RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
SFXN3-201ENST00000224807 NOS1P29475 1434 aa17.64■□□□□ 0.42
SFXN3-201ENST00000224807 FAM83GA6ND36 823 aa17.64■□□□□ 0.41
SFXN3-201ENST00000224807 DDIT3P35638 169 aa17.64■□□□□ 0.41
SFXN3-201ENST00000224807 GSPT1P15170 499 aaKnown RBP17.64■□□□□ 0.41
SFXN3-201ENST00000224807 KRT24Q2M2I5 525 aa17.64■□□□□ 0.41
SFXN3-201ENST00000224807 PODXL2Q9NZ53 605 aa17.64■□□□□ 0.41
SFXN3-201ENST00000224807 ZC3H13Q5T200 1668 aaKnown RBP17.63■□□□□ 0.41
SFXN3-201ENST00000224807 QRICH2Q9H0J4 1663 aa17.63■□□□□ 0.41
SFXN3-201ENST00000224807 GPT2Q8TD30 523 aa17.63■□□□□ 0.41
SFXN3-201ENST00000224807 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
SFXN3-201ENST00000224807 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
SFXN3-201ENST00000224807 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
SFXN3-201ENST00000224807 SIRT2Q8IXJ6 389 aa17.63■□□□□ 0.41
SFXN3-201ENST00000224807 TMEM63CQ9P1W3 806 aa17.63■□□□□ 0.41
SFXN3-201ENST00000224807 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
SFXN3-201ENST00000224807 NEK4P51957 841 aa17.62■□□□□ 0.41
SFXN3-201ENST00000224807 CBX1P83916 185 aa17.62■□□□□ 0.41
SFXN3-201ENST00000224807 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
SFXN3-201ENST00000224807 LMBRD1Q9NUN5 540 aa17.62■□□□□ 0.41
SFXN3-201ENST00000224807 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
SFXN3-201ENST00000224807 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
SFXN3-201ENST00000224807 SETBP1Q9Y6X0 1596 aa17.62■□□□□ 0.41
SFXN3-201ENST00000224807 EFCAB6Q5THR3 1501 aa17.6■□□□□ 0.41
SFXN3-201ENST00000224807 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
SFXN3-201ENST00000224807 PPP1R9BQ96SB3 815 aa17.6■□□□□ 0.41
SFXN3-201ENST00000224807 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
SFXN3-201ENST00000224807 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
SFXN3-201ENST00000224807 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
SFXN3-201ENST00000224807 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
SFXN3-201ENST00000224807 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
SFXN3-201ENST00000224807 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.41
SFXN3-201ENST00000224807 NUCB2P80303 420 aa17.58■□□□□ 0.4
SFXN3-201ENST00000224807 TTC12Q9H892 705 aaPredicted RBP17.58■□□□□ 0.4
SFXN3-201ENST00000224807 ADGRL1O94910 1474 aa17.58■□□□□ 0.4
SFXN3-201ENST00000224807 PPRC1Q5VV67 1664 aaKnown RBP17.58■□□□□ 0.4
SFXN3-201ENST00000224807 CD109Q6YHK3 1445 aa17.58■□□□□ 0.4
SFXN3-201ENST00000224807 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
SFXN3-201ENST00000224807 ST18O60284 1047 aa17.58■□□□□ 0.4
SFXN3-201ENST00000224807 NECTIN2Q92692 538 aa17.58■□□□□ 0.4
SFXN3-201ENST00000224807 ADGRB1O14514 1584 aa17.58■□□□□ 0.4
SFXN3-201ENST00000224807 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
SFXN3-201ENST00000224807 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.57■□□□□ 0.4
SFXN3-201ENST00000224807 RILPL2Q969X0 211 aa17.57■□□□□ 0.4
SFXN3-201ENST00000224807 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
SFXN3-201ENST00000224807 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.57■□□□□ 0.4
SFXN3-201ENST00000224807 EVC2Q86UK5 1308 aa17.57■□□□□ 0.4
SFXN3-201ENST00000224807 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
SFXN3-201ENST00000224807 C8orf58Q8NAV2 365 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 USP25Q9UHP3 1055 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 RABEP1Q15276 862 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
SFXN3-201ENST00000224807 PLEKHM2Q8IWE5 1019 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 SDSP20132 328 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 ZKSCAN5Q9Y2L8 839 aa17.56■□□□□ 0.4
SFXN3-201ENST00000224807 FANCAO15360 1455 aa17.55■□□□□ 0.4
SFXN3-201ENST00000224807 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
SFXN3-201ENST00000224807 PLEKHF1Q96S99 279 aa17.55■□□□□ 0.4
SFXN3-201ENST00000224807 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
SFXN3-201ENST00000224807 NOL7Q9UMY1 257 aaKnown RBP17.55■□□□□ 0.4
SFXN3-201ENST00000224807 PTMSP20962 102 aa17.55■□□□□ 0.4
SFXN3-201ENST00000224807 ANO2Q9NQ90 1003 aa17.54■□□□□ 0.4
SFXN3-201ENST00000224807 CFAP65Q6ZU64 1925 aaKnown RBP17.54■□□□□ 0.4
SFXN3-201ENST00000224807 ANKRD36BQ8N2N9 1353 aa17.54■□□□□ 0.4
SFXN3-201ENST00000224807 CASC1Q6TDU7 716 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 SPC24Q8NBT2 197 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 FYB1O15117 783 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 MAP4K4O95819 1239 aaPredicted RBP17.53■□□□□ 0.4
SFXN3-201ENST00000224807 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 CABP1Q9NZU7 370 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
SFXN3-201ENST00000224807 PPLO60437 1756 aa17.52■□□□□ 0.4
SFXN3-201ENST00000224807 NSD2O96028 1365 aa17.52■□□□□ 0.4
SFXN3-201ENST00000224807 GADD45BO75293 160 aaPredicted RBP17.52■□□□□ 0.4
SFXN3-201ENST00000224807 VAMP4O75379 141 aa17.52■□□□□ 0.4
SFXN3-201ENST00000224807 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
SFXN3-201ENST00000224807 USP26Q9BXU7 913 aa17.52■□□□□ 0.4
SFXN3-201ENST00000224807 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.52■□□□□ 0.4
SFXN3-201ENST00000224807 ABCA9Q8IUA7 1624 aa17.52■□□□□ 0.4
SFXN3-201ENST00000224807 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.39
SFXN3-201ENST00000224807 EXOC6BQ9Y2D4 811 aa17.52■□□□□ 0.39
SFXN3-201ENST00000224807 TULP4Q9NRJ4 1543 aa17.51■□□□□ 0.39
SFXN3-201ENST00000224807 RRS1Q15050 365 aaKnown RBP17.51■□□□□ 0.39
SFXN3-201ENST00000224807 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
SFXN3-201ENST00000224807 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
SFXN3-201ENST00000224807 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
SFXN3-201ENST00000224807 F6X3S4 739 aa17.5■□□□□ 0.39
SFXN3-201ENST00000224807 ZNF445P59923 1031 aa17.5■□□□□ 0.39
SFXN3-201ENST00000224807 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
SFXN3-201ENST00000224807 TTC22Q5TAA0 569 aa17.5■□□□□ 0.39
SFXN3-201ENST00000224807 PRAM1Q96QH2 718 aa17.5■□□□□ 0.39
SFXN3-201ENST00000224807 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
SFXN3-201ENST00000224807 ABCC11Q96J66 1382 aa17.49■□□□□ 0.39
SFXN3-201ENST00000224807 LRSAM1Q6UWE0 723 aa17.49■□□□□ 0.39
SFXN3-201ENST00000224807 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
SFXN3-201ENST00000224807 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms