RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 H2AFZP0C0S5 128 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 SERPINB6P35237 376 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 SCNN1BP51168 640 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 RENBPP51606 427 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 BCL2L1Q07817 233 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 PDE1CQ14123 709 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 FZD2Q14332 565 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ZNF235Q14590 738 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 UGP2Q16851 508 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 TMEM52BQ4KMG9 183 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 HS1BP3Q53T59 392 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ERAP2Q6P179 960 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 CCNI2Q6ZMN8 369 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 H2AFVQ71UI9 128 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 TMPRSS7Q7RTY8 843 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 GALNT15Q8N3T1 639 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 SLC25A45Q8N413 288 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ATPAF2Q8N5M1 289 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 KDF1Q8NAX2 398 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ZCCHC14Q8WYQ9 949 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 TSC1Q92574 1164 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 IFT43Q96FT9 208 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ZNF599Q96NL3 588 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 CAAP1Q9H8G2 361 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 GPR27Q9NS67 375 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ABHD10Q9NUJ1 306 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 UVRAGQ9P2Y5 699 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ZMIZ1Q9ULJ6 1067 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 ANKRD36A6QL64 1941 aa16.91■□□□□ 0.3
CACNA1A-259ENST00000638114 PLXNB3Q9ULL4 1909 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 SPTY2D1-AS1A0A0U1RR47 76 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 TRIM38O00635 465 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 MUSKO15146 869 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 SIGLEC6O43699 453 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 AKR1B10O60218 316 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 MFAP3LO75121 409 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 RFPL3O75679 317 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 PROSCO94903 275 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 PRKCGP05129 697 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 IGFALSP35858 605 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 ACADVLP49748 655 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 ADKP55263 362 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 PFN3P60673 137 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 HNRNPKP61978 463 aaKnown RBP eCLIP16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 NSUN2Q08J23 767 aaKnown RBP eCLIP16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 SLC10A7Q0GE19 358 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 MMRN1Q13201 1228 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 ASTE1Q2TB18 679 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 PARGQ86W56 976 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 ZSWIM9Q86XI8 627 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 CPNE8Q86YQ8 564 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 CENPTQ96BT3 561 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 PSKH2Q96QS6 385 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 RCOR3Q9P2K3 495 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 ATP8A1Q9Y2Q0 1164 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 COQ6Q9Y2Z9 468 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 PCDHGA1Q9Y5H4 931 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 ASPMQ8IZT6 3477 aa16.9■□□□□ 0.3
CACNA1A-259ENST00000638114 GOLGA4Q13439 2230 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 TMEM110-MUSTN1A8MSY1 372 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 H3BM21 787 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 MAFKO60675 156 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 KRT37O76014 449 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 CD48P09326 243 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 C6P13671 934 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 CKMT2P17540 419 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 MMP12P39900 470 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 THOP1P52888 689 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 AP1S1P61966 158 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 SEMG2Q02383 582 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 ATP13A4Q4VNC1 1196 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 TPRG1LQ5T0D9 272 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 MARCH9Q86YJ5 346 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 BBS5Q8N3I7 341 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 TP53I13Q8NBR0 393 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 OR4C6Q8NH72 309 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 NSMCE1Q8WV22 266 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 CHP1Q99653 195 aa16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 MBNL1Q9NR56 388 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-259ENST00000638114 SHROOM3Q8TF72 1996 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 LRRK1Q38SD2 2015 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 TTC24A2A3L6 582 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 FAM149AA5PLN7 773 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 NEMP2A6NFY4 417 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 PEX11BO96011 259 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 CSF2P04141 144 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 C1SP09871 688 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 TMEM253P0C7T8 217 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 ALPPL2P10696 532 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 NME1P15531 152 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 HSPA9P38646 679 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 LIG3P49916 1009 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 DAB2P98082 770 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 ZNF211Q13398 564 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 DPYSL3Q14195 570 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 PTK2BQ14289 1009 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 IRF4Q15306 451 aa16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 SMAD1Q15797 465 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-259ENST00000638114 PROX2Q3B8N5 592 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms