RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 UPP2O95045 317 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 GJB5O95377 273 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 CPOXP36551 454 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 ALDH7A1P49419 539 aaKnown RBP21.66■■□□□ 1.06
CLN6-224ENST00000638076 PRAMEP78395 509 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 CSHL1Q14406 222 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 SLC8B1Q6J4K2 584 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 SPNS2Q8IVW8 549 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 ULK2Q8IYT8 1036 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 ZNF296Q8WUU4 475 aaPredicted RBP21.66■■□□□ 1.06
CLN6-224ENST00000638076 MRPL57Q9BQC6 102 aaKnown RBP21.66■■□□□ 1.06
CLN6-224ENST00000638076 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.66■■□□□ 1.06
CLN6-224ENST00000638076 DCXO43602 365 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 LDB2O43679 373 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 KRT36O76013 467 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 CLCN5P51795 746 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 COPAP53621 1224 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 USP41Q3LFD5 358 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 C5orf22Q49AR2 442 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 TLDC1Q6P9B6 456 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 LDB1Q86U70 411 aaPredicted RBP21.66■■□□□ 1.06
CLN6-224ENST00000638076 PHTF2Q8N3S3 785 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 SGF29Q96ES7 293 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 OR52B2Q96RD2 323 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 SHCBP1LQ9BZQ2 653 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 UNC93B1Q9H1C4 597 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 MFSD1Q9H3U5 465 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 TCF7L2Q9NQB0 619 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 IGSF5Q9NSI5 407 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 MTRRQ9UBK8 725 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 ZDHHC2Q9UIJ5 367 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 ACTL7AQ9Y615 435 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 ZFP37Q9Y6Q3 630 aaPredicted RBP21.66■■□□□ 1.06
CLN6-224ENST00000638076 OR51F1A6NGY5 319 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 HDAC3O15379 428 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 ZBTB14O43829 449 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 TUFMP49411 452 aaKnown RBP21.65■■□□□ 1.06
CLN6-224ENST00000638076 KPNA2P52292 529 aaKnown RBP21.65■■□□□ 1.06
CLN6-224ENST00000638076 SLC25A3Q00325 362 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 PRKAA1Q13131 559 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 SEL1L3Q68CR1 1132 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 LSMEM2Q8N112 164 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 PPP1R36Q96LQ0 422 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 LBHD1Q9BQE6 289 aaPredicted RBP21.65■■□□□ 1.06
CLN6-224ENST00000638076 SCN5AQ14524 2016 aa21.65■■□□□ 1.06
CLN6-224ENST00000638076 GOLGA8QA0A0J9YX86 632 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 GOLGA8OA6NCC3 632 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 GOLGA8NF8WBI6 632 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 FKTNO75072 461 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 TFEBP19484 476 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 PTDSS1P48651 473 aaKnown RBP21.64■■□□□ 1.06
CLN6-224ENST00000638076 RCN1Q15293 331 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 FSCBQ5H9T9 825 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 RNF135Q8IUD6 432 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 CCNYL1Q8N7R7 359 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 OR7D4Q8NG98 312 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 OR52K2Q8NGK3 314 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 BLOC1S5Q8TDH9 187 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 CMTM5Q96DZ9 223 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 FEM1CQ96JP0 617 aa21.64■■□□□ 1.06
CLN6-224ENST00000638076 WDR55Q9H6Y2 383 aaPredicted RBP21.64■■□□□ 1.06
CLN6-224ENST00000638076 PSMG1O95456 288 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 HOXD9P28356 352 aaPredicted RBP21.64■■□□□ 1.05
CLN6-224ENST00000638076 SLC11A2P49281 568 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 GNA12Q03113 381 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 ASPHQ12797 758 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 GALNT3Q14435 633 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 FAM83EQ2M2I3 478 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 HECTD2Q5U5R9 776 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 METTL21CQ5VZV1 264 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 IL31Q6EBC2 164 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 DEFB128Q7Z7B8 93 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 DENND1CQ8IV53 801 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 TXNDC5Q8NBS9 432 aaKnown RBP21.64■■□□□ 1.05
CLN6-224ENST00000638076 STMN2Q93045 179 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 ZNF599Q96NL3 588 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 MARCH4Q9P2E8 410 aaPredicted RBP21.64■■□□□ 1.05
CLN6-224ENST00000638076 ARL5AQ9Y689 179 aa21.64■■□□□ 1.05
CLN6-224ENST00000638076 ZNF840PA6NDX5 716 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 NEMP1O14524 444 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 COCHO43405 550 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 HLA-DPA1P20036 260 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 NET1Q7Z628 596 aaPredicted RBP21.63■■□□□ 1.05
CLN6-224ENST00000638076 GALNT7Q86SF2 657 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 PDZD8Q8NEN9 1154 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 VN1R3Q9BXE9 311 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 PPP1R12CQ9BZL4 782 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 MAGEH1Q9H213 219 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 HIPK3Q9H422 1215 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 SUDS3Q9H7L9 328 aaPredicted RBP21.63■■□□□ 1.05
CLN6-224ENST00000638076 GPAMQ9HCL2 828 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.63■■□□□ 1.05
CLN6-224ENST00000638076 SLC7A8Q9UHI5 535 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 LOC100653049A0A140TA62 436 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 BUD23O43709 281 aaKnown RBP21.63■■□□□ 1.05
CLN6-224ENST00000638076 CIB2O75838 187 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 KRT34O76011 436 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 EFEMP2O95967 443 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 FGF1P05230 155 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 HK2P52789 917 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms