RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
PCDHB4-201ENST00000194152 MAP4K4O95819 1239 aaPredicted RBP15.98■□□□□ 0.15
PCDHB4-201ENST00000194152 EXOC6BQ9Y2D4 811 aa15.98■□□□□ 0.15
PCDHB4-201ENST00000194152 CHRNA2Q15822 529 aa15.97■□□□□ 0.15
PCDHB4-201ENST00000194152 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
PCDHB4-201ENST00000194152 PRDM10Q9NQV6 1147 aa15.97■□□□□ 0.15
PCDHB4-201ENST00000194152 MSNP26038 577 aaKnown RBP15.96■□□□□ 0.15
PCDHB4-201ENST00000194152 C1orf141Q5JVX7 400 aa15.96■□□□□ 0.15
PCDHB4-201ENST00000194152 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.15
PCDHB4-201ENST00000194152 C22orf23Q9BZE7 217 aa15.96■□□□□ 0.15
PCDHB4-201ENST00000194152 IL1RAPL2Q9NP60 686 aa15.96■□□□□ 0.14
PCDHB4-201ENST00000194152 CASC1Q6TDU7 716 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 KIAA1211Q6ZU35 1233 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 API5Q9BZZ5 524 aaKnown RBP15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 CLCN1P35523 988 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 ZNF530Q6P9A1 599 aaPredicted RBP15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 C16orf71Q8IYS4 520 aaPredicted RBP15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 PHF8Q9UPP1 1060 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 KAT6BQ8WYB5 2073 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 STRN4Q9NRL3 753 aa15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 ZHX1Q9UKY1 873 aaPredicted RBP15.95■□□□□ 0.14
PCDHB4-201ENST00000194152 UNC13BO14795 1591 aa15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 MLH3Q9UHC1 1453 aa15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 ATF3P18847 181 aa15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 MTHFSDQ2M296 383 aaKnown RBP15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 C8orf34Q49A92 452 aa15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
PCDHB4-201ENST00000194152 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
PCDHB4-201ENST00000194152 MYL6BP14649 208 aa15.93■□□□□ 0.14
PCDHB4-201ENST00000194152 SYTL4Q96C24 671 aaPredicted RBP15.93■□□□□ 0.14
PCDHB4-201ENST00000194152 ZNF521Q96K83 1311 aa15.93■□□□□ 0.14
PCDHB4-201ENST00000194152 CEP152O94986 1710 aa15.93■□□□□ 0.14
PCDHB4-201ENST00000194152 TRAK2O60296 914 aa15.93■□□□□ 0.14
PCDHB4-201ENST00000194152 KCNJ4P48050 445 aa15.93■□□□□ 0.14
PCDHB4-201ENST00000194152 ABCC3O15438 1527 aa15.92■□□□□ 0.14
PCDHB4-201ENST00000194152 EYA1Q99502 592 aa15.92■□□□□ 0.14
PCDHB4-201ENST00000194152 VAMP4O75379 141 aa15.91■□□□□ 0.14
PCDHB4-201ENST00000194152 R3HCC1Q9Y3T6 440 aaKnown RBP15.91■□□□□ 0.14
PCDHB4-201ENST00000194152 EFCAB6Q5THR3 1501 aa15.91■□□□□ 0.14
PCDHB4-201ENST00000194152 IL13P35225 146 aa15.91■□□□□ 0.14
PCDHB4-201ENST00000194152 G2E3Q7L622 706 aa15.91■□□□□ 0.14
PCDHB4-201ENST00000194152 MEIS3Q99687 375 aa15.91■□□□□ 0.14
PCDHB4-201ENST00000194152 NAP1L2Q9ULW6 460 aaPredicted RBP15.91■□□□□ 0.14
PCDHB4-201ENST00000194152 CHD1LQ86WJ1 897 aa15.9■□□□□ 0.14
PCDHB4-201ENST00000194152 C9orf78Q9NZ63 289 aaPredicted RBP15.9■□□□□ 0.14
PCDHB4-201ENST00000194152 ZMYM4Q5VZL5 1548 aa15.9■□□□□ 0.14
PCDHB4-201ENST00000194152 DNTTIP2Q5QJE6 756 aaKnown RBP15.9■□□□□ 0.14
PCDHB4-201ENST00000194152 NEO1Q92859 1461 aa15.9■□□□□ 0.14
PCDHB4-201ENST00000194152 DDX54Q8TDD1 881 aaKnown RBP15.89■□□□□ 0.13
PCDHB4-201ENST00000194152 RNF17Q9BXT8 1623 aaKnown RBP15.89■□□□□ 0.13
PCDHB4-201ENST00000194152 ROBO2Q9HCK4 1378 aa15.89■□□□□ 0.13
PCDHB4-201ENST00000194152 DTNBO60941 627 aa15.89■□□□□ 0.13
PCDHB4-201ENST00000194152 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
PCDHB4-201ENST00000194152 MRE11P49959 708 aa15.89■□□□□ 0.13
PCDHB4-201ENST00000194152 RAPGEF4Q8WZA2 1011 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 SIL1Q9H173 461 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 SURF6O75683 361 aaKnown RBP15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 MADDQ8WXG6 1647 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 HECW2Q9P2P5 1572 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 HMMRO75330 724 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 PLCB2Q00722 1185 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 PDCL3Q9H2J4 239 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 GRPEL1Q9HAV7 217 aa15.88■□□□□ 0.13
PCDHB4-201ENST00000194152 SPHKAPQ2M3C7 1700 aa15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 TET3O43151 1660 aa15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 POLR1AO95602 1720 aaPredicted RBP15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 SLC39A6Q13433 755 aa15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 OTUD7AQ8TE49 926 aaPredicted RBP15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 GAS2L2Q8NHY3 880 aa15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 ABCC11Q96J66 1382 aa15.87■□□□□ 0.13
PCDHB4-201ENST00000194152 ANO2Q9NQ90 1003 aa15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 KIF1BO60333 1816 aa15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 KIDINS220Q9ULH0 1771 aa15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 MCM4P33991 863 aa15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 IFT57Q9NWB7 429 aa15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 EVA1CP58658 441 aa15.86■□□□□ 0.13
PCDHB4-201ENST00000194152 ABCA9Q8IUA7 1624 aa15.85■□□□□ 0.13
PCDHB4-201ENST00000194152 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
PCDHB4-201ENST00000194152 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
PCDHB4-201ENST00000194152 KDM5AP29375 1690 aaKnown RBP15.85■□□□□ 0.13
PCDHB4-201ENST00000194152 UBTFL1P0CB47 393 aaPredicted RBP15.85■□□□□ 0.13
PCDHB4-201ENST00000194152 NUTM1Q86Y26 1132 aa15.85■□□□□ 0.13
PCDHB4-201ENST00000194152 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
PCDHB4-201ENST00000194152 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
PCDHB4-201ENST00000194152 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
PCDHB4-201ENST00000194152 LARP6Q9BRS8 491 aaKnown RBP15.84■□□□□ 0.13
PCDHB4-201ENST00000194152 MAP3K4Q9Y6R4 1608 aa15.84■□□□□ 0.13
PCDHB4-201ENST00000194152 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms