RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
KDM4B-201ENST00000159111 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
KDM4B-201ENST00000159111 CYP46A1Q9Y6A2 500 aa20.42■□□□□ 0.86
KDM4B-201ENST00000159111 K7ELQ4 463 aaPredicted RBP20.41■□□□□ 0.86
KDM4B-201ENST00000159111 RRS1Q15050 365 aaKnown RBP20.41■□□□□ 0.86
KDM4B-201ENST00000159111 TSPY26PQ9H489 355 aa20.41■□□□□ 0.86
KDM4B-201ENST00000159111 GNL3LQ9NVN8 582 aaKnown RBP20.41■□□□□ 0.86
KDM4B-201ENST00000159111 FYB1O15117 783 aa20.4■□□□□ 0.86
KDM4B-201ENST00000159111 SCAF11Q99590 1463 aaKnown RBP20.4■□□□□ 0.86
KDM4B-201ENST00000159111 PDE4CQ08493 712 aa20.4■□□□□ 0.86
KDM4B-201ENST00000159111 SDF4Q9BRK5 362 aa20.4■□□□□ 0.86
KDM4B-201ENST00000159111 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
KDM4B-201ENST00000159111 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
KDM4B-201ENST00000159111 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.86
KDM4B-201ENST00000159111 ALDH1L2Q3SY69 923 aa20.39■□□□□ 0.86
KDM4B-201ENST00000159111 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
KDM4B-201ENST00000159111 NSD2O96028 1365 aa20.39■□□□□ 0.85
KDM4B-201ENST00000159111 BTBD11A6QL63 1104 aa20.39■□□□□ 0.85
KDM4B-201ENST00000159111 GNAT3A8MTJ3 354 aa20.39■□□□□ 0.85
KDM4B-201ENST00000159111 CAVIN1Q6NZI2 390 aaKnown RBP20.38■□□□□ 0.85
KDM4B-201ENST00000159111 KINO60870 393 aaKnown RBP20.38■□□□□ 0.85
KDM4B-201ENST00000159111 ZSCAN25Q6NSZ9 544 aa20.37■□□□□ 0.85
KDM4B-201ENST00000159111 TOM1L2Q6ZVM7 507 aa20.37■□□□□ 0.85
KDM4B-201ENST00000159111 CCDC43Q96MW1 224 aaKnown RBP20.37■□□□□ 0.85
KDM4B-201ENST00000159111 STRN4Q9NRL3 753 aa20.37■□□□□ 0.85
KDM4B-201ENST00000159111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.37■□□□□ 0.85
KDM4B-201ENST00000159111 PRPF40AO75400 957 aaKnown RBP20.37■□□□□ 0.85
KDM4B-201ENST00000159111 WDR33Q9C0J8 1336 aaKnown RBP20.37■□□□□ 0.85
KDM4B-201ENST00000159111 SLC26A8Q96RN1 970 aa20.37■□□□□ 0.85
KDM4B-201ENST00000159111 CIZ1Q9ULV3 898 aaPredicted RBP20.36■□□□□ 0.85
KDM4B-201ENST00000159111 CCDC173Q0VFZ6 552 aa20.35■□□□□ 0.85
KDM4B-201ENST00000159111 ARGLU1Q9NWB6 273 aaPredicted RBP20.35■□□□□ 0.85
KDM4B-201ENST00000159111 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
KDM4B-201ENST00000159111 ZSCAN31Q96LW9 406 aaPredicted RBP20.34■□□□□ 0.85
KDM4B-201ENST00000159111 TEX35Q5T0J7 233 aa20.33■□□□□ 0.85
KDM4B-201ENST00000159111 NACAP1Q9BZK3 213 aa20.33■□□□□ 0.85
KDM4B-201ENST00000159111 SRGAP3O43295 1099 aa20.33■□□□□ 0.84
KDM4B-201ENST00000159111 JMYQ8N9B5 988 aa20.33■□□□□ 0.84
KDM4B-201ENST00000159111 ITSN2Q9NZM3 1697 aa20.33■□□□□ 0.84
KDM4B-201ENST00000159111 AACSQ86V21 672 aa20.33■□□□□ 0.84
KDM4B-201ENST00000159111 PDIA4P13667 645 aaKnown RBP20.32■□□□□ 0.84
KDM4B-201ENST00000159111 MNS1Q8NEH6 495 aa20.32■□□□□ 0.84
KDM4B-201ENST00000159111 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
KDM4B-201ENST00000159111 DHX8Q14562 1220 aaKnown RBP20.32■□□□□ 0.84
KDM4B-201ENST00000159111 RAPGEF6Q8TEU7 1601 aa20.32■□□□□ 0.84
KDM4B-201ENST00000159111 CCDC57Q2TAC2 916 aa20.32■□□□□ 0.84
KDM4B-201ENST00000159111 CCP110O43303 1012 aa20.32■□□□□ 0.84
KDM4B-201ENST00000159111 SIL1Q9H173 461 aa20.32■□□□□ 0.84
KDM4B-201ENST00000159111 MYL6BP14649 208 aa20.31■□□□□ 0.84
KDM4B-201ENST00000159111 C11orf95C9JLR9 678 aaPredicted RBP20.31■□□□□ 0.84
KDM4B-201ENST00000159111 STK38Q15208 465 aa20.31■□□□□ 0.84
KDM4B-201ENST00000159111 TXLNAP40222 546 aa20.31■□□□□ 0.84
KDM4B-201ENST00000159111 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
KDM4B-201ENST00000159111 RARSP54136 660 aaKnown RBP20.3■□□□□ 0.84
KDM4B-201ENST00000159111 SETQ01105 290 aaPredicted RBP20.3■□□□□ 0.84
KDM4B-201ENST00000159111 TRIM5Q9C035 493 aa20.3■□□□□ 0.84
KDM4B-201ENST00000159111 KRT32Q14532 448 aa20.3■□□□□ 0.84
KDM4B-201ENST00000159111 RNF214Q8ND24 703 aa20.3■□□□□ 0.84
KDM4B-201ENST00000159111 ACBD3Q9H3P7 528 aa20.3■□□□□ 0.84
KDM4B-201ENST00000159111 FANCAO15360 1455 aa20.3■□□□□ 0.84
KDM4B-201ENST00000159111 FAM177BA6PVY3 158 aa20.3■□□□□ 0.84
KDM4B-201ENST00000159111 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
KDM4B-201ENST00000159111 FIBPO43427 364 aa20.29■□□□□ 0.84
KDM4B-201ENST00000159111 UGGT2Q9NYU1 1516 aa20.29■□□□□ 0.84
KDM4B-201ENST00000159111 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
KDM4B-201ENST00000159111 CTNNA3Q9UI47 895 aa20.29■□□□□ 0.84
KDM4B-201ENST00000159111 ADGRF5Q8IZF2 1346 aa20.29■□□□□ 0.84
KDM4B-201ENST00000159111 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
KDM4B-201ENST00000159111 PDRG1Q9NUG6 133 aa20.28■□□□□ 0.84
KDM4B-201ENST00000159111 DENND4BO75064 1496 aaPredicted RBP20.28■□□□□ 0.84
KDM4B-201ENST00000159111 TRIM22Q8IYM9 498 aa20.28■□□□□ 0.84
KDM4B-201ENST00000159111 NOS1P29475 1434 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 EPS15P42566 896 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 FILIP1LQ4L180 1135 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 RRP12Q5JTH9 1297 aaKnown RBP20.27■□□□□ 0.84
KDM4B-201ENST00000159111 WAPLQ7Z5K2 1190 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 PDILTQ8N807 584 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 MAP4K4O95819 1239 aaPredicted RBP20.27■□□□□ 0.84
KDM4B-201ENST00000159111 KRT85P78386 507 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 CCDC192P0DO97 292 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 BLOC1S2Q6QNY1 142 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 PRDM11Q9NQV5 511 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 FAM13BQ9NYF5 915 aa20.27■□□□□ 0.84
KDM4B-201ENST00000159111 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
KDM4B-201ENST00000159111 DHX29Q7Z478 1369 aaKnown RBP20.27■□□□□ 0.83
KDM4B-201ENST00000159111 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.83
KDM4B-201ENST00000159111 CCDC69A6NI79 296 aa20.26■□□□□ 0.83
KDM4B-201ENST00000159111 CDKL5O76039 1030 aa20.26■□□□□ 0.83
KDM4B-201ENST00000159111 LRPPRCP42704 1394 aaKnown RBP20.26■□□□□ 0.83
KDM4B-201ENST00000159111 WASLO00401 505 aaPredicted RBP20.26■□□□□ 0.83
KDM4B-201ENST00000159111 SMARCE1Q969G3 411 aa20.26■□□□□ 0.83
KDM4B-201ENST00000159111 SMC2O95347 1197 aa20.25■□□□□ 0.83
KDM4B-201ENST00000159111 NAP1L1P55209 391 aaKnown RBP20.25■□□□□ 0.83
KDM4B-201ENST00000159111 ZNF771Q7L3S4 317 aaPredicted RBP20.25■□□□□ 0.83
KDM4B-201ENST00000159111 UNC13AQ9UPW8 1703 aa20.25■□□□□ 0.83
KDM4B-201ENST00000159111 MTERF4Q7Z6M4 381 aaKnown RBP20.25■□□□□ 0.83
KDM4B-201ENST00000159111 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
KDM4B-201ENST00000159111 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
KDM4B-201ENST00000159111 MPHOSPH8Q99549 860 aa20.25■□□□□ 0.83
KDM4B-201ENST00000159111 CDK5RAP3Q96JB5 506 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms