■■□□□ 1.81
SNX3-201ENST00000230085 SKAP1Q86WV1 359 aa26.33■■□□□ 1.81
SNX3-201ENST00000230085 ABCA3Q99758 1704 aa26.33■■□□□ 1.81
SNX3-201ENST00000230085 ADAMTS2O95450 1211 aa26.33■■□□□ 1.8
SNX3-201ENST00000230085 NCBP3Q53F19 620 aaKnown RBP26.33■■□□□ 1.8
SNX3-201ENST00000230085 LRP6O75581 1613 aa26.32■■□□□ 1.8
SNX3-201ENST00000230085 PHRF1Q9P1Y6 1649 aaKnown RBP26.31■■□□□ 1.8
SNX3-201ENST00000230085 FBLN1P23142 703 aa26.31■■□□□ 1.8
SNX3-201ENST00000230085 USP54Q70EL1 1684 aa26.31■■□□□ 1.8
SNX3-201ENST00000230085 ZC3H6P61129 1189 aaKnown RBP26.3■■□□□ 1.8
SNX3-201ENST00000230085 SLIT3O75094 1523 aa26.3■■□□□ 1.8
SNX3-201ENST00000230085 KCNH5Q8NCM2 988 aa26.29■■□□□ 1.8
SNX3-201ENST00000230085 NSD2O96028 1365 aa26.28■■□□□ 1.8
SNX3-201ENST00000230085 FRAT1Q92837 279 aaPredicted RBP26.28■■□□□ 1.8
SNX3-201ENST00000230085 TNNT2P45379 298 aaPredicted RBP26.27■■□□□ 1.8
SNX3-201ENST00000230085 MORC1Q86VD1 984 aa26.25■■□□□ 1.79
SNX3-201ENST00000230085 KIAA0232Q92628 1395 aa26.25■■□□□ 1.79
SNX3-201ENST00000230085 ANKRD26Q9UPS8 1709 aa26.25■■□□□ 1.79
SNX3-201ENST00000230085 FAM83GA6ND36 823 aa26.24■■□□□ 1.79
SNX3-201ENST00000230085 MEX3CQ5U5Q3 659 aaKnown RBP26.24■■□□□ 1.79
SNX3-201ENST00000230085 NFAT5O94916 1531 aa26.24■■□□□ 1.79
SNX3-201ENST00000230085 ZBTB7CA1YPR0 619 aa26.23■■□□□ 1.79
SNX3-201ENST00000230085 CHRNA2Q15822 529 aa26.23■■□□□ 1.79
SNX3-201ENST00000230085 C8orf37Q96NL8 207 aa26.23■■□□□ 1.79
SNX3-201ENST00000230085 ANO8Q9HCE9 1232 aaPredicted RBP26.23■■□□□ 1.79
SNX3-201ENST00000230085 PRDM11Q9NQV5 511 aa26.23■■□□□ 1.79
SNX3-201ENST00000230085 APAF1O14727 1248 aa26.22■■□□□ 1.79
SNX3-201ENST00000230085 RRS1Q15050 365 aaKnown RBP26.22■■□□□ 1.79
SNX3-201ENST00000230085 ARHGEF25Q86VW2 580 aa26.22■■□□□ 1.79
SNX3-201ENST00000230085 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
SNX3-201ENST00000230085 SPINK5Q9NQ38 1064 aaPredicted RBP26.22■■□□□ 1.79
SNX3-201ENST00000230085 CLUAP1Q96AJ1 413 aa26.21■■□□□ 1.79
SNX3-201ENST00000230085 CPDO75976 1380 aa26.2■■□□□ 1.79
SNX3-201ENST00000230085 SLC4A3P48751 1232 aa26.19■■□□□ 1.78
SNX3-201ENST00000230085 NGLY1Q96IV0 654 aa26.19■■□□□ 1.78
SNX3-201ENST00000230085 BRPF3Q9ULD4 1205 aa26.18■■□□□ 1.78
SNX3-201ENST00000230085 MAP3K19Q56UN5 1328 aa26.18■■□□□ 1.78
SNX3-201ENST00000230085 BECN1Q14457 450 aa26.18■■□□□ 1.78
SNX3-201ENST00000230085 FRAT2O75474 233 aaPredicted RBP26.17■■□□□ 1.78
SNX3-201ENST00000230085 MAP2P11137 1827 aaKnown RBP26.17■■□□□ 1.78
SNX3-201ENST00000230085 LTN1O94822 1766 aa26.16■■□□□ 1.78
SNX3-201ENST00000230085 BCAR3O75815 825 aa26.16■■□□□ 1.78
SNX3-201ENST00000230085 IGHDP01880 384 aa26.16■■□□□ 1.78
SNX3-201ENST00000230085 FAM43AQ8N2R8 423 aa26.16■■□□□ 1.78
SNX3-201ENST00000230085 RGS3P49796 1198 aa26.15■■□□□ 1.78
SNX3-201ENST00000230085 EMILIN1Q9Y6C2 1016 aa26.15■■□□□ 1.78
SNX3-201ENST00000230085 AATKQ6ZMQ8 1374 aa26.15■■□□□ 1.78
SNX3-201ENST00000230085 CCDC27Q2M243 656 aa26.15■■□□□ 1.78
SNX3-201ENST00000230085 POLKQ9UBT6 870 aa26.15■■□□□ 1.78
SNX3-201ENST00000230085 AXIN2Q9Y2T1 843 aa26.15■■□□□ 1.78
SNX3-201ENST00000230085 WWC1Q8IX03 1113 aa26.14■■□□□ 1.78
SNX3-201ENST00000230085 BTG4Q9NY30 223 aa26.13■■□□□ 1.77
SNX3-201ENST00000230085 AMPHP49418 695 aa26.12■■□□□ 1.77
SNX3-201ENST00000230085 FNBP4Q8N3X1 1017 aaPredicted RBP26.12■■□□□ 1.77
SNX3-201ENST00000230085 COL14A1Q05707 1796 aaKnown RBP26.12■■□□□ 1.77
SNX3-201ENST00000230085 PRKCSHP14314 528 aaPredicted RBP26.12■■□□□ 1.77
SNX3-201ENST00000230085 WDR63Q8IWG1 891 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms