RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 IL16Q14005 1332 aa16.65■□□□□ 0.26
CTNS-201ENST00000046640 KIF20BQ96Q89 1820 aa16.65■□□□□ 0.26
CTNS-201ENST00000046640 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
CTNS-201ENST00000046640 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.25
CTNS-201ENST00000046640 USP19O94966 1318 aa16.64■□□□□ 0.25
CTNS-201ENST00000046640 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
CTNS-201ENST00000046640 SULT6B1Q6IMI4 303 aa16.64■□□□□ 0.25
CTNS-201ENST00000046640 ANKRD26Q9UPS8 1709 aa16.64■□□□□ 0.25
CTNS-201ENST00000046640 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
CTNS-201ENST00000046640 FAM135BQ49AJ0 1406 aa16.63■□□□□ 0.25
CTNS-201ENST00000046640 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
CTNS-201ENST00000046640 VAMP4O75379 141 aa16.62■□□□□ 0.25
CTNS-201ENST00000046640 C8orf58Q8NAV2 365 aa16.62■□□□□ 0.25
CTNS-201ENST00000046640 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
CTNS-201ENST00000046640 KRT24Q2M2I5 525 aa16.61■□□□□ 0.25
CTNS-201ENST00000046640 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
CTNS-201ENST00000046640 TTC21BQ7Z4L5 1316 aa16.61■□□□□ 0.25
CTNS-201ENST00000046640 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
CTNS-201ENST00000046640 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
CTNS-201ENST00000046640 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
CTNS-201ENST00000046640 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
CTNS-201ENST00000046640 KIF16BQ96L93 1317 aa16.6■□□□□ 0.25
CTNS-201ENST00000046640 AAMPQ13685 434 aa16.6■□□□□ 0.25
CTNS-201ENST00000046640 MCM10Q7L590 875 aa16.6■□□□□ 0.25
CTNS-201ENST00000046640 ZBTB40Q9NUA8 1239 aa16.6■□□□□ 0.25
CTNS-201ENST00000046640 ADAMTS13Q76LX8 1427 aa16.59■□□□□ 0.25
CTNS-201ENST00000046640 GNAI1P63096 354 aa16.59■□□□□ 0.25
CTNS-201ENST00000046640 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
CTNS-201ENST00000046640 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
CTNS-201ENST00000046640 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
CTNS-201ENST00000046640 LNPKQ9C0E8 428 aa16.59■□□□□ 0.25
CTNS-201ENST00000046640 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.24
CTNS-201ENST00000046640 BECN1Q14457 450 aa16.57■□□□□ 0.24
CTNS-201ENST00000046640 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
CTNS-201ENST00000046640 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
CTNS-201ENST00000046640 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
CTNS-201ENST00000046640 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
CTNS-201ENST00000046640 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
CTNS-201ENST00000046640 MFAP1P55081 439 aaKnown RBP16.56■□□□□ 0.24
CTNS-201ENST00000046640 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
CTNS-201ENST00000046640 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
CTNS-201ENST00000046640 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
CTNS-201ENST00000046640 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
CTNS-201ENST00000046640 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
CTNS-201ENST00000046640 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
CTNS-201ENST00000046640 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
CTNS-201ENST00000046640 CFAP44Q96MT7 982 aa16.55■□□□□ 0.24
CTNS-201ENST00000046640 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
CTNS-201ENST00000046640 FOXO3O43524 673 aa16.55■□□□□ 0.24
CTNS-201ENST00000046640 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
CTNS-201ENST00000046640 TECPR2O15040 1411 aa16.54■□□□□ 0.24
CTNS-201ENST00000046640 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
CTNS-201ENST00000046640 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
CTNS-201ENST00000046640 ZBTB7BO15156 539 aaPredicted RBP16.53■□□□□ 0.24
CTNS-201ENST00000046640 ANKRD45Q5TZF3 282 aa16.53■□□□□ 0.24
CTNS-201ENST00000046640 UBR1Q8IWV7 1749 aa16.53■□□□□ 0.24
CTNS-201ENST00000046640 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
CTNS-201ENST00000046640 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.52■□□□□ 0.24
CTNS-201ENST00000046640 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.24
CTNS-201ENST00000046640 PLEKHG1Q9ULL1 1385 aa16.52■□□□□ 0.23
CTNS-201ENST00000046640 PLEKHG3A1L390 1219 aa16.52■□□□□ 0.23
CTNS-201ENST00000046640 SMC5Q8IY18 1101 aa16.52■□□□□ 0.23
CTNS-201ENST00000046640 TBC1D2Q9BYX2 928 aa16.52■□□□□ 0.23
CTNS-201ENST00000046640 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
CTNS-201ENST00000046640 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
CTNS-201ENST00000046640 AMPHP49418 695 aa16.5■□□□□ 0.23
CTNS-201ENST00000046640 USP6P35125 1406 aa16.49■□□□□ 0.23
CTNS-201ENST00000046640 KCNA6P17658 529 aa16.49■□□□□ 0.23
CTNS-201ENST00000046640 TBC1D32Q96NH3 1257 aa16.49■□□□□ 0.23
CTNS-201ENST00000046640 NLRP6P59044 892 aa16.49■□□□□ 0.23
CTNS-201ENST00000046640 CHD1LQ86WJ1 897 aa16.48■□□□□ 0.23
CTNS-201ENST00000046640 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
CTNS-201ENST00000046640 APBB1O00213 710 aa16.48■□□□□ 0.23
CTNS-201ENST00000046640 NUCB1Q02818 461 aa16.48■□□□□ 0.23
CTNS-201ENST00000046640 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
CTNS-201ENST00000046640 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
CTNS-201ENST00000046640 MON2Q7Z3U7 1717 aa16.47■□□□□ 0.23
CTNS-201ENST00000046640 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
CTNS-201ENST00000046640 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
CTNS-201ENST00000046640 C22orf23Q9BZE7 217 aa16.46■□□□□ 0.23
CTNS-201ENST00000046640 ITSN1Q15811 1721 aa16.46■□□□□ 0.23
CTNS-201ENST00000046640 C3P01024 1663 aa16.46■□□□□ 0.23
CTNS-201ENST00000046640 NECTIN2Q92692 538 aa16.46■□□□□ 0.23
CTNS-201ENST00000046640 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
CTNS-201ENST00000046640 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
CTNS-201ENST00000046640 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
CTNS-201ENST00000046640 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
CTNS-201ENST00000046640 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
CTNS-201ENST00000046640 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
CTNS-201ENST00000046640 EYA1Q99502 592 aa16.44■□□□□ 0.22
CTNS-201ENST00000046640 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
CTNS-201ENST00000046640 KNDC1Q76NI1 1749 aa16.44■□□□□ 0.22
CTNS-201ENST00000046640 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
CTNS-201ENST00000046640 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
CTNS-201ENST00000046640 ABCC4O15439 1325 aa16.43■□□□□ 0.22
CTNS-201ENST00000046640 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
CTNS-201ENST00000046640 CHL1O00533 1208 aa16.43■□□□□ 0.22
CTNS-201ENST00000046640 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
CTNS-201ENST00000046640 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
CTNS-201ENST00000046640 VIRMAQ69YN4 1812 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms