RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 UBR1Q8IWV7 1749 aa26.69■■□□□ 1.86
CCDC130-201ENST00000221554 ITPRIPQ8IWB1 547 aa26.69■■□□□ 1.86
CCDC130-201ENST00000221554 ARHGAP45Q92619 1136 aa26.69■■□□□ 1.86
CCDC130-201ENST00000221554 CEP170BQ9Y4F5 1589 aaPredicted RBP26.69■■□□□ 1.86
CCDC130-201ENST00000221554 ITSN1Q15811 1721 aa26.69■■□□□ 1.86
CCDC130-201ENST00000221554 BECN1Q14457 450 aa26.69■■□□□ 1.86
CCDC130-201ENST00000221554 NME9Q86XW9 330 aa26.68■■□□□ 1.86
CCDC130-201ENST00000221554 USP19O94966 1318 aa26.66■■□□□ 1.86
CCDC130-201ENST00000221554 PLEKHG1Q9ULL1 1385 aa26.66■■□□□ 1.86
CCDC130-201ENST00000221554 LMTK3Q96Q04 1460 aa26.66■■□□□ 1.86
CCDC130-201ENST00000221554 ZBTB40Q9NUA8 1239 aa26.65■■□□□ 1.86
CCDC130-201ENST00000221554 EMILIN1Q9Y6C2 1016 aa26.65■■□□□ 1.86
CCDC130-201ENST00000221554 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
CCDC130-201ENST00000221554 SMC5Q8IY18 1101 aa26.63■■□□□ 1.85
CCDC130-201ENST00000221554 ZNF853P0CG23 659 aa26.63■■□□□ 1.85
CCDC130-201ENST00000221554 TMEM57Q8N5G2 664 aa26.63■■□□□ 1.85
CCDC130-201ENST00000221554 PHACTR3Q96KR7 559 aa26.62■■□□□ 1.85
CCDC130-201ENST00000221554 ADAMTS13Q76LX8 1427 aa26.61■■□□□ 1.85
CCDC130-201ENST00000221554 PLEKHG3A1L390 1219 aa26.61■■□□□ 1.85
CCDC130-201ENST00000221554 HMOX1P09601 288 aa26.61■■□□□ 1.85
CCDC130-201ENST00000221554 HAP1P54257 671 aaPredicted RBP26.61■■□□□ 1.85
CCDC130-201ENST00000221554 VAMP4O75379 141 aa26.6■■□□□ 1.85
CCDC130-201ENST00000221554 CFAP44Q96MT7 982 aa26.6■■□□□ 1.85
CCDC130-201ENST00000221554 PIK3R4Q99570 1358 aa26.58■■□□□ 1.85
CCDC130-201ENST00000221554 FBLN1P23142 703 aa26.58■■□□□ 1.85
CCDC130-201ENST00000221554 SLC4A3P48751 1232 aa26.58■■□□□ 1.85
CCDC130-201ENST00000221554 ROBO2Q9HCK4 1378 aa26.58■■□□□ 1.84
CCDC130-201ENST00000221554 NFKBIBQ15653 356 aa26.57■■□□□ 1.84
CCDC130-201ENST00000221554 TBC1D32Q96NH3 1257 aa26.57■■□□□ 1.84
CCDC130-201ENST00000221554 PTCH1Q13635 1447 aa26.57■■□□□ 1.84
CCDC130-201ENST00000221554 NRKQ7Z2Y5 1582 aa26.57■■□□□ 1.84
CCDC130-201ENST00000221554 SEC24BO95487 1268 aa26.56■■□□□ 1.84
CCDC130-201ENST00000221554 HSPA2P54652 639 aa26.56■■□□□ 1.84
CCDC130-201ENST00000221554 MRPL50Q8N5N7 158 aaKnown RBP26.56■■□□□ 1.84
CCDC130-201ENST00000221554 BCL11AQ9H165 835 aa26.56■■□□□ 1.84
CCDC130-201ENST00000221554 EID1Q9Y6B2 187 aa26.56■■□□□ 1.84
CCDC130-201ENST00000221554 PRR36Q9H6K5 1346 aa26.56■■□□□ 1.84
CCDC130-201ENST00000221554 TTC21BQ7Z4L5 1316 aa26.56■■□□□ 1.84
CCDC130-201ENST00000221554 TOPAZ1Q8N9V7 1692 aa26.55■■□□□ 1.84
CCDC130-201ENST00000221554 ZRANB1Q9UGI0 708 aa26.54■■□□□ 1.84
CCDC130-201ENST00000221554 KIF24Q5T7B8 1368 aa26.53■■□□□ 1.84
CCDC130-201ENST00000221554 API5Q9BZZ5 524 aaKnown RBP26.53■■□□□ 1.84
CCDC130-201ENST00000221554 MBIPQ9NS73 344 aa26.53■■□□□ 1.84
CCDC130-201ENST00000221554 GCC1Q96CN9 775 aa26.52■■□□□ 1.84
CCDC130-201ENST00000221554 NUCB1Q02818 461 aa26.51■■□□□ 1.83
CCDC130-201ENST00000221554 RRS1Q15050 365 aaKnown RBP26.51■■□□□ 1.83
CCDC130-201ENST00000221554 TWISTNBQ3B726 338 aaPredicted RBP26.51■■□□□ 1.83
CCDC130-201ENST00000221554 ACEP12821 1306 aa26.51■■□□□ 1.83
CCDC130-201ENST00000221554 STRCQ7RTU9 1775 aa26.51■■□□□ 1.83
CCDC130-201ENST00000221554 OVOS2A0A0J9YW53 1432 aa26.5■■□□□ 1.83
CCDC130-201ENST00000221554 OVOS2Q6IE36 1432 aa26.5■■□□□ 1.83
CCDC130-201ENST00000221554 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.5■■□□□ 1.83
CCDC130-201ENST00000221554 TTC21AQ8NDW8 1320 aa26.5■■□□□ 1.83
CCDC130-201ENST00000221554 ZBTB7BO15156 539 aaPredicted RBP26.5■■□□□ 1.83
CCDC130-201ENST00000221554 USP6P35125 1406 aa26.5■■□□□ 1.83
CCDC130-201ENST00000221554 NCKAP5LQ9HCH0 1330 aa26.49■■□□□ 1.83
CCDC130-201ENST00000221554 TBX22Q9Y458 520 aa26.49■■□□□ 1.83
CCDC130-201ENST00000221554 SLIT1O75093 1534 aa26.49■■□□□ 1.83
CCDC130-201ENST00000221554 USP31Q70CQ4 1352 aa26.49■■□□□ 1.83
CCDC130-201ENST00000221554 DLG5Q8TDM6 1919 aa26.48■■□□□ 1.83
CCDC130-201ENST00000221554 ABCC4O15439 1325 aa26.48■■□□□ 1.83
CCDC130-201ENST00000221554 LTKP29376 864 aa26.47■■□□□ 1.83
CCDC130-201ENST00000221554 ARHGAP23Q9P227 1491 aa26.46■■□□□ 1.83
CCDC130-201ENST00000221554 EIF4A2Q14240 407 aaKnown RBP26.46■■□□□ 1.83
CCDC130-201ENST00000221554 THEMISQ8N1K5 641 aaPredicted RBP26.46■■□□□ 1.83
CCDC130-201ENST00000221554 THUMPD2Q9BTF0 503 aaKnown RBP26.46■■□□□ 1.83
CCDC130-201ENST00000221554 NALCNQ8IZF0 1738 aa26.46■■□□□ 1.83
CCDC130-201ENST00000221554 DIP2AQ14689 1571 aa26.45■■□□□ 1.83
CCDC130-201ENST00000221554 CHD1LQ86WJ1 897 aa26.44■■□□□ 1.82
CCDC130-201ENST00000221554 TSPYL6Q8N831 410 aa26.44■■□□□ 1.82
CCDC130-201ENST00000221554 SSH2Q76I76 1423 aa26.43■■□□□ 1.82
CCDC130-201ENST00000221554 EIF5BO60841 1220 aaKnown RBP26.43■■□□□ 1.82
CCDC130-201ENST00000221554 KIAA0232Q92628 1395 aa26.42■■□□□ 1.82
CCDC130-201ENST00000221554 SULT6B1Q6IMI4 303 aa26.42■■□□□ 1.82
CCDC130-201ENST00000221554 GSE1Q14687 1217 aa26.41■■□□□ 1.82
CCDC130-201ENST00000221554 C22orf23Q9BZE7 217 aa26.41■■□□□ 1.82
CCDC130-201ENST00000221554 C8orf58Q8NAV2 365 aa26.41■■□□□ 1.82
CCDC130-201ENST00000221554 PTPRUQ92729 1446 aa26.4■■□□□ 1.82
CCDC130-201ENST00000221554 AMOTL2Q9Y2J4 779 aa26.4■■□□□ 1.82
CCDC130-201ENST00000221554 ARHGEF10O15013 1369 aa26.4■■□□□ 1.82
CCDC130-201ENST00000221554 CHL1O00533 1208 aa26.38■■□□□ 1.81
CCDC130-201ENST00000221554 BMP2KLQ5H9B9 411 aa26.38■■□□□ 1.81
CCDC130-201ENST00000221554 RGPD1P0DJD0 1748 aa26.38■■□□□ 1.81
CCDC130-201ENST00000221554 ELL2O00472 640 aaPredicted RBP26.35■■□□□ 1.81
CCDC130-201ENST00000221554 FAM83GA6ND36 823 aa26.35■■□□□ 1.81
CCDC130-201ENST00000221554 INTS3Q68E01 1043 aaKnown RBP26.35■■□□□ 1.81
CCDC130-201ENST00000221554 SLC26A8Q96RN1 970 aa26.35■■□□□ 1.81
CCDC130-201ENST00000221554 TBC1D2Q9BYX2 928 aa26.35■■□□□ 1.81
CCDC130-201ENST00000221554 SBNO1A3KN83 1393 aa26.34■■□□□ 1.81
CCDC130-201ENST00000221554 PTPRCP08575 1304 aa26.34■■□□□ 1.81
CCDC130-201ENST00000221554 LNPKQ9C0E8 428 aa26.34■■□□□ 1.81
CCDC130-201ENST00000221554 ANKARQ7Z5J8 1434 aa26.33■■□□□ 1.81
CCDC130-201ENST00000221554 FLT4P35916 1363 aa26.33■■□□□ 1.81
CCDC130-201ENST00000221554 MFAP1P55081 439 aaKnown RBP26.33■■□□□ 1.8
CCDC130-201ENST00000221554 ANKRD45Q5TZF3 282 aa26.33■■□□□ 1.8
CCDC130-201ENST00000221554 ANKLE2Q86XL3 938 aa26.33■■□□□ 1.8
CCDC130-201ENST00000221554 FRAT2O75474 233 aaPredicted RBP26.32■■□□□ 1.8
CCDC130-201ENST00000221554 AEBP1Q8IUX7 1158 aa26.32■■□□□ 1.8
CCDC130-201ENST00000221554 ANTXR1Q9H6X2 564 aa26.32■■□□□ 1.8
CCDC130-201ENST00000221554 PEAK1Q9H792 1746 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms