RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CST9Q5W186 159 aa16.95■□□□□ 0.3
PHGDH-223ENST00000641597 METTL23Q86XA0 190 aa16.95■□□□□ 0.3
PHGDH-223ENST00000641597 SPATA2LQ8IUW3 424 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-223ENST00000641597 PSMG2Q969U7 264 aa16.95■□□□□ 0.3
PHGDH-223ENST00000641597 SEMA6AQ9H2E6 1030 aa16.95■□□□□ 0.3
PHGDH-223ENST00000641597 TRPC7Q9HCX4 862 aa16.95■□□□□ 0.3
PHGDH-223ENST00000641597 PDP2Q9P2J9 529 aa16.95■□□□□ 0.3
PHGDH-223ENST00000641597 PTPRDP23468 1912 aa16.95■□□□□ 0.3
PHGDH-223ENST00000641597 H2AFYO75367 372 aaKnown RBP16.94■□□□□ 0.3
PHGDH-223ENST00000641597 PSMD5Q16401 504 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 GPR158Q5T848 1215 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 OGFRL1Q5TC84 451 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-223ENST00000641597 RASIP1Q5U651 963 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 KDELC1Q6UW63 502 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 MIB1Q86YT6 1006 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 KLHDC8BQ8IXV7 354 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 RTL3Q8N8U3 475 aaKnown RBP16.94■□□□□ 0.3
PHGDH-223ENST00000641597 KLHDC9Q8NEP7 349 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 SMOC2Q9H3U7 446 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 ALG9Q9H6U8 611 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 PSMD13Q9UNM6 376 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 UNCXA6NJT0 531 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 CSPG5O95196 566 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 RPL9P32969 192 aaKnown RBP16.94■□□□□ 0.3
PHGDH-223ENST00000641597 GEMP55040 296 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 CDKL1Q00532 357 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 UGP2Q16851 508 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 CNPY1Q3B7I2 92 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 TECRLQ5HYJ1 363 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 C6orf52Q5T4I8 152 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 UGT2A3Q6UWM9 527 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 CYHR1Q6ZMK1 362 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 SPATA24Q86W54 205 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 RYBPQ8N488 228 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-223ENST00000641597 CPSF7Q8N684 471 aaKnown RBP16.94■□□□□ 0.3
PHGDH-223ENST00000641597 C2orf69Q8N8R5 385 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 OR52K2Q8NGK3 314 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 SPPL2BQ8TCT7 592 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 HAPLN3Q96S86 360 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 ABCC13Q9NSE7 274 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 SPATS2LQ9NUQ6 558 aaKnown RBP16.94■□□□□ 0.3
PHGDH-223ENST00000641597 NCKIPSDQ9NZQ3 722 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 APPL1Q9UKG1 709 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 MYO16Q9Y6X6 1858 aa16.94■□□□□ 0.3
PHGDH-223ENST00000641597 IQCA1LA6NCM1 817 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 E7ENX8 843 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 CASQ2O14958 399 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 MMP2P08253 660 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 FGFR3P22607 806 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 HADHAP40939 763 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 YBX1P67809 324 aaKnown RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 POTEHQ6S545 545 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 C16orf89Q6UX73 402 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 SERINC5Q86VE9 423 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 PGBD5Q8N414 524 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 ICA1LQ8NDH6 482 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 HDAC10Q969S8 669 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 SMIM14Q96QK8 99 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 MRPL57Q9BQC6 102 aaKnown RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 CATSPERBQ9H7T0 1116 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 ENTPD7Q9NQZ7 604 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 TRMT13Q9NUP7 481 aaKnown RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 CLIC5Q9NZA1 410 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 RIMS3Q9UJD0 308 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 C15orf38-AP3S2A0A0A6YYH1 394 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 A0A1B0GVG6 124 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 FBP2O00757 339 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 TNPO2O14787 897 aaKnown RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 AHCYL1O43865 530 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 RNASEH2AO75792 299 aaKnown RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 FAM163BP0C2L3 166 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 PMLP29590 882 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 GSTT1P30711 240 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 HUNKP57058 714 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 MGAT3Q09327 533 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 EFEMP1Q12805 493 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 LIN52Q52LA3 116 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 CYP2R1Q6VVX0 501 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 ARPINQ7Z6K5 226 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 PGAM4Q8N0Y7 254 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 IGSF8Q969P0 613 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 ATP6V1E2Q96A05 226 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 CNBD2Q96M20 576 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 C3orf30Q96M34 536 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 TRIM8Q9BZR9 551 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 NSMCE4AQ9NXX6 385 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 MID2Q9UJV3 735 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 PRG3Q9Y2Y8 225 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 FNDC1Q4ZHG4 1894 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-223ENST00000641597 SCN10AQ9Y5Y9 1956 aa16.93■□□□□ 0.3
PHGDH-223ENST00000641597 SPATA31D3P0C874 917 aa16.92■□□□□ 0.3
PHGDH-223ENST00000641597 AKR1A1P14550 325 aa16.92■□□□□ 0.3
PHGDH-223ENST00000641597 NELFEP18615 380 aaKnown RBP16.92■□□□□ 0.3
PHGDH-223ENST00000641597 ATP5F1P24539 256 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-223ENST00000641597 HOXC13P31276 330 aa16.92■□□□□ 0.3
PHGDH-223ENST00000641597 IRX1P78414 480 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-223ENST00000641597 LPIN1Q14693 890 aa16.92■□□□□ 0.3
PHGDH-223ENST00000641597 IL23RQ5VWK5 629 aa16.92■□□□□ 0.3
PHGDH-223ENST00000641597 KIAA0930Q6ICG6 404 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms