RNA–Protein interactions for RNA: ENST00000157812.6

PSMC4-201, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-201ENST00000157812 PLIN1O60240 522 aa17.29■□□□□ 0.36
PSMC4-201ENST00000157812 PDE3AQ14432 1141 aa17.29■□□□□ 0.36
PSMC4-201ENST00000157812 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
PSMC4-201ENST00000157812 COL3A1P02461 1466 aaPredicted RBP17.29■□□□□ 0.36
PSMC4-201ENST00000157812 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
PSMC4-201ENST00000157812 NLRP6P59044 892 aa17.28■□□□□ 0.36
PSMC4-201ENST00000157812 TCP11L2Q8N4U5 519 aa17.28■□□□□ 0.36
PSMC4-201ENST00000157812 ARHGEF10O15013 1369 aa17.27■□□□□ 0.36
PSMC4-201ENST00000157812 USP31Q70CQ4 1352 aa17.27■□□□□ 0.36
PSMC4-201ENST00000157812 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
PSMC4-201ENST00000157812 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
PSMC4-201ENST00000157812 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
PSMC4-201ENST00000157812 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.35
PSMC4-201ENST00000157812 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.35
PSMC4-201ENST00000157812 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
PSMC4-201ENST00000157812 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
PSMC4-201ENST00000157812 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
PSMC4-201ENST00000157812 ZRANB1Q9UGI0 708 aa17.26■□□□□ 0.35
PSMC4-201ENST00000157812 COL16A1Q07092 1604 aaPredicted RBP17.26■□□□□ 0.35
PSMC4-201ENST00000157812 PNPLA6Q8IY17 1366 aa17.26■□□□□ 0.35
PSMC4-201ENST00000157812 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
PSMC4-201ENST00000157812 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
PSMC4-201ENST00000157812 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
PSMC4-201ENST00000157812 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
PSMC4-201ENST00000157812 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
PSMC4-201ENST00000157812 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.35
PSMC4-201ENST00000157812 PHRF1Q9P1Y6 1649 aaKnown RBP17.23■□□□□ 0.35
PSMC4-201ENST00000157812 LTN1O94822 1766 aa17.23■□□□□ 0.35
PSMC4-201ENST00000157812 CRYBG1Q9Y4K1 1723 aa17.23■□□□□ 0.35
PSMC4-201ENST00000157812 MSH5O43196 834 aa17.22■□□□□ 0.35
PSMC4-201ENST00000157812 C20orf194Q5TEA3 1177 aa17.22■□□□□ 0.35
PSMC4-201ENST00000157812 MED1Q15648 1581 aaPredicted RBP17.22■□□□□ 0.35
PSMC4-201ENST00000157812 IL16Q14005 1332 aa17.22■□□□□ 0.35
PSMC4-201ENST00000157812 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
PSMC4-201ENST00000157812 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
PSMC4-201ENST00000157812 SLIT3O75094 1523 aa17.2■□□□□ 0.34
PSMC4-201ENST00000157812 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
PSMC4-201ENST00000157812 SOX12O15370 315 aa17.19■□□□□ 0.34
PSMC4-201ENST00000157812 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
PSMC4-201ENST00000157812 USP19O94966 1318 aa17.19■□□□□ 0.34
PSMC4-201ENST00000157812 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
PSMC4-201ENST00000157812 AATKQ6ZMQ8 1374 aa17.19■□□□□ 0.34
PSMC4-201ENST00000157812 DIAPH1O60610 1272 aaKnown RBP17.19■□□□□ 0.34
PSMC4-201ENST00000157812 BACH2Q9BYV9 841 aa17.18■□□□□ 0.34
PSMC4-201ENST00000157812 NFAT5O94916 1531 aa17.17■□□□□ 0.34
PSMC4-201ENST00000157812 PDE4AP27815 886 aa17.17■□□□□ 0.34
PSMC4-201ENST00000157812 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
PSMC4-201ENST00000157812 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
PSMC4-201ENST00000157812 BCAR3O75815 825 aa17.16■□□□□ 0.34
PSMC4-201ENST00000157812 GCP02774 474 aa17.16■□□□□ 0.34
PSMC4-201ENST00000157812 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
PSMC4-201ENST00000157812 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
PSMC4-201ENST00000157812 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
PSMC4-201ENST00000157812 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-201ENST00000157812 FCHSD2O94868 740 aa17.15■□□□□ 0.34
PSMC4-201ENST00000157812 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
PSMC4-201ENST00000157812 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
PSMC4-201ENST00000157812 NEUROD2Q15784 382 aa17.15■□□□□ 0.34
PSMC4-201ENST00000157812 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
PSMC4-201ENST00000157812 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
PSMC4-201ENST00000157812 NEFMP07197 916 aa17.14■□□□□ 0.33
PSMC4-201ENST00000157812 FBLN1P23142 703 aa17.14■□□□□ 0.33
PSMC4-201ENST00000157812 RRS1Q15050 365 aaKnown RBP17.14■□□□□ 0.33
PSMC4-201ENST00000157812 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
PSMC4-201ENST00000157812 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
PSMC4-201ENST00000157812 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
PSMC4-201ENST00000157812 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
PSMC4-201ENST00000157812 JCADQ9P266 1359 aa17.12■□□□□ 0.33
PSMC4-201ENST00000157812 HSPA1LP34931 641 aa17.12■□□□□ 0.33
PSMC4-201ENST00000157812 CLUAP1Q96AJ1 413 aa17.12■□□□□ 0.33
PSMC4-201ENST00000157812 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
PSMC4-201ENST00000157812 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
PSMC4-201ENST00000157812 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
PSMC4-201ENST00000157812 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
PSMC4-201ENST00000157812 AMPHP49418 695 aa17.11■□□□□ 0.33
PSMC4-201ENST00000157812 ZBTB7CA1YPR0 619 aa17.11■□□□□ 0.33
PSMC4-201ENST00000157812 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
PSMC4-201ENST00000157812 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
PSMC4-201ENST00000157812 FLT4P35916 1363 aa17.1■□□□□ 0.33
PSMC4-201ENST00000157812 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
PSMC4-201ENST00000157812 ZNF428Q96B54 188 aa17.1■□□□□ 0.33
PSMC4-201ENST00000157812 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
PSMC4-201ENST00000157812 FBXO41Q8TF61 875 aa17.09■□□□□ 0.33
PSMC4-201ENST00000157812 CPDO75976 1380 aa17.08■□□□□ 0.33
PSMC4-201ENST00000157812 ABCC6O95255 1503 aa17.08■□□□□ 0.33
PSMC4-201ENST00000157812 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.32
PSMC4-201ENST00000157812 ZBTB47Q9UFB7 747 aaPredicted RBP17.07■□□□□ 0.32
PSMC4-201ENST00000157812 COL18A1P39060 1754 aa17.07■□□□□ 0.32
PSMC4-201ENST00000157812 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
PSMC4-201ENST00000157812 HOXC9P31274 260 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 DDRGK1Q96HY6 314 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 PRDM11Q9NQV5 511 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 COL14A1Q05707 1796 aaKnown RBP17.06■□□□□ 0.32
PSMC4-201ENST00000157812 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 RIPK4P57078 832 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 FAM161AQ3B820 660 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 IP6K1Q92551 441 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
PSMC4-201ENST00000157812 NUTM2BA6NNL0 878 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms