RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TFDP2Q14188 446 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 UGP2Q16851 508 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 PEX26Q7Z412 305 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 CCDC50Q8IVM0 306 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 ARRDC2Q8TBH0 407 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 ATP13A3Q9H7F0 1226 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 DLL3Q9NYJ7 618 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 TPX2Q9ULW0 747 aaKnown RBP26.94■■□□□ 1.9
VEGFA-231ENST00000640499 CA5BQ9Y2D0 317 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 ATP8A1Q9Y2Q0 1164 aa26.94■■□□□ 1.9
VEGFA-231ENST00000640499 TM4SF5O14894 197 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 SLC31A1O15431 190 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 TSPAN6O43657 245 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 JCHAINP01591 159 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 SERPINA4P29622 427 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 AFF3P51826 1226 aaKnown RBP26.93■■□□□ 1.9
VEGFA-231ENST00000640499 RWDD2BP57060 319 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 IFI35P80217 286 aaPredicted RBP26.93■■□□□ 1.9
VEGFA-231ENST00000640499 BCL2L1Q07817 233 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 NIPAL4Q0D2K0 466 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 TRAF2Q12933 501 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 PDK1Q15118 436 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 KIF19Q2TAC6 998 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 BBS12Q6ZW61 710 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 NETO1Q8TDF5 533 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 HES6Q96HZ4 224 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 SERAC1Q96JX3 654 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 SEMA3CQ99985 751 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 PCDH12Q9NPG4 1184 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 SCUBE2Q9NQ36 999 aa26.93■■□□□ 1.9
VEGFA-231ENST00000640499 IGLON5A6NGN9 336 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 C4orf47A7E2U8 309 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 CCDC175P0C221 793 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 TGM2P21980 687 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 PTPN7P35236 360 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 MAPK8P45983 427 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 GRIA4P48058 902 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 NR2C2P49116 596 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 COPS2P61201 443 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 SEMG2Q02383 582 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 DSC2Q02487 901 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 PRKD1Q15139 912 aaPredicted RBP26.92■■□□□ 1.9
VEGFA-231ENST00000640499 BRAT1Q6PJG6 821 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 SYCE1Q8N0S2 351 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 BBS5Q8N3I7 341 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 TMEM145Q8NBT3 493 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 SPOCK2Q92563 424 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 FEM1CQ96JP0 617 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 PDLIM2Q96JY6 352 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 ZNF830Q96NB3 372 aaPredicted RBP26.92■■□□□ 1.9
VEGFA-231ENST00000640499 C1QTNF2Q9BXJ5 285 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 TSGA10Q9BZW7 698 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 KCNF1Q9H3M0 494 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 FZD3Q9NPG1 666 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 DMTF1Q9Y222 760 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 LRRK1Q38SD2 2015 aa26.92■■□□□ 1.9
VEGFA-231ENST00000640499 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.91■■□□□ 1.9
VEGFA-231ENST00000640499 UPK3BL1B0FP48 263 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 UPK3BL2E5RIL1 263 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 RIOK3O14730 519 aaKnown RBP26.91■■□□□ 1.9
VEGFA-231ENST00000640499 SLC30A4O14863 429 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 VILLO15195 856 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 RAD51BO15315 384 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 KRT86O43790 486 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 RPS21P63220 83 aaKnown RBP26.91■■□□□ 1.9
VEGFA-231ENST00000640499 AP1B1Q10567 949 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 TMEM52BQ4KMG9 183 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 NAPEPLDQ6IQ20 393 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 KIAA1161Q6NSJ0 714 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 HAUS1Q96CS2 278 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 KLF6Q99612 283 aaPredicted RBP26.91■■□□□ 1.9
VEGFA-231ENST00000640499 GTPBP2Q9BX10 602 aaKnown RBP26.91■■□□□ 1.9
VEGFA-231ENST00000640499 SLC17A9Q9BYT1 436 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 OSBPL8Q9BZF1 889 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 IL21RQ9HBE5 538 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 LZTFL1Q9NQ48 299 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 EFR3BQ9Y2G0 817 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 ANKRD6Q9Y2G4 727 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 SNX11Q9Y5W9 270 aa26.91■■□□□ 1.9
VEGFA-231ENST00000640499 TMEM131Q92545 1883 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 MMP20O60882 483 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 PAK4O96013 591 aaPredicted RBP26.9■■□□□ 1.9
VEGFA-231ENST00000640499 MMP2P08253 660 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 NUDT1P36639 197 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 ZNF211Q13398 564 aaPredicted RBP26.9■■□□□ 1.9
VEGFA-231ENST00000640499 SETMARQ53H47 684 aaPredicted RBP26.9■■□□□ 1.9
VEGFA-231ENST00000640499 RALGPS1Q5JS13 557 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 MINDY1Q8N5J2 469 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 MYOCQ99972 504 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 CEP41Q9BYV8 373 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 TMEM9BQ9NQ34 198 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 AMACRQ9UHK6 382 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 PPP2R2CQ9Y2T4 447 aa26.9■■□□□ 1.9
VEGFA-231ENST00000640499 ASCC3Q8N3C0 2202 aaKnown RBP26.89■■□□□ 1.9
VEGFA-231ENST00000640499 PRAMEF26H0Y7S4 382 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 KCNK3O14649 394 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 FZD6O60353 706 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 SYPP08247 313 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 CD38P28907 300 aa26.89■■□□□ 1.9
VEGFA-231ENST00000640499 SUOXP51687 545 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms