RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CCDC73Q6ZRK6 1079 aa22.19■■□□□ 1.14
CLIP2-201ENST00000223398 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
CLIP2-201ENST00000223398 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.18■■□□□ 1.14
CLIP2-201ENST00000223398 AAMPQ13685 434 aa22.18■■□□□ 1.14
CLIP2-201ENST00000223398 STARD3NLO95772 234 aa22.17■■□□□ 1.14
CLIP2-201ENST00000223398 SRGAP3O43295 1099 aa22.17■■□□□ 1.14
CLIP2-201ENST00000223398 CHMP5Q9NZZ3 219 aa22.17■■□□□ 1.14
CLIP2-201ENST00000223398 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
CLIP2-201ENST00000223398 FCHSD2O94868 740 aa22.17■■□□□ 1.14
CLIP2-201ENST00000223398 LRRCC1Q9C099 1032 aa22.17■■□□□ 1.14
CLIP2-201ENST00000223398 ZSCAN29Q8IWY8 852 aaPredicted RBP22.16■■□□□ 1.14
CLIP2-201ENST00000223398 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
CLIP2-201ENST00000223398 AACSQ86V21 672 aa22.16■■□□□ 1.14
CLIP2-201ENST00000223398 NEK4P51957 841 aa22.15■■□□□ 1.14
CLIP2-201ENST00000223398 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
CLIP2-201ENST00000223398 IPO7O95373 1038 aaKnown RBP22.15■■□□□ 1.14
CLIP2-201ENST00000223398 PCF11O94913 1555 aaKnown RBP22.14■■□□□ 1.14
CLIP2-201ENST00000223398 SASS6Q6UVJ0 657 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 WDR63Q8IWG1 891 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 GOLGA6L1Q8N7Z2 621 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 ZNF592Q92610 1267 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 IL1RAPL2Q9NP60 686 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 KIF14Q15058 1648 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 HIP1O00291 1037 aa22.14■■□□□ 1.13
CLIP2-201ENST00000223398 ATF7IPQ6VMQ6 1270 aa22.13■■□□□ 1.13
CLIP2-201ENST00000223398 CEP126Q9P2H0 1117 aa22.13■■□□□ 1.13
CLIP2-201ENST00000223398 GCC1Q96CN9 775 aa22.13■■□□□ 1.13
CLIP2-201ENST00000223398 RAI14Q9P0K7 980 aa22.13■■□□□ 1.13
CLIP2-201ENST00000223398 R3HCC1Q9Y3T6 440 aaKnown RBP22.13■■□□□ 1.13
CLIP2-201ENST00000223398 ZPR1O75312 459 aa22.12■■□□□ 1.13
CLIP2-201ENST00000223398 TMPOP42166 694 aaKnown RBP22.12■■□□□ 1.13
CLIP2-201ENST00000223398 NUCB2P80303 420 aa22.12■■□□□ 1.13
CLIP2-201ENST00000223398 STK3Q13188 491 aa22.12■■□□□ 1.13
CLIP2-201ENST00000223398 NAIPQ13075 1403 aa22.12■■□□□ 1.13
CLIP2-201ENST00000223398 TMEM132AQ24JP5 1023 aa22.12■■□□□ 1.13
CLIP2-201ENST00000223398 DENND4BO75064 1496 aaPredicted RBP22.12■■□□□ 1.13
CLIP2-201ENST00000223398 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
CLIP2-201ENST00000223398 IGHMBP2P38935 993 aaKnown RBP22.11■■□□□ 1.13
CLIP2-201ENST00000223398 NACAP1Q9BZK3 213 aa22.11■■□□□ 1.13
CLIP2-201ENST00000223398 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.11■■□□□ 1.13
CLIP2-201ENST00000223398 WASLO00401 505 aaPredicted RBP22.11■■□□□ 1.13
CLIP2-201ENST00000223398 KRT28Q7Z3Y7 464 aa22.11■■□□□ 1.13
CLIP2-201ENST00000223398 CCDC184Q52MB2 194 aa22.1■■□□□ 1.13
CLIP2-201ENST00000223398 FANCAO15360 1455 aa22.1■■□□□ 1.13
CLIP2-201ENST00000223398 ABCC5O15440 1437 aa22.1■■□□□ 1.13
CLIP2-201ENST00000223398 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
CLIP2-201ENST00000223398 DUSP27Q5VZP5 1158 aa22.09■■□□□ 1.13
CLIP2-201ENST00000223398 PDE3AQ14432 1141 aa22.09■■□□□ 1.13
CLIP2-201ENST00000223398 CEBPZQ03701 1054 aaKnown RBP22.09■■□□□ 1.13
CLIP2-201ENST00000223398 NUP133Q8WUM0 1156 aa22.09■■□□□ 1.13
CLIP2-201ENST00000223398 ZNF219Q9P2Y4 722 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-201ENST00000223398 SDF4Q9BRK5 362 aa22.09■■□□□ 1.13
CLIP2-201ENST00000223398 AKNAQ7Z591 1439 aa22.09■■□□□ 1.13
CLIP2-201ENST00000223398 LRP2BPQ9P2M1 347 aa22.08■■□□□ 1.13
CLIP2-201ENST00000223398 ABCF2Q9UG63 623 aa22.08■■□□□ 1.12
CLIP2-201ENST00000223398 CHRNA2Q15822 529 aa22.07■■□□□ 1.12
CLIP2-201ENST00000223398 IDH1O75874 414 aaKnown RBP22.07■■□□□ 1.12
CLIP2-201ENST00000223398 MYD88Q99836 296 aa22.06■■□□□ 1.12
CLIP2-201ENST00000223398 CDK5RAP3Q96JB5 506 aa22.06■■□□□ 1.12
CLIP2-201ENST00000223398 NAP1L1P55209 391 aaKnown RBP22.06■■□□□ 1.12
CLIP2-201ENST00000223398 MVPQ14764 893 aaKnown RBP22.06■■□□□ 1.12
CLIP2-201ENST00000223398 EXOC5O00471 708 aa22.05■■□□□ 1.12
CLIP2-201ENST00000223398 EPS15P42566 896 aa22.05■■□□□ 1.12
CLIP2-201ENST00000223398 TDO2P48775 406 aa22.05■■□□□ 1.12
CLIP2-201ENST00000223398 METTL24Q5JXM2 366 aa22.05■■□□□ 1.12
CLIP2-201ENST00000223398 ZNF652Q9Y2D9 606 aa22.05■■□□□ 1.12
CLIP2-201ENST00000223398 CUL7Q14999 1698 aa22.04■■□□□ 1.12
CLIP2-201ENST00000223398 DMRT2Q9Y5R5 561 aa22.04■■□□□ 1.12
CLIP2-201ENST00000223398 NOS1P29475 1434 aa22.04■■□□□ 1.12
CLIP2-201ENST00000223398 NUTM1Q86Y26 1132 aa22.04■■□□□ 1.12
CLIP2-201ENST00000223398 CT47A1Q5JQC4 288 aaPredicted RBP22.04■■□□□ 1.12
CLIP2-201ENST00000223398 HOMER1Q86YM7 354 aa22.04■■□□□ 1.12
CLIP2-201ENST00000223398 CCDC69A6NI79 296 aa22.03■■□□□ 1.12
CLIP2-201ENST00000223398 KRI1Q8N9T8 703 aaKnown RBP22.03■■□□□ 1.12
CLIP2-201ENST00000223398 ZSCAN25Q6NSZ9 544 aa22.03■■□□□ 1.12
CLIP2-201ENST00000223398 PIBF1Q8WXW3 757 aa22.03■■□□□ 1.12
CLIP2-201ENST00000223398 GSE1Q14687 1217 aa22.02■■□□□ 1.12
CLIP2-201ENST00000223398 CWC27Q6UX04 472 aaKnown RBP22.02■■□□□ 1.12
CLIP2-201ENST00000223398 OLFM4Q6UX06 510 aa22.02■■□□□ 1.12
CLIP2-201ENST00000223398 EXOC6BQ9Y2D4 811 aa22.02■■□□□ 1.12
CLIP2-201ENST00000223398 TAF7Q15545 349 aaPredicted RBP22.02■■□□□ 1.12
CLIP2-201ENST00000223398 PTPN23Q9H3S7 1636 aa22.02■■□□□ 1.12
CLIP2-201ENST00000223398 KRT18P05783 430 aaKnown RBP22.02■■□□□ 1.12
CLIP2-201ENST00000223398 AMOTQ4VCS5 1084 aa22.01■■□□□ 1.11
CLIP2-201ENST00000223398 CYP46A1Q9Y6A2 500 aa22.01■■□□□ 1.11
CLIP2-201ENST00000223398 FBXO3Q9UK99 471 aa22.01■■□□□ 1.11
CLIP2-201ENST00000223398 ANKIB1Q9P2G1 1089 aa22.01■■□□□ 1.11
CLIP2-201ENST00000223398 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-201ENST00000223398 TMEM57Q8N5G2 664 aa22■■□□□ 1.11
CLIP2-201ENST00000223398 UBAP1LF5GYI3 381 aa22■■□□□ 1.11
CLIP2-201ENST00000223398 GPTP24298 496 aa22■■□□□ 1.11
CLIP2-201ENST00000223398 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
CLIP2-201ENST00000223398 OFD1O75665 1012 aa21.99■■□□□ 1.11
CLIP2-201ENST00000223398 WDR97A6NE52 1622 aa21.99■■□□□ 1.11
CLIP2-201ENST00000223398 ZFYVE27Q5T4F4 411 aa21.99■■□□□ 1.11
CLIP2-201ENST00000223398 CCDC70Q6NSX1 233 aa21.99■■□□□ 1.11
CLIP2-201ENST00000223398 PDILTQ8N807 584 aa21.99■■□□□ 1.11
CLIP2-201ENST00000223398 TRMT112Q9UI30 125 aaKnown RBP21.99■■□□□ 1.11
CLIP2-201ENST00000223398 CHD1LQ86WJ1 897 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms