RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CAPN15O75808 1086 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 ASLP04424 464 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 HLA-DQB2P05538 268 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 TSPAN8P19075 237 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 PCSK6P29122 969 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 CD151P48509 253 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 AGKQ53H12 422 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 LAYNQ6UX15 382 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 CYP2R1Q6VVX0 501 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 CYHR1Q6ZMK1 362 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 PPHLN1Q8NEY8 458 aaKnown RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 SCAMP5Q8TAC9 235 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 SH3RF2Q8TEC5 729 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 LPGAT1Q92604 370 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 LPPQ93052 612 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 MRGPRX2Q96LB1 330 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 SLC29A1Q99808 456 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 MRPS26Q9BYN8 205 aaKnown RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 HSFX1Q9UBD0 423 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 AP4S1Q9Y587 144 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 A8MT66 165 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 BTBD19C9JJ37 291 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 AP3B1O00203 1094 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 CPB1P15086 417 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 BDNFP23560 247 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 DNAJB2P25686 324 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 KCNC1P48547 511 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 SEPT6Q14141 434 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 RANBP10Q6VN20 620 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 ATPAF2Q8N5M1 289 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 FAM110BQ8TC76 370 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 ANKRD49Q8WVL7 239 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 RTP3Q9BQQ7 232 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 UTP6Q9NYH9 597 aaKnown RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 PTTG2Q9NZH5 202 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 TRIP12Q14669 1992 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 ATP6AP2A0A1C7CYW4 349 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 H3BSA7 217 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 UBFD1O14562 309 aaKnown RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 TRIM24O15164 1050 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 PSMD3O43242 534 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 ATP6AP2O75787 350 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 DNAJB1P25685 340 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 YWHAQP27348 245 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 LHX1P48742 406 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 DNAJB13P59910 316 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 TECRLQ5HYJ1 363 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 REP15Q6BDI9 236 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 NEPROQ6NW34 567 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 POTEHQ6S545 545 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 CUZD1Q86UP6 607 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 B4GALNT2Q8NHY0 566 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 ZNF512Q96ME7 567 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 SLC39A3Q9BRY0 314 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 SPON1Q9HCB6 807 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 FBRSL1Q9HCM7 1045 aaKnown RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 RBM22Q9NW64 420 aaKnown RBP eCLIP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 NUDT5Q9UKK9 219 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 PSMD12O00232 456 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 UBDO15205 165 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 MATN3O15232 486 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 ANXA9O76027 345 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 PSMD8P48556 350 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 CRYBB1P53674 252 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 RHDQ02161 417 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 FASTKQ14296 549 aaKnown RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 GRB14Q14449 540 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 CYTH1Q15438 398 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 PCSK7Q16549 785 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 PITRM1Q5JRX3 1037 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 B3GNT6Q6ZMB0 384 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 LDB1Q86U70 411 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 CHERPQ8IWX8 916 aaKnown RBP13.93□□□□□ -0.18
PHGDH-233ENST00000642021 UNC93B1Q9H1C4 597 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 TMLHEQ9NVH6 421 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 RRN3Q9NYV6 651 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 SFMBT1Q9UHJ3 866 aa13.93□□□□□ -0.18
PHGDH-233ENST00000642021 CASTOR2A6NHX0 329 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 MSI1O43347 362 aaKnown RBP13.92□□□□□ -0.18
PHGDH-233ENST00000642021 IPO13O94829 963 aaKnown RBP13.92□□□□□ -0.18
PHGDH-233ENST00000642021 C8BP07358 591 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 CCDC166P0CW27 439 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 POLD2P49005 469 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 SLC12A2P55011 1212 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 COG7P83436 770 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 PFKPQ01813 784 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 CREB5Q02930 508 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 EIF4EBP2Q13542 120 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-233ENST00000642021 IKBKEQ14164 716 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 MAP7Q14244 749 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 TIGD5Q53EQ6 642 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 CLEC6AQ6EIG7 209 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 SLC10A4Q96EP9 437 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 SMARCD1Q96GM5 515 aa13.92□□□□□ -0.18
PHGDH-233ENST00000642021 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
PHGDH-233ENST00000642021 MEAF6Q9HAF1 191 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms