RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Cc2d2aQ8CFW7 1633 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Zscan20B2KFW1 1030 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Ccar2Q8VDP4 922 aaKnown RBP17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Rab3gap2Q8BMG7 1366 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Igf2bp2Q5SF07 592 aaKnown RBP17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Ccdc155Q80VJ8 648 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Abcd1P48410 736 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Eif5P59325 429 aaKnown RBP17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Frmd3Q8BHD4 595 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 IncenpQ9WU62 880 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Zfp444Q3TDV8 331 aaKnown RBP17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Lrrfip2Q91WK0 415 aa17.19■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Ccdc173A0JLY1 547 aa17.18■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Vps37dQ810I0 261 aa17.18■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Pms1Q8K119 917 aa17.18■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Dhx9O70133 1380 aaKnown RBP17.18■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Larp1Q6ZQ58 1072 aaKnown RBP17.18■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Mcm2P97310 904 aa17.18■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Ncbp1Q3UYV9 790 aaKnown RBP17.18■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Iqgap2Q3UQ44 1575 aa17.17■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Gsdma2Q32M21 443 aa17.17■□□□□ 0.34
Shroom3-202ENSMUST00000113054 ItpripQ3TNL8 555 aa17.16■□□□□ 0.34
Shroom3-202ENSMUST00000113054 TnmdQ9EP64 317 aa17.16■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Hap1O35668 628 aa17.16■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Smarca5Q91ZW3 1051 aaKnown RBP17.16■□□□□ 0.34
Shroom3-202ENSMUST00000113054 GlmnQ8BZM1 596 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Anp32eP97822 260 aaKnown RBP17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Serpina10Q8R121 448 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Mctp1E9PV86 951 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Prkrip1Q9CWV6 186 aaKnown RBP17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Cpa2Q504N0 417 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Mns1Q61884 491 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Kiaa0753Q6A000 959 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Ripk4Q9ERK0 786 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 TmpoQ61033 693 aaKnown RBP17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 GphnQ8BUV3 769 aaKnown RBP17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Iqca1Q9CUL5 857 aa17.15■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Olfml1Q8BSH2 233 aa17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Klc3Q91W40 508 aa17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Tbc1d7Q9D0K0 293 aa17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Ces1hD3Z298 562 aa17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 EzrP26040 586 aaKnown RBP17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Fam13aQ8BGI4 693 aa17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Slc5a4bQ91ZP4 660 aa17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Mrvi1Q9WUX5 899 aaKnown RBP17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Eif3aP23116 1344 aaKnown RBP17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Q4VA45 678 aa17.14■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Trim30cD3YVI9 513 aa17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Slc4a2P13808 1237 aaKnown RBP17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Fam13bQ8K2H3 851 aa17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Stim1P70302 685 aa17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Brf1Q8CFK2 676 aa17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Lrrc45Q8CIM1 670 aa17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 PdcQ9QW08 244 aa17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Washc2Q6PGL7 1334 aa17.13■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Tmco3Q8BH01 678 aa17.12■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Rnf216P58283 853 aa17.12■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Polr1aO35134 1717 aaKnown RBP17.12■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Lamb3Q61087 1168 aa17.12■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Krt84Q99M73 603 aa17.12■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Aplp1Q03157 653 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Kif18aQ91WD7 886 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 SrrtQ99MR6 875 aaKnown RBP17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Elp1Q7TT37 1333 aaKnown RBP17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Plekhg5Q66T02 1073 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 1700010I14RikQ7TPG0 532 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Zeb2Q9R0G7 1215 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 InsrP15208 1372 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Gm10563F6WIE4 79 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Cyp26c1B2RXA7 518 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Nsfl1cQ9CZ44 370 aaKnown RBP17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 AampJ3QN89 436 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 GpkowQ56A08 488 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Ttc5Q99LG4 440 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Ankrd36D3Z4K0 1415 aa17.11■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Irgm2A0A140LIF8 407 aa17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Ptpdc1Q6NZK8 747 aa17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Slc26a8Q8R0C3 999 aa17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Kif3cO35066 796 aa17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Polr3dQ91WD1 398 aa17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Rbm10Q99KG3 930 aaKnown RBP17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Cep112Q5PR68 954 aa17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Eif3bQ8JZQ9 803 aaKnown RBP17.1■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Samm50Q8BGH2 469 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 AidaQ8C4Q6 305 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Frat2Q8K025 231 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Q9D5Q8 446 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 ScribQ80U72 1612 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Q3UJC8 639 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Bag1Q60739 355 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Top1mtQ8R4U6 593 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Slc5a1Q8C3K6 665 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Gcc1Q9D4H2 778 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 ZgpatQ8VDM1 511 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Cdc45Q9Z1X9 566 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Gm7298A0A0N4SVU1 1476 aa17.09■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Zbtb21E9Q444 1094 aa17.08■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Smarca2Q6DIC0 1577 aa17.08■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Egfem1Q8C088 590 aa17.08■□□□□ 0.33
Shroom3-202ENSMUST00000113054 Tfip11Q9ERA6 838 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 1190.5 ms