RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 FAM135AQ9P2D6 1515 aa12.2□□□□□ -0.46
CLDN18-201ENST00000183605 POLR3AO14802 1390 aaPredicted RBP12.2□□□□□ -0.46
CLDN18-201ENST00000183605 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
CLDN18-201ENST00000183605 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
CLDN18-201ENST00000183605 E9PCH4 1651 aa12.19□□□□□ -0.46
CLDN18-201ENST00000183605 CHMP3Q9Y3E7 222 aa12.19□□□□□ -0.46
CLDN18-201ENST00000183605 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
CLDN18-201ENST00000183605 TAF3Q5VWG9 929 aa12.19□□□□□ -0.46
CLDN18-201ENST00000183605 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
CLDN18-201ENST00000183605 PIBF1Q8WXW3 757 aa12.19□□□□□ -0.46
CLDN18-201ENST00000183605 ATP2B3Q16720 1220 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
CLDN18-201ENST00000183605 NSFL1CQ9UNZ2 370 aaKnown RBP12.18□□□□□ -0.46
CLDN18-201ENST00000183605 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 NCOA3Q9Y6Q9 1424 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 CCDC27Q2M243 656 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
CLDN18-201ENST00000183605 TTC37Q6PGP7 1564 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 CDC42BPBQ9Y5S2 1711 aa12.18□□□□□ -0.46
CLDN18-201ENST00000183605 KCNJ4P48050 445 aa12.17□□□□□ -0.46
CLDN18-201ENST00000183605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLDN18-201ENST00000183605 KDM5DQ9BY66 1539 aa12.17□□□□□ -0.46
CLDN18-201ENST00000183605 ERICH4A6NGS2 130 aa12.17□□□□□ -0.46
CLDN18-201ENST00000183605 SRPK2P78362 688 aaKnown RBP12.17□□□□□ -0.46
CLDN18-201ENST00000183605 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
CLDN18-201ENST00000183605 ANO2Q9NQ90 1003 aa12.17□□□□□ -0.46
CLDN18-201ENST00000183605 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
CLDN18-201ENST00000183605 MROH2AA6NES4 1674 aa12.17□□□□□ -0.46
CLDN18-201ENST00000183605 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
CLDN18-201ENST00000183605 CDC42BPAQ5VT25 1732 aa12.16□□□□□ -0.46
CLDN18-201ENST00000183605 FIBPO43427 364 aa12.16□□□□□ -0.46
CLDN18-201ENST00000183605 RILPL2Q969X0 211 aa12.16□□□□□ -0.46
CLDN18-201ENST00000183605 TNNT3P45378 269 aaPredicted RBP12.16□□□□□ -0.46
CLDN18-201ENST00000183605 C16orf71Q8IYS4 520 aaPredicted RBP12.16□□□□□ -0.46
CLDN18-201ENST00000183605 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.46
CLDN18-201ENST00000183605 RIOK3O14730 519 aaKnown RBP12.15□□□□□ -0.46
CLDN18-201ENST00000183605 SIGLEC1Q9BZZ2 1709 aa12.15□□□□□ -0.46
CLDN18-201ENST00000183605 ERC2O15083 957 aa12.15□□□□□ -0.46
CLDN18-201ENST00000183605 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
CLDN18-201ENST00000183605 SMARCA5O60264 1052 aaPredicted RBP12.15□□□□□ -0.47
CLDN18-201ENST00000183605 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.47
CLDN18-201ENST00000183605 TMX3Q96JJ7 454 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 ADGBQ8N7X0 1667 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 TMEM132EQ6IEE7 984 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 PRDM15P57071 1507 aaPredicted RBP12.14□□□□□ -0.47
CLDN18-201ENST00000183605 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 TRPM1Q7Z4N2 1603 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 NPHP1O15259 732 aa12.14□□□□□ -0.47
CLDN18-201ENST00000183605 C16orf45Q96MC5 204 aaPredicted RBP12.14□□□□□ -0.47
CLDN18-201ENST00000183605 THUMPD2Q9BTF0 503 aaKnown RBP12.14□□□□□ -0.47
CLDN18-201ENST00000183605 UPF3BQ9BZI7 483 aaKnown RBP12.14□□□□□ -0.47
CLDN18-201ENST00000183605 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
CLDN18-201ENST00000183605 TTC22Q5TAA0 569 aa12.13□□□□□ -0.47
CLDN18-201ENST00000183605 API5Q9BZZ5 524 aaKnown RBP12.13□□□□□ -0.47
CLDN18-201ENST00000183605 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
CLDN18-201ENST00000183605 ZNF710Q8N1W2 664 aa12.13□□□□□ -0.47
CLDN18-201ENST00000183605 CCDC112Q8NEF3 446 aa12.13□□□□□ -0.47
CLDN18-201ENST00000183605 TPM3P06753 285 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 MCM2P49736 904 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 CCDC141Q6ZP82 1450 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 SDSP20132 328 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 TPD52L1Q16890 204 aaPredicted RBP12.12□□□□□ -0.47
CLDN18-201ENST00000183605 NUTM2DQ5VT03 806 aaPredicted RBP12.12□□□□□ -0.47
CLDN18-201ENST00000183605 USP48Q86UV5 1035 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 STK26Q9P289 416 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 WDR33Q9C0J8 1336 aaKnown RBP12.12□□□□□ -0.47
CLDN18-201ENST00000183605 GADD45BO75293 160 aaPredicted RBP12.12□□□□□ -0.47
CLDN18-201ENST00000183605 ALDH1L2Q3SY69 923 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
CLDN18-201ENST00000183605 KIF3BO15066 747 aa12.11□□□□□ -0.47
CLDN18-201ENST00000183605 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
CLDN18-201ENST00000183605 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
CLDN18-201ENST00000183605 ZBTB7BO15156 539 aaPredicted RBP12.11□□□□□ -0.47
CLDN18-201ENST00000183605 HMOX1P09601 288 aa12.11□□□□□ -0.47
CLDN18-201ENST00000183605 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
CLDN18-201ENST00000183605 GIMAP6Q6P9H5 292 aa12.11□□□□□ -0.47
CLDN18-201ENST00000183605 ZBTB22O15209 634 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 HMMRO75330 724 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 GTF2E1P29083 439 aaPredicted RBP12.1□□□□□ -0.47
CLDN18-201ENST00000183605 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
CLDN18-201ENST00000183605 FEZ1Q99689 392 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 TRIM5Q9C035 493 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 KANK1Q14678 1352 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 PLXNC1O60486 1568 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
CLDN18-201ENST00000183605 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
CLDN18-201ENST00000183605 ZDHHC9Q9Y397 364 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms