RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
USP11-201ENST00000218348 HMOX1P09601 288 aa12.93□□□□□ -0.34
USP11-201ENST00000218348 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
USP11-201ENST00000218348 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
USP11-201ENST00000218348 RGS3P49796 1198 aa12.93□□□□□ -0.34
USP11-201ENST00000218348 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
USP11-201ENST00000218348 SLIT3O75094 1523 aa12.92□□□□□ -0.34
USP11-201ENST00000218348 NME9Q86XW9 330 aa12.92□□□□□ -0.34
USP11-201ENST00000218348 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
USP11-201ENST00000218348 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
USP11-201ENST00000218348 E9PSI1 815 aa12.91□□□□□ -0.34
USP11-201ENST00000218348 FGD1P98174 961 aa12.91□□□□□ -0.34
USP11-201ENST00000218348 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
USP11-201ENST00000218348 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
USP11-201ENST00000218348 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
USP11-201ENST00000218348 OVOS2A0A0J9YW53 1432 aa12.91□□□□□ -0.34
USP11-201ENST00000218348 NFAT5O94916 1531 aa12.91□□□□□ -0.34
USP11-201ENST00000218348 RRS1Q15050 365 aaKnown RBP12.91□□□□□ -0.34
USP11-201ENST00000218348 OVOS2Q6IE36 1432 aa12.91□□□□□ -0.34
USP11-201ENST00000218348 ORAI2Q96SN7 254 aa12.9□□□□□ -0.34
USP11-201ENST00000218348 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
USP11-201ENST00000218348 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
USP11-201ENST00000218348 PEAK1Q9H792 1746 aa12.9□□□□□ -0.35
USP11-201ENST00000218348 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.35
USP11-201ENST00000218348 COL18A1P39060 1754 aa12.89□□□□□ -0.35
USP11-201ENST00000218348 RBM10P98175 930 aaKnown RBP12.89□□□□□ -0.35
USP11-201ENST00000218348 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
USP11-201ENST00000218348 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
USP11-201ENST00000218348 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
USP11-201ENST00000218348 SLAIN2Q9P270 581 aa12.88□□□□□ -0.35
USP11-201ENST00000218348 ACEP12821 1306 aa12.88□□□□□ -0.35
USP11-201ENST00000218348 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
USP11-201ENST00000218348 TCERG1O14776 1098 aaKnown RBP12.88□□□□□ -0.35
USP11-201ENST00000218348 PMFBP1Q8TBY8 1022 aa12.88□□□□□ -0.35
USP11-201ENST00000218348 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
USP11-201ENST00000218348 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
USP11-201ENST00000218348 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
USP11-201ENST00000218348 LTN1O94822 1766 aa12.86□□□□□ -0.35
USP11-201ENST00000218348 RIPK4P57078 832 aa12.86□□□□□ -0.35
USP11-201ENST00000218348 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
USP11-201ENST00000218348 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
USP11-201ENST00000218348 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
USP11-201ENST00000218348 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
USP11-201ENST00000218348 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
USP11-201ENST00000218348 PDE4AP27815 886 aa12.84□□□□□ -0.35
USP11-201ENST00000218348 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
USP11-201ENST00000218348 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
USP11-201ENST00000218348 CAMTA1Q9Y6Y1 1673 aa12.84□□□□□ -0.35
USP11-201ENST00000218348 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
USP11-201ENST00000218348 EXOSC9Q06265 439 aaKnown RBP12.84□□□□□ -0.35
USP11-201ENST00000218348 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
USP11-201ENST00000218348 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
USP11-201ENST00000218348 RGPD1P0DJD0 1748 aa12.84□□□□□ -0.35
USP11-201ENST00000218348 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
USP11-201ENST00000218348 RLBP1P12271 317 aa12.83□□□□□ -0.36
USP11-201ENST00000218348 AAMPQ13685 434 aa12.83□□□□□ -0.36
USP11-201ENST00000218348 ATF3P18847 181 aa12.83□□□□□ -0.36
USP11-201ENST00000218348 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
USP11-201ENST00000218348 GLIPR1L2Q4G1C9 344 aa12.83□□□□□ -0.36
USP11-201ENST00000218348 USP19O94966 1318 aa12.83□□□□□ -0.36
USP11-201ENST00000218348 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
USP11-201ENST00000218348 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
USP11-201ENST00000218348 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
USP11-201ENST00000218348 DDX17Q92841 729 aaKnown RBP12.82□□□□□ -0.36
USP11-201ENST00000218348 FANCIQ9NVI1 1328 aa12.82□□□□□ -0.36
USP11-201ENST00000218348 NSD2O96028 1365 aa12.82□□□□□ -0.36
USP11-201ENST00000218348 IGHDP01880 384 aa12.82□□□□□ -0.36
USP11-201ENST00000218348 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 ABCC6O95255 1503 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 INSRP06213 1382 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 COG3Q96JB2 828 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 SMC4Q9NTJ3 1288 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
USP11-201ENST00000218348 ESCO1Q5FWF5 840 aa12.8□□□□□ -0.36
USP11-201ENST00000218348 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
USP11-201ENST00000218348 RGPD5Q99666 1765 aa12.8□□□□□ -0.36
USP11-201ENST00000218348 NEFMP07197 916 aa12.8□□□□□ -0.36
USP11-201ENST00000218348 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
USP11-201ENST00000218348 SPATA31A3Q5VYP0 1347 aa12.79□□□□□ -0.36
USP11-201ENST00000218348 TTC21AQ8NDW8 1320 aa12.79□□□□□ -0.36
USP11-201ENST00000218348 ZBTB7CA1YPR0 619 aa12.79□□□□□ -0.36
USP11-201ENST00000218348 FAM83GA6ND36 823 aa12.79□□□□□ -0.36
USP11-201ENST00000218348 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
USP11-201ENST00000218348 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
USP11-201ENST00000218348 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
USP11-201ENST00000218348 PLCH1Q4KWH8 1693 aa12.78□□□□□ -0.36
USP11-201ENST00000218348 SLC4A3P48751 1232 aa12.77□□□□□ -0.36
USP11-201ENST00000218348 AEBP1Q8IUX7 1158 aa12.77□□□□□ -0.36
USP11-201ENST00000218348 WDR63Q8IWG1 891 aa12.77□□□□□ -0.36
USP11-201ENST00000218348 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.36
USP11-201ENST00000218348 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.36
USP11-201ENST00000218348 FOXO3O43524 673 aa12.77□□□□□ -0.37
USP11-201ENST00000218348 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
USP11-201ENST00000218348 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.37
USP11-201ENST00000218348 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
USP11-201ENST00000218348 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
USP11-201ENST00000218348 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
USP11-201ENST00000218348 NOP58Q9Y2X3 529 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms