RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 C16orf71Q8IYS4 520 aaPredicted RBP12.72□□□□□ -0.37
FOXN1-201ENST00000226247 RNF17Q9BXT8 1623 aaKnown RBP12.72□□□□□ -0.37
FOXN1-201ENST00000226247 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
FOXN1-201ENST00000226247 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
FOXN1-201ENST00000226247 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
FOXN1-201ENST00000226247 ARAP3Q8WWN8 1544 aa12.71□□□□□ -0.37
FOXN1-201ENST00000226247 KIF16BQ96L93 1317 aa12.71□□□□□ -0.37
FOXN1-201ENST00000226247 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
FOXN1-201ENST00000226247 ZFYVE16Q7Z3T8 1539 aa12.71□□□□□ -0.37
FOXN1-201ENST00000226247 HMOX1P09601 288 aa12.71□□□□□ -0.37
FOXN1-201ENST00000226247 NOL8Q76FK4 1167 aaKnown RBP12.71□□□□□ -0.37
FOXN1-201ENST00000226247 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
FOXN1-201ENST00000226247 ZGPATQ8N5A5 531 aaKnown RBP12.71□□□□□ -0.37
FOXN1-201ENST00000226247 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.38
FOXN1-201ENST00000226247 PDIA4P13667 645 aaKnown RBP12.71□□□□□ -0.38
FOXN1-201ENST00000226247 PTMSP20962 102 aa12.71□□□□□ -0.38
FOXN1-201ENST00000226247 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
FOXN1-201ENST00000226247 CT47B1P0C2W7 299 aaPredicted RBP12.7□□□□□ -0.38
FOXN1-201ENST00000226247 TSPYL6Q8N831 410 aa12.7□□□□□ -0.38
FOXN1-201ENST00000226247 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
FOXN1-201ENST00000226247 NEO1Q92859 1461 aa12.69□□□□□ -0.38
FOXN1-201ENST00000226247 SYCE3A1L190 88 aa12.69□□□□□ -0.38
FOXN1-201ENST00000226247 CDC45O75419 566 aa12.69□□□□□ -0.38
FOXN1-201ENST00000226247 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
FOXN1-201ENST00000226247 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
FOXN1-201ENST00000226247 CHMP4AQ9BY43 222 aa12.69□□□□□ -0.38
FOXN1-201ENST00000226247 NOS1P29475 1434 aa12.69□□□□□ -0.38
FOXN1-201ENST00000226247 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
FOXN1-201ENST00000226247 SIRT2Q8IXJ6 389 aa12.68□□□□□ -0.38
FOXN1-201ENST00000226247 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
FOXN1-201ENST00000226247 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
FOXN1-201ENST00000226247 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
FOXN1-201ENST00000226247 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
FOXN1-201ENST00000226247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.68□□□□□ -0.38
FOXN1-201ENST00000226247 OTUD7AQ8TE49 926 aaPredicted RBP12.68□□□□□ -0.38
FOXN1-201ENST00000226247 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
FOXN1-201ENST00000226247 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
FOXN1-201ENST00000226247 IQSEC2Q5JU85 1478 aa12.68□□□□□ -0.38
FOXN1-201ENST00000226247 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
FOXN1-201ENST00000226247 CLTCL1P53675 1640 aa12.67□□□□□ -0.38
FOXN1-201ENST00000226247 CEP152O94986 1710 aa12.67□□□□□ -0.38
FOXN1-201ENST00000226247 NSFL1CQ9UNZ2 370 aaKnown RBP12.67□□□□□ -0.38
FOXN1-201ENST00000226247 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
FOXN1-201ENST00000226247 GSPT1P15170 499 aaKnown RBP12.66□□□□□ -0.38
FOXN1-201ENST00000226247 NUCB2P80303 420 aa12.66□□□□□ -0.38
FOXN1-201ENST00000226247 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
FOXN1-201ENST00000226247 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
FOXN1-201ENST00000226247 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
FOXN1-201ENST00000226247 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
FOXN1-201ENST00000226247 C17orf53Q8N3J3 647 aaPredicted RBP12.66□□□□□ -0.38
FOXN1-201ENST00000226247 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
FOXN1-201ENST00000226247 PPIP5K1Q6PFW1 1433 aa12.66□□□□□ -0.38
FOXN1-201ENST00000226247 KIF13AQ9H1H9 1805 aa12.66□□□□□ -0.38
FOXN1-201ENST00000226247 GPT2Q8TD30 523 aa12.65□□□□□ -0.38
FOXN1-201ENST00000226247 RABEP1Q15276 862 aa12.65□□□□□ -0.38
FOXN1-201ENST00000226247 ZNF771Q7L3S4 317 aaPredicted RBP12.65□□□□□ -0.38
FOXN1-201ENST00000226247 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
FOXN1-201ENST00000226247 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.39
FOXN1-201ENST00000226247 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.39
FOXN1-201ENST00000226247 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
FOXN1-201ENST00000226247 TRPM2O94759 1503 aa12.64□□□□□ -0.39
FOXN1-201ENST00000226247 ZNF445P59923 1031 aa12.64□□□□□ -0.39
FOXN1-201ENST00000226247 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
FOXN1-201ENST00000226247 TXNDC2Q86VQ3 553 aa12.64□□□□□ -0.39
FOXN1-201ENST00000226247 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
FOXN1-201ENST00000226247 TMEM63CQ9P1W3 806 aa12.64□□□□□ -0.39
FOXN1-201ENST00000226247 FYB1O15117 783 aa12.63□□□□□ -0.39
FOXN1-201ENST00000226247 TRERF1Q96PN7 1200 aa12.63□□□□□ -0.39
FOXN1-201ENST00000226247 VAMP4O75379 141 aa12.63□□□□□ -0.39
FOXN1-201ENST00000226247 SHPRHQ149N8 1683 aa12.63□□□□□ -0.39
FOXN1-201ENST00000226247 SPHKAPQ2M3C7 1700 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 ST18O60284 1047 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 DCTN1Q14203 1278 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 ALDH1L2Q3SY69 923 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 USP26Q9BXU7 913 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 ZKSCAN5Q9Y2L8 839 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
FOXN1-201ENST00000226247 MLH3Q9UHC1 1453 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 ABCC11Q96J66 1382 aa12.62□□□□□ -0.39
FOXN1-201ENST00000226247 NEK4P51957 841 aa12.61□□□□□ -0.39
FOXN1-201ENST00000226247 CFAP74Q9C0B2 1584 aa12.61□□□□□ -0.39
FOXN1-201ENST00000226247 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
FOXN1-201ENST00000226247 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
FOXN1-201ENST00000226247 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
FOXN1-201ENST00000226247 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 MAP3K4Q9Y6R4 1608 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
FOXN1-201ENST00000226247 SDSP20132 328 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 DMTNQ08495 405 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 INTS3Q68E01 1043 aaKnown RBP12.6□□□□□ -0.39
FOXN1-201ENST00000226247 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 CCDC94Q9BW85 323 aaPredicted RBP12.6□□□□□ -0.39
FOXN1-201ENST00000226247 HECW2Q9P2P5 1572 aa12.6□□□□□ -0.39
FOXN1-201ENST00000226247 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
FOXN1-201ENST00000226247 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
FOXN1-201ENST00000226247 CERS3Q8IU89 383 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms