RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PSMC3IPQ9P2W1 217 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-221ENST00000641573 LHX3Q9UBR4 397 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 TBK1Q9UHD2 729 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 INTS6Q9UL03 887 aaKnown RBP13.24□□□□□ -0.29
PHGDH-221ENST00000641573 SOX13Q9UN79 622 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 RPS6KL1Q9Y6S9 549 aa13.24□□□□□ -0.29
PHGDH-221ENST00000641573 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
PHGDH-221ENST00000641573 FAM237BA0A1B0GVD1 139 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 LOC285095A0A1B0GVY8 99 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 FAM159BA6NKW6 160 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 INSIG1O15503 277 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 PIAS1O75925 651 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 MT-CO1P00395 513 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 ATP5DP30049 168 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 HLA-FP30511 346 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 SCNN1BP51168 640 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 RHOAP61586 193 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 CDK18Q07002 472 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 RASA2Q15283 850 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 DHCR24Q15392 516 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 EML3Q32P44 896 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 ANKRD20A4Q4UJ75 823 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 PCID2Q5JVF3 399 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 TRMT10BQ6PF06 316 aaKnown RBP13.23□□□□□ -0.29
PHGDH-221ENST00000641573 CYS1Q717R9 158 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 TMEM135Q86UB9 458 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 CTAGE3PQ8IX95 158 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 CYP4X1Q8N118 509 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 ZNF557Q8N988 423 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-221ENST00000641573 PPHLN1Q8NEY8 458 aaKnown RBP13.23□□□□□ -0.29
PHGDH-221ENST00000641573 ZNF669Q96BR6 464 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-221ENST00000641573 IFT43Q96FT9 208 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 FEM1CQ96JP0 617 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 FCRL3Q96P31 734 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-221ENST00000641573 KIFC1Q9BW19 673 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 ARNT2Q9HBZ2 717 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 NOD2Q9HC29 1040 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 SMYD2Q9NRG4 433 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 OBP2AQ9NY56 170 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 MOCS1Q9NZB8 636 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 NCDNQ9UBB6 729 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 WNT16Q9UBV4 365 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 GGA2Q9UJY4 613 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 CDH7Q9ULB5 785 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 FCF1Q9Y324 198 aaKnown RBP13.23□□□□□ -0.29
PHGDH-221ENST00000641573 OTOGLQ3ZCN5 2332 aa13.23□□□□□ -0.29
PHGDH-221ENST00000641573 NUP210Q8TEM1 1887 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-221ENST00000641573 HEPACAM2A8MVW5 462 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 CXorf49A8MYA2 514 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-221ENST00000641573 K7ERQ8 282 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 USP1O94782 785 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 EPOP01588 193 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 CYP17A1P05093 508 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 ATXN1LP0C7T5 689 aaKnown RBP13.22□□□□□ -0.29
PHGDH-221ENST00000641573 SP9P0CG40 484 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 PABPC1P11940 636 aaKnown RBP13.22□□□□□ -0.29
PHGDH-221ENST00000641573 NR1D1P20393 614 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 HPDP32754 393 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-221ENST00000641573 SERPINH1P50454 418 aaKnown RBP13.22□□□□□ -0.29
PHGDH-221ENST00000641573 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 NSUN2Q08J23 767 aaKnown RBP eCLIP13.22□□□□□ -0.29
PHGDH-221ENST00000641573 FRG1Q14331 258 aaKnown RBP13.22□□□□□ -0.29
PHGDH-221ENST00000641573 POU6F1Q14863 301 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 SLC1A5Q15758 541 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 FUT11Q495W5 492 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 SIRPB2Q5JXA9 342 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 TRIM68Q6AZZ1 485 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 PKN3Q6P5Z2 889 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 NCEH1Q6PIU2 408 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 UNC5BQ8IZJ1 945 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 DCAKDQ8WVC6 231 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 SLC44A1Q8WWI5 657 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 TTC17Q96AE7 1141 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 TBC1D17Q9HA65 648 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 CHRAC1Q9NRG0 131 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 FAM169AQ9Y6X4 670 aa13.22□□□□□ -0.29
PHGDH-221ENST00000641573 DOCK8Q8NF50 2099 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 CXorf51AA0A1B0GTR3 108 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 SMAD6O43541 496 aaKnown RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 ADH1CP00326 375 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 FGF1P05230 155 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 INHBAP08476 426 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 ADH5P11766 374 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 HLA-DPA1P20036 260 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 FCARP24071 287 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 ADRA1DP25100 572 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 NMBRP28336 390 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 CTSOP43234 321 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-221ENST00000641573 PPP2R2AP63151 447 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 MGAT5Q09328 741 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 NR1H3Q13133 447 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 DMC1Q14565 340 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 RALGPS1Q5JS13 557 aa13.21□□□□□ -0.29
PHGDH-221ENST00000641573 ATXN7L2Q5T6C5 722 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms